RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 PPP1R42Q7Z4L9 355 aa10.97□□□□□ -0.65
TRIO-217ENST00000511019 ZNF34Q8IZ26 560 aa10.97□□□□□ -0.65
TRIO-217ENST00000511019 PSMD1Q99460 953 aa10.97□□□□□ -0.65
TRIO-217ENST00000511019 TSPYL4Q9UJ04 414 aa10.97□□□□□ -0.65
TRIO-217ENST00000511019 FER1L6Q2WGJ9 1857 aa10.97□□□□□ -0.65
TRIO-217ENST00000511019 COL11A2P13942 1736 aaPredicted RBP10.96□□□□□ -0.65
TRIO-217ENST00000511019 TIAM2Q8IVF5 1701 aa10.96□□□□□ -0.65
TRIO-217ENST00000511019 ERBB4Q15303 1308 aa10.96□□□□□ -0.65
TRIO-217ENST00000511019 ZNF541Q9H0D2 1346 aa10.96□□□□□ -0.65
TRIO-217ENST00000511019 TMEM88BA6NKF7 163 aa10.96□□□□□ -0.65
TRIO-217ENST00000511019 TCERG1O14776 1098 aaKnown RBP10.96□□□□□ -0.65
TRIO-217ENST00000511019 ITGBL1O95965 494 aaPredicted RBP10.96□□□□□ -0.65
TRIO-217ENST00000511019 PARP10Q53GL7 1025 aa10.96□□□□□ -0.65
TRIO-217ENST00000511019 GPC2Q8N158 579 aa10.96□□□□□ -0.65
TRIO-217ENST00000511019 NLRP3Q96P20 1036 aa10.96□□□□□ -0.65
TRIO-217ENST00000511019 CRAMP1Q96RY5 1269 aa10.96□□□□□ -0.65
TRIO-217ENST00000511019 GJA3Q9Y6H8 435 aa10.96□□□□□ -0.65
TRIO-217ENST00000511019 PASKQ96RG2 1323 aa10.95□□□□□ -0.66
TRIO-217ENST00000511019 CAPN15O75808 1086 aa10.95□□□□□ -0.66
TRIO-217ENST00000511019 SLC10A5Q5PT55 438 aa10.95□□□□□ -0.66
TRIO-217ENST00000511019 CNTROBQ8N137 903 aa10.95□□□□□ -0.66
TRIO-217ENST00000511019 BABAM1Q9NWV8 329 aa10.95□□□□□ -0.66
TRIO-217ENST00000511019 BCORQ6W2J9 1755 aa10.95□□□□□ -0.66
TRIO-217ENST00000511019 RNF123Q5XPI4 1314 aa10.94□□□□□ -0.66
TRIO-217ENST00000511019 UBN2Q6ZU65 1347 aa10.94□□□□□ -0.66
TRIO-217ENST00000511019 RALBP1Q15311 655 aa10.94□□□□□ -0.66
TRIO-217ENST00000511019 LARGE2Q8N3Y3 721 aa10.94□□□□□ -0.66
TRIO-217ENST00000511019 UTP14AQ9BVJ6 771 aaKnown RBP10.94□□□□□ -0.66
TRIO-217ENST00000511019 DICER1Q9UPY3 1922 aaKnown RBP10.94□□□□□ -0.66
TRIO-217ENST00000511019 ABCC12Q96J65 1359 aa10.93□□□□□ -0.66
TRIO-217ENST00000511019 PPEF1O14829 653 aaPredicted RBP10.93□□□□□ -0.66
TRIO-217ENST00000511019 NTSR2O95665 410 aa10.93□□□□□ -0.66
TRIO-217ENST00000511019 LMOD1P29536 600 aaPredicted RBP10.93□□□□□ -0.66
TRIO-217ENST00000511019 TMPOP42166 694 aaKnown RBP10.93□□□□□ -0.66
TRIO-217ENST00000511019 LMOD3Q0VAK6 560 aa10.93□□□□□ -0.66
TRIO-217ENST00000511019 PDIA6Q15084 440 aa10.93□□□□□ -0.66
TRIO-217ENST00000511019 HSP90AB3PQ58FF7 597 aa10.93□□□□□ -0.66
TRIO-217ENST00000511019 MAP1SQ66K74 1059 aaPredicted RBP10.93□□□□□ -0.66
TRIO-217ENST00000511019 VPS33BQ9H267 617 aa10.93□□□□□ -0.66
TRIO-217ENST00000511019 CNTNAP1P78357 1384 aa10.92□□□□□ -0.66
TRIO-217ENST00000511019 IBTKQ9P2D0 1353 aaPredicted RBP10.92□□□□□ -0.66
TRIO-217ENST00000511019 BBOX1O75936 387 aa10.92□□□□□ -0.66
TRIO-217ENST00000511019 VEGFBP49765 207 aa10.92□□□□□ -0.66
TRIO-217ENST00000511019 AIMP1Q12904 312 aaKnown RBP10.92□□□□□ -0.66
TRIO-217ENST00000511019 NEUROD2Q15784 382 aa10.92□□□□□ -0.66
TRIO-217ENST00000511019 DEFB115Q30KQ5 88 aa10.92□□□□□ -0.66
TRIO-217ENST00000511019 COPS6Q7L5N1 327 aa10.92□□□□□ -0.66
TRIO-217ENST00000511019 ATP6V0A2Q9Y487 856 aa10.92□□□□□ -0.66
TRIO-217ENST00000511019 PPIP5K2O43314 1243 aa10.91□□□□□ -0.66
TRIO-217ENST00000511019 ANXA1P04083 346 aa10.91□□□□□ -0.66
TRIO-217ENST00000511019 C3orf67Q6ZVT6 689 aa10.91□□□□□ -0.66
TRIO-217ENST00000511019 LRP10Q7Z4F1 713 aa10.91□□□□□ -0.66
TRIO-217ENST00000511019 SP8Q8IXZ3 490 aa10.91□□□□□ -0.66
TRIO-217ENST00000511019 NIM1KQ8IY84 436 aa10.91□□□□□ -0.66
TRIO-217ENST00000511019 SUPT20HQ8NEM7 779 aa10.91□□□□□ -0.66
TRIO-217ENST00000511019 NECTIN2Q92692 538 aa10.91□□□□□ -0.66
TRIO-217ENST00000511019 AIDAQ96BJ3 306 aa10.91□□□□□ -0.66
TRIO-217ENST00000511019 LAS1LQ9Y4W2 734 aaKnown RBP10.91□□□□□ -0.66
TRIO-217ENST00000511019 ARFGEF2Q9Y6D5 1785 aa10.9□□□□□ -0.66
TRIO-217ENST00000511019 CACNA1SQ13698 1873 aa10.9□□□□□ -0.66
TRIO-217ENST00000511019 EPS15P42566 896 aa10.9□□□□□ -0.66
TRIO-217ENST00000511019 TCIRG1Q13488 830 aa10.9□□□□□ -0.66
TRIO-217ENST00000511019 PROSER3Q2NL68 480 aa10.9□□□□□ -0.66
TRIO-217ENST00000511019 USP50Q70EL3 339 aaPredicted RBP10.9□□□□□ -0.66
TRIO-217ENST00000511019 NLRP10Q86W26 655 aa10.9□□□□□ -0.66
TRIO-217ENST00000511019 XAGE3Q8WTP9 111 aa10.9□□□□□ -0.66
TRIO-217ENST00000511019 DDX21Q9NR30 783 aaKnown RBP eCLIP10.9□□□□□ -0.66
TRIO-217ENST00000511019 TRMT112Q9UI30 125 aaKnown RBP10.9□□□□□ -0.66
TRIO-217ENST00000511019 ABT1Q9ULW3 272 aaKnown RBP10.9□□□□□ -0.66
TRIO-217ENST00000511019 RIC1Q4ADV7 1423 aa10.9□□□□□ -0.66
TRIO-217ENST00000511019 SCN4AP35499 1836 aa10.89□□□□□ -0.67
TRIO-217ENST00000511019 RASSF10A6NK89 507 aa10.89□□□□□ -0.67
TRIO-217ENST00000511019 CHL1O00533 1208 aa10.89□□□□□ -0.67
TRIO-217ENST00000511019 FOXN1O15353 648 aa10.89□□□□□ -0.67
TRIO-217ENST00000511019 HCLS1P14317 486 aaPredicted RBP10.89□□□□□ -0.67
TRIO-217ENST00000511019 CTCFP49711 727 aaPredicted RBP10.89□□□□□ -0.67
TRIO-217ENST00000511019 SCNN1DP51172 638 aa10.89□□□□□ -0.67
TRIO-217ENST00000511019 DDX10Q13206 875 aaKnown RBP10.89□□□□□ -0.67
TRIO-217ENST00000511019 AOC3Q16853 763 aa10.89□□□□□ -0.67
TRIO-217ENST00000511019 DPP8Q6V1X1 898 aaPredicted RBP10.89□□□□□ -0.67
TRIO-217ENST00000511019 DDX46Q7L014 1031 aaKnown RBP10.89□□□□□ -0.67
TRIO-217ENST00000511019 CCDC146Q8IYE0 955 aa10.89□□□□□ -0.67
TRIO-217ENST00000511019 MPNDQ8N594 471 aa10.89□□□□□ -0.67
TRIO-217ENST00000511019 PRDM10Q9NQV6 1147 aa10.89□□□□□ -0.67
TRIO-217ENST00000511019 ZNRF3Q9ULT6 936 aa10.89□□□□□ -0.67
TRIO-217ENST00000511019 SNED1Q8TER0 1413 aa10.89□□□□□ -0.67
TRIO-217ENST00000511019 SH3TC1Q8TE82 1336 aa10.88□□□□□ -0.67
TRIO-217ENST00000511019 WDR43Q15061 677 aaKnown RBP eCLIP10.88□□□□□ -0.67
TRIO-217ENST00000511019 RUNDC1Q96C34 613 aa10.88□□□□□ -0.67
TRIO-217ENST00000511019 RTFDC1Q9BY42 306 aaPredicted RBP10.88□□□□□ -0.67
TRIO-217ENST00000511019 WBP1LQ9NX94 342 aa10.88□□□□□ -0.67
TRIO-217ENST00000511019 KDM3BQ7LBC6 1761 aa10.88□□□□□ -0.67
TRIO-217ENST00000511019 ABCC4O15439 1325 aa10.87□□□□□ -0.67
TRIO-217ENST00000511019 WDR33Q9C0J8 1336 aaKnown RBP10.87□□□□□ -0.67
TRIO-217ENST00000511019 MAP2K1Q02750 393 aaPredicted RBP10.87□□□□□ -0.67
TRIO-217ENST00000511019 CXCL9Q07325 125 aa10.87□□□□□ -0.67
TRIO-217ENST00000511019 GRAPQ13588 217 aa10.87□□□□□ -0.67
TRIO-217ENST00000511019 TNIP1Q15025 636 aa10.87□□□□□ -0.67
TRIO-217ENST00000511019 KRT24Q2M2I5 525 aa10.87□□□□□ -0.67
TRIO-217ENST00000511019 ANKRD13DQ6ZTN6 518 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms