RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 MKRN1Q9UHC7 482 aaKnown RBP30.18■■■□□ 2.42
SMAD5-207ENST00000511116 NTSR2O95665 410 aa30.17■■■□□ 2.42
SMAD5-207ENST00000511116 MYL6BP14649 208 aa30.17■■■□□ 2.42
SMAD5-207ENST00000511116 GRIPAP1Q4V328 841 aa30.17■■■□□ 2.42
SMAD5-207ENST00000511116 SUSD4Q5VX71 490 aa30.17■■■□□ 2.42
SMAD5-207ENST00000511116 GIGYF2Q6Y7W6 1299 aaKnown RBP30.17■■■□□ 2.42
SMAD5-207ENST00000511116 EPHX2P34913 555 aa30.16■■■□□ 2.42
SMAD5-207ENST00000511116 CRAMP1Q96RY5 1269 aa30.16■■■□□ 2.42
SMAD5-207ENST00000511116 ZBTB3Q9H5J0 574 aa30.16■■■□□ 2.42
SMAD5-207ENST00000511116 GPTP24298 496 aa30.15■■■□□ 2.42
SMAD5-207ENST00000511116 PNMA8AQ86V59 439 aaPredicted RBP30.15■■■□□ 2.42
SMAD5-207ENST00000511116 MAPK8IP3Q9UPT6 1336 aa30.15■■■□□ 2.42
SMAD5-207ENST00000511116 PDIA6Q15084 440 aa30.14■■■□□ 2.42
SMAD5-207ENST00000511116 RPGRQ92834 1020 aaKnown RBP30.14■■■□□ 2.42
SMAD5-207ENST00000511116 RNF123Q5XPI4 1314 aa30.14■■■□□ 2.42
SMAD5-207ENST00000511116 JDP2Q8WYK2 163 aa30.13■■■□□ 2.41
SMAD5-207ENST00000511116 BABAM1Q9NWV8 329 aa30.13■■■□□ 2.41
SMAD5-207ENST00000511116 TMEM88BA6NKF7 163 aa30.12■■■□□ 2.41
SMAD5-207ENST00000511116 PARP10Q53GL7 1025 aa30.12■■■□□ 2.41
SMAD5-207ENST00000511116 EAPPQ56P03 285 aaPredicted RBP30.12■■■□□ 2.41
SMAD5-207ENST00000511116 TSPYL4Q9UJ04 414 aa30.11■■■□□ 2.41
SMAD5-207ENST00000511116 LTBP1Q14766 1721 aa30.1■■■□□ 2.41
SMAD5-207ENST00000511116 C3orf67Q6ZVT6 689 aa30.1■■■□□ 2.41
SMAD5-207ENST00000511116 RBM17Q96I25 401 aaKnown RBP30.1■■■□□ 2.41
SMAD5-207ENST00000511116 SLC10A5Q5PT55 438 aa30.09■■■□□ 2.41
SMAD5-207ENST00000511116 PPP1R42Q7Z4L9 355 aa30.09■■■□□ 2.41
SMAD5-207ENST00000511116 SLC51AQ86UW1 340 aa30.08■■■□□ 2.41
SMAD5-207ENST00000511116 CNTROBQ8N137 903 aa30.08■■■□□ 2.41
SMAD5-207ENST00000511116 PPEF1O14829 653 aaPredicted RBP30.07■■■□□ 2.4
SMAD5-207ENST00000511116 EIF6P56537 245 aaKnown RBP30.07■■■□□ 2.4
SMAD5-207ENST00000511116 CLEC11AQ9Y240 323 aa30.07■■■□□ 2.4
SMAD5-207ENST00000511116 VEGFBP49765 207 aa30.06■■■□□ 2.4
SMAD5-207ENST00000511116 RIPK4P57078 832 aa30.06■■■□□ 2.4
SMAD5-207ENST00000511116 RASSF10A6NK89 507 aa30.05■■■□□ 2.4
SMAD5-207ENST00000511116 SCNN1DP51172 638 aa30.05■■■□□ 2.4
SMAD5-207ENST00000511116 PROSER3Q2NL68 480 aa30.05■■■□□ 2.4
SMAD5-207ENST00000511116 MAP1SQ66K74 1059 aaPredicted RBP30.05■■■□□ 2.4
SMAD5-207ENST00000511116 ANKRD36CQ5JPF3 1778 aa30.05■■■□□ 2.4
SMAD5-207ENST00000511116 FOXN1O15353 648 aa30.04■■■□□ 2.4
SMAD5-207ENST00000511116 RALBP1Q15311 655 aa30.04■■■□□ 2.4
SMAD5-207ENST00000511116 LARGE2Q8N3Y3 721 aa30.04■■■□□ 2.4
SMAD5-207ENST00000511116 NLRP3Q96P20 1036 aa30.04■■■□□ 2.4
SMAD5-207ENST00000511116 VPS33BQ9H267 617 aa30.04■■■□□ 2.4
SMAD5-207ENST00000511116 TMPOP42166 694 aaKnown RBP30.03■■■□□ 2.4
SMAD5-207ENST00000511116 UTP14AQ9BVJ6 771 aaKnown RBP30.03■■■□□ 2.4
SMAD5-207ENST00000511116 ATP6V0A2Q9Y487 856 aa30.03■■■□□ 2.4
SMAD5-207ENST00000511116 CAPN15O75808 1086 aa30.02■■■□□ 2.4
SMAD5-207ENST00000511116 PRDM10Q9NQV6 1147 aa30.02■■■□□ 2.4
SMAD5-207ENST00000511116 LAMB2P55268 1798 aa30.01■■■□□ 2.39
SMAD5-207ENST00000511116 EIF2S2P20042 333 aaKnown RBP30.01■■■□□ 2.39
SMAD5-207ENST00000511116 LMOD3Q0VAK6 560 aa30.01■■■□□ 2.39
SMAD5-207ENST00000511116 RTFDC1Q9BY42 306 aaPredicted RBP30.01■■■□□ 2.39
SMAD5-207ENST00000511116 GJA3Q9Y6H8 435 aa30.01■■■□□ 2.39
SMAD5-207ENST00000511116 ANXA1P04083 346 aa30■■■□□ 2.39
SMAD5-207ENST00000511116 WBP1LQ9NX94 342 aa30■■■□□ 2.39
SMAD5-207ENST00000511116 ABCC4O15439 1325 aa29.99■■■□□ 2.39
SMAD5-207ENST00000511116 LMOD1P29536 600 aaPredicted RBP29.99■■■□□ 2.39
SMAD5-207ENST00000511116 EPS15P42566 896 aa29.99■■■□□ 2.39
SMAD5-207ENST00000511116 HSP90AB3PQ58FF7 597 aa29.98■■■□□ 2.39
SMAD5-207ENST00000511116 NLRP10Q86W26 655 aa29.98■■■□□ 2.39
SMAD5-207ENST00000511116 NIM1KQ8IY84 436 aa29.98■■■□□ 2.39
SMAD5-207ENST00000511116 DDX21Q9NR30 783 aaKnown RBP eCLIP29.98■■■□□ 2.39
SMAD5-207ENST00000511116 DEFB115Q30KQ5 88 aa29.97■■■□□ 2.39
SMAD5-207ENST00000511116 USP50Q70EL3 339 aaPredicted RBP29.97■■■□□ 2.39
SMAD5-207ENST00000511116 COPS6Q7L5N1 327 aa29.97■■■□□ 2.39
SMAD5-207ENST00000511116 CHL1O00533 1208 aa29.96■■■□□ 2.39
SMAD5-207ENST00000511116 TCERG1O14776 1098 aaKnown RBP29.96■■■□□ 2.39
SMAD5-207ENST00000511116 PPIP5K2O43314 1243 aa29.96■■■□□ 2.39
SMAD5-207ENST00000511116 BBOX1O75936 387 aa29.96■■■□□ 2.39
SMAD5-207ENST00000511116 CTCFP49711 727 aaPredicted RBP29.96■■■□□ 2.39
SMAD5-207ENST00000511116 THSD7BQ9C0I4 1608 aa29.96■■■□□ 2.39
SMAD5-207ENST00000511116 TCIRG1Q13488 830 aa29.95■■■□□ 2.39
SMAD5-207ENST00000511116 AOC3Q16853 763 aa29.95■■■□□ 2.39
SMAD5-207ENST00000511116 XAGE3Q8WTP9 111 aa29.95■■■□□ 2.39
SMAD5-207ENST00000511116 SP8Q8IXZ3 490 aa29.94■■■□□ 2.38
SMAD5-207ENST00000511116 SUPT20HQ8NEM7 779 aa29.94■■■□□ 2.38
SMAD5-207ENST00000511116 AIDAQ96BJ3 306 aa29.93■■■□□ 2.38
SMAD5-207ENST00000511116 TMX4Q9H1E5 349 aaPredicted RBP29.93■■■□□ 2.38
SMAD5-207ENST00000511116 GPRC5DQ9NZD1 345 aa29.93■■■□□ 2.38
SMAD5-207ENST00000511116 ZNRF3Q9ULT6 936 aa29.93■■■□□ 2.38
SMAD5-207ENST00000511116 TRPM7Q96QT4 1865 aa29.93■■■□□ 2.38
SMAD5-207ENST00000511116 WDR33Q9C0J8 1336 aaKnown RBP29.92■■■□□ 2.38
SMAD5-207ENST00000511116 HCLS1P14317 486 aaPredicted RBP29.91■■■□□ 2.38
SMAD5-207ENST00000511116 CXCL9Q07325 125 aa29.91■■■□□ 2.38
SMAD5-207ENST00000511116 TRIM35Q9UPQ4 493 aa29.91■■■□□ 2.38
SMAD5-207ENST00000511116 SH3TC1Q8TE82 1336 aa29.91■■■□□ 2.38
SMAD5-207ENST00000511116 LRRC37AA6NMS7 1700 aa29.91■■■□□ 2.38
SMAD5-207ENST00000511116 KIAA2012Q0VF49 1180 aa29.9■■■□□ 2.38
SMAD5-207ENST00000511116 AIMP1Q12904 312 aaKnown RBP29.9■■■□□ 2.38
SMAD5-207ENST00000511116 ADARB2Q9NS39 739 aaKnown RBP29.9■■■□□ 2.38
SMAD5-207ENST00000511116 MYBBP1AQ9BQG0 1328 aaKnown RBP29.9■■■□□ 2.38
SMAD5-207ENST00000511116 DUOX1Q9NRD9 1551 aa29.9■■■□□ 2.38
SMAD5-207ENST00000511116 HOXB7P09629 217 aa29.89■■■□□ 2.38
SMAD5-207ENST00000511116 FMR1Q06787 632 aaKnown RBP eCLIP29.89■■■□□ 2.38
SMAD5-207ENST00000511116 GRAPQ13588 217 aa29.89■■■□□ 2.38
SMAD5-207ENST00000511116 KRT24Q2M2I5 525 aa29.89■■■□□ 2.38
SMAD5-207ENST00000511116 GRAPLQ8TC17 118 aaPredicted RBP29.89■■■□□ 2.38
SMAD5-207ENST00000511116 NECTIN2Q92692 538 aa29.89■■■□□ 2.38
SMAD5-207ENST00000511116 TRMT112Q9UI30 125 aaKnown RBP29.89■■■□□ 2.38
SMAD5-207ENST00000511116 ABT1Q9ULW3 272 aaKnown RBP29.89■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms