RNA–Protein interactions for RNA: ENST00000510710.3

COL1A1-212, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,147 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-212ENST00000510710 GPC2Q8N158 579 aa19.7■□□□□ 0.74
COL1A1-212ENST00000510710 PLEKHF1Q96S99 279 aa19.7■□□□□ 0.74
COL1A1-212ENST00000510710 THUMPD2Q9BTF0 503 aaKnown RBP19.7■□□□□ 0.74
COL1A1-212ENST00000510710 PNNQ9H307 717 aaKnown RBP19.7■□□□□ 0.74
COL1A1-212ENST00000510710 ZBTB3Q9H5J0 574 aa19.7■□□□□ 0.74
COL1A1-212ENST00000510710 SUSD4Q5VX71 490 aa19.69■□□□□ 0.74
COL1A1-212ENST00000510710 CNTROBQ8N137 903 aa19.69■□□□□ 0.74
COL1A1-212ENST00000510710 RBM17Q96I25 401 aaKnown RBP19.69■□□□□ 0.74
COL1A1-212ENST00000510710 KDM3BQ7LBC6 1761 aa19.69■□□□□ 0.74
COL1A1-212ENST00000510710 HOXA10P31260 410 aaPredicted RBP19.68■□□□□ 0.74
COL1A1-212ENST00000510710 VEGFBP49765 207 aa19.68■□□□□ 0.74
COL1A1-212ENST00000510710 GRIPAP1Q4V328 841 aa19.68■□□□□ 0.74
COL1A1-212ENST00000510710 MAP1SQ66K74 1059 aaPredicted RBP19.68■□□□□ 0.74
COL1A1-212ENST00000510710 AIDAQ96BJ3 306 aa19.68■□□□□ 0.74
COL1A1-212ENST00000510710 GJA3Q9Y6H8 435 aa19.68■□□□□ 0.74
COL1A1-212ENST00000510710 MAPK8IP3Q9UPT6 1336 aa19.68■□□□□ 0.74
COL1A1-212ENST00000510710 FOXN1O15353 648 aa19.67■□□□□ 0.74
COL1A1-212ENST00000510710 UBN2Q6ZU65 1347 aa19.67■□□□□ 0.74
COL1A1-212ENST00000510710 TCERG1O14776 1098 aaKnown RBP19.66■□□□□ 0.74
COL1A1-212ENST00000510710 LMOD1P29536 600 aaPredicted RBP19.66■□□□□ 0.74
COL1A1-212ENST00000510710 PPP1R42Q7Z4L9 355 aa19.66■□□□□ 0.74
COL1A1-212ENST00000510710 ZNF34Q8IZ26 560 aa19.66■□□□□ 0.74
COL1A1-212ENST00000510710 LARGE2Q8N3Y3 721 aa19.66■□□□□ 0.74
COL1A1-212ENST00000510710 CRAMP1Q96RY5 1269 aa19.66■□□□□ 0.74
COL1A1-212ENST00000510710 IBTKQ9P2D0 1353 aaPredicted RBP19.66■□□□□ 0.74
COL1A1-212ENST00000510710 PPEF1O14829 653 aaPredicted RBP19.65■□□□□ 0.74
COL1A1-212ENST00000510710 GIGYF2Q6Y7W6 1299 aaKnown RBP19.65■□□□□ 0.74
COL1A1-212ENST00000510710 TMX4Q9H1E5 349 aaPredicted RBP19.65■□□□□ 0.74
COL1A1-212ENST00000510710 SNED1Q8TER0 1413 aa19.65■□□□□ 0.74
COL1A1-212ENST00000510710 NTSR2O95665 410 aa19.64■□□□□ 0.73
COL1A1-212ENST00000510710 CTCFP49711 727 aaPredicted RBP19.64■□□□□ 0.73
COL1A1-212ENST00000510710 DEFB115Q30KQ5 88 aa19.64■□□□□ 0.73
COL1A1-212ENST00000510710 NLRP3Q96P20 1036 aa19.64■□□□□ 0.73
COL1A1-212ENST00000510710 TSPYL4Q9UJ04 414 aa19.64■□□□□ 0.73
COL1A1-212ENST00000510710 ERBB4Q15303 1308 aa19.64■□□□□ 0.73
COL1A1-212ENST00000510710 ADAMTSL1Q8N6G6 1762 aa19.64■□□□□ 0.73
COL1A1-212ENST00000510710 RIC1Q4ADV7 1423 aa19.63■□□□□ 0.73
COL1A1-212ENST00000510710 EIF2S2P20042 333 aaKnown RBP19.63■□□□□ 0.73
COL1A1-212ENST00000510710 DDX10Q13206 875 aaKnown RBP19.63■□□□□ 0.73
COL1A1-212ENST00000510710 PARP10Q53GL7 1025 aa19.63■□□□□ 0.73
COL1A1-212ENST00000510710 PRDM10Q9NQV6 1147 aa19.63■□□□□ 0.73
COL1A1-212ENST00000510710 RASSF10A6NK89 507 aa19.62■□□□□ 0.73
COL1A1-212ENST00000510710 NIM1KQ8IY84 436 aa19.62■□□□□ 0.73
COL1A1-212ENST00000510710 ABT1Q9ULW3 272 aaKnown RBP19.62■□□□□ 0.73
COL1A1-212ENST00000510710 EPS15P42566 896 aa19.61■□□□□ 0.73
COL1A1-212ENST00000510710 C3orf67Q6ZVT6 689 aa19.61■□□□□ 0.73
COL1A1-212ENST00000510710 UTP14AQ9BVJ6 771 aaKnown RBP19.61■□□□□ 0.73
COL1A1-212ENST00000510710 WBP1LQ9NX94 342 aa19.61■□□□□ 0.73
COL1A1-212ENST00000510710 COL4A5P29400 1685 aa19.61■□□□□ 0.73
COL1A1-212ENST00000510710 PPIP5K2O43314 1243 aa19.6■□□□□ 0.73
COL1A1-212ENST00000510710 SCNN1DP51172 638 aa19.6■□□□□ 0.73
COL1A1-212ENST00000510710 RIPK4P57078 832 aa19.6■□□□□ 0.73
COL1A1-212ENST00000510710 SLC51AQ86UW1 340 aa19.6■□□□□ 0.73
COL1A1-212ENST00000510710 DDX21Q9NR30 783 aaKnown RBP eCLIP19.6■□□□□ 0.73
COL1A1-212ENST00000510710 WDR33Q9C0J8 1336 aaKnown RBP19.59■□□□□ 0.73
COL1A1-212ENST00000510710 PDIA6Q15084 440 aa19.59■□□□□ 0.73
COL1A1-212ENST00000510710 SLC10A5Q5PT55 438 aa19.59■□□□□ 0.73
COL1A1-212ENST00000510710 ATP6V0A2Q9Y487 856 aa19.59■□□□□ 0.73
COL1A1-212ENST00000510710 ANXA1P04083 346 aa19.58■□□□□ 0.72
COL1A1-212ENST00000510710 LBX1P52954 281 aa19.58■□□□□ 0.72
COL1A1-212ENST00000510710 AOC3Q16853 763 aa19.58■□□□□ 0.72
COL1A1-212ENST00000510710 USP50Q70EL3 339 aaPredicted RBP19.58■□□□□ 0.72
COL1A1-212ENST00000510710 VPS33BQ9H267 617 aa19.58■□□□□ 0.72
COL1A1-212ENST00000510710 LTBP1Q14766 1721 aa19.57■□□□□ 0.72
COL1A1-212ENST00000510710 MAP2K1Q02750 393 aaPredicted RBP19.57■□□□□ 0.72
COL1A1-212ENST00000510710 PROSER3Q2NL68 480 aa19.57■□□□□ 0.72
COL1A1-212ENST00000510710 LRP10Q7Z4F1 713 aa19.57■□□□□ 0.72
COL1A1-212ENST00000510710 SUPT20HQ8NEM7 779 aa19.57■□□□□ 0.72
COL1A1-212ENST00000510710 BABAM1Q9NWV8 329 aa19.57■□□□□ 0.72
COL1A1-212ENST00000510710 AIMP1Q12904 312 aaKnown RBP19.56■□□□□ 0.72
COL1A1-212ENST00000510710 PAXIP1Q6ZW49 1069 aaPredicted RBP19.56■□□□□ 0.72
COL1A1-212ENST00000510710 NECTIN2Q92692 538 aa19.56■□□□□ 0.72
COL1A1-212ENST00000510710 ABCC4O15439 1325 aa19.55■□□□□ 0.72
COL1A1-212ENST00000510710 BBOX1O75936 387 aa19.55■□□□□ 0.72
COL1A1-212ENST00000510710 FMR1Q06787 632 aaKnown RBP eCLIP19.55■□□□□ 0.72
COL1A1-212ENST00000510710 LMOD3Q0VAK6 560 aa19.55■□□□□ 0.72
COL1A1-212ENST00000510710 HSP90AB3PQ58FF7 597 aa19.55■□□□□ 0.72
COL1A1-212ENST00000510710 COPS6Q7L5N1 327 aa19.55■□□□□ 0.72
COL1A1-212ENST00000510710 ZNRF3Q9ULT6 936 aa19.55■□□□□ 0.72
COL1A1-212ENST00000510710 TMPOP42166 694 aaKnown RBP19.54■□□□□ 0.72
COL1A1-212ENST00000510710 DPP8Q6V1X1 898 aaPredicted RBP19.54■□□□□ 0.72
COL1A1-212ENST00000510710 SP8Q8IXZ3 490 aa19.54■□□□□ 0.72
COL1A1-212ENST00000510710 GPRC5DQ9NZD1 345 aa19.54■□□□□ 0.72
COL1A1-212ENST00000510710 HCLS1P14317 486 aaPredicted RBP19.53■□□□□ 0.72
COL1A1-212ENST00000510710 ECE1P42892 770 aa19.53■□□□□ 0.72
COL1A1-212ENST00000510710 CXCL9Q07325 125 aa19.53■□□□□ 0.72
COL1A1-212ENST00000510710 GRM1Q13255 1194 aa19.53■□□□□ 0.72
COL1A1-212ENST00000510710 DDX46Q7L014 1031 aaKnown RBP19.53■□□□□ 0.72
COL1A1-212ENST00000510710 NLRP10Q86W26 655 aa19.53■□□□□ 0.72
COL1A1-212ENST00000510710 MPNDQ8N594 471 aa19.53■□□□□ 0.72
COL1A1-212ENST00000510710 XAGE3Q8WTP9 111 aa19.53■□□□□ 0.72
COL1A1-212ENST00000510710 RTFDC1Q9BY42 306 aaPredicted RBP19.53■□□□□ 0.72
COL1A1-212ENST00000510710 ADARB2Q9NS39 739 aaKnown RBP19.53■□□□□ 0.72
COL1A1-212ENST00000510710 TRAF5O00463 557 aa19.52■□□□□ 0.72
COL1A1-212ENST00000510710 HSPA8P11142 646 aaKnown RBP19.52■□□□□ 0.72
COL1A1-212ENST00000510710 TCIRG1Q13488 830 aa19.52■□□□□ 0.72
COL1A1-212ENST00000510710 RALBP1Q15311 655 aa19.52■□□□□ 0.72
COL1A1-212ENST00000510710 CST9Q5W186 159 aa19.52■□□□□ 0.72
COL1A1-212ENST00000510710 CAPNS2Q96L46 248 aa19.52■□□□□ 0.72
COL1A1-212ENST00000510710 TRMT112Q9UI30 125 aaKnown RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms