RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 CCDC144CPQ8IYA2 1237 aa12.19□□□□□ -0.46
NEK1-206ENST00000510533 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.19□□□□□ -0.46
NEK1-206ENST00000510533 POGZQ7Z3K3 1410 aa12.18□□□□□ -0.46
NEK1-206ENST00000510533 MACROD2A1Z1Q3 448 aa12.18□□□□□ -0.46
NEK1-206ENST00000510533 WASLO00401 505 aaPredicted RBP12.18□□□□□ -0.46
NEK1-206ENST00000510533 IDEP14735 1019 aa12.18□□□□□ -0.46
NEK1-206ENST00000510533 KIF5BP33176 963 aa12.18□□□□□ -0.46
NEK1-206ENST00000510533 LMAN1P49257 510 aa12.18□□□□□ -0.46
NEK1-206ENST00000510533 MICU3Q86XE3 530 aa12.18□□□□□ -0.46
NEK1-206ENST00000510533 EHBP1Q8NDI1 1231 aa12.18□□□□□ -0.46
NEK1-206ENST00000510533 ADGRF5Q8IZF2 1346 aa12.18□□□□□ -0.46
NEK1-206ENST00000510533 SCAF11Q99590 1463 aaKnown RBP12.18□□□□□ -0.46
NEK1-206ENST00000510533 ZPR1O75312 459 aa12.18□□□□□ -0.46
NEK1-206ENST00000510533 UBA7P41226 1012 aa12.18□□□□□ -0.46
NEK1-206ENST00000510533 HAND2P61296 217 aa12.18□□□□□ -0.46
NEK1-206ENST00000510533 ARHGAP45Q92619 1136 aa12.18□□□□□ -0.46
NEK1-206ENST00000510533 JADE2Q9NQC1 790 aa12.18□□□□□ -0.46
NEK1-206ENST00000510533 SDSP20132 328 aa12.17□□□□□ -0.46
NEK1-206ENST00000510533 SF3B2Q13435 895 aaKnown RBP12.17□□□□□ -0.46
NEK1-206ENST00000510533 SLC26A6Q9BXS9 759 aa12.17□□□□□ -0.46
NEK1-206ENST00000510533 PODXL2Q9NZ53 605 aa12.17□□□□□ -0.46
NEK1-206ENST00000510533 FAM135AQ9P2D6 1515 aa12.17□□□□□ -0.46
NEK1-206ENST00000510533 TCERG1LQ5VWI1 586 aa12.17□□□□□ -0.46
NEK1-206ENST00000510533 MAATS1Q7Z4T9 603 aa12.17□□□□□ -0.46
NEK1-206ENST00000510533 N4BP3O15049 544 aa12.17□□□□□ -0.46
NEK1-206ENST00000510533 CLCN1P35523 988 aa12.17□□□□□ -0.46
NEK1-206ENST00000510533 SYKP43405 635 aa12.17□□□□□ -0.46
NEK1-206ENST00000510533 UBE4AQ14139 1066 aa12.17□□□□□ -0.46
NEK1-206ENST00000510533 MFSD6Q6ZSS7 791 aa12.17□□□□□ -0.46
NEK1-206ENST00000510533 SLF2Q8IX21 1173 aa12.17□□□□□ -0.46
NEK1-206ENST00000510533 ZSWIM4Q9H7M6 989 aa12.17□□□□□ -0.46
NEK1-206ENST00000510533 PCF11O94913 1555 aaKnown RBP12.17□□□□□ -0.46
NEK1-206ENST00000510533 MAGI1Q96QZ7 1491 aaPredicted RBP12.17□□□□□ -0.46
NEK1-206ENST00000510533 NOP2P46087 812 aaKnown RBP12.17□□□□□ -0.46
NEK1-206ENST00000510533 SNRKQ9NRH2 765 aa12.17□□□□□ -0.46
NEK1-206ENST00000510533 HMGB2P26583 209 aaKnown RBP12.16□□□□□ -0.46
NEK1-206ENST00000510533 UBASH3AP57075 661 aa12.16□□□□□ -0.46
NEK1-206ENST00000510533 NOLC1Q14978 699 aaKnown RBP eCLIP12.16□□□□□ -0.46
NEK1-206ENST00000510533 RHPN1Q8TCX5 695 aa12.16□□□□□ -0.46
NEK1-206ENST00000510533 EHMT1Q9H9B1 1298 aa12.16□□□□□ -0.46
NEK1-206ENST00000510533 PI4KAP2A4QPH2 592 aa12.16□□□□□ -0.46
NEK1-206ENST00000510533 PI4KAP1Q8N8J0 262 aa12.16□□□□□ -0.46
NEK1-206ENST00000510533 FAM200AQ8TCP9 573 aa12.16□□□□□ -0.46
NEK1-206ENST00000510533 ZBTB3Q9H5J0 574 aa12.16□□□□□ -0.46
NEK1-206ENST00000510533 CNPY2Q9Y2B0 182 aa12.16□□□□□ -0.46
NEK1-206ENST00000510533 STAMBPO95630 424 aa12.16□□□□□ -0.46
NEK1-206ENST00000510533 PRPF4BQ13523 1007 aaKnown RBP12.16□□□□□ -0.46
NEK1-206ENST00000510533 ANO6Q4KMQ2 910 aa12.16□□□□□ -0.46
NEK1-206ENST00000510533 GIGYF2Q6Y7W6 1299 aaKnown RBP12.16□□□□□ -0.46
NEK1-206ENST00000510533 NECAB1Q8N987 351 aa12.16□□□□□ -0.46
NEK1-206ENST00000510533 BRF1Q92994 677 aa12.16□□□□□ -0.46
NEK1-206ENST00000510533 CWC25Q9NXE8 425 aaPredicted RBP12.16□□□□□ -0.46
NEK1-206ENST00000510533 CTNNA2P26232 953 aa12.16□□□□□ -0.46
NEK1-206ENST00000510533 RAB11FIP4Q86YS3 637 aa12.16□□□□□ -0.46
NEK1-206ENST00000510533 KRT222Q8N1A0 295 aa12.16□□□□□ -0.46
NEK1-206ENST00000510533 RMND1Q9NWS8 449 aa12.16□□□□□ -0.46
NEK1-206ENST00000510533 PHF8Q9UPP1 1060 aa12.16□□□□□ -0.46
NEK1-206ENST00000510533 PPFIA3O75145 1194 aa12.15□□□□□ -0.46
NEK1-206ENST00000510533 SKILP12757 684 aa12.15□□□□□ -0.46
NEK1-206ENST00000510533 SPECC1LQ69YQ0 1117 aa12.15□□□□□ -0.46
NEK1-206ENST00000510533 LDHAL6AQ6ZMR3 332 aa12.15□□□□□ -0.46
NEK1-206ENST00000510533 AEBP2Q6ZN18 517 aaPredicted RBP12.15□□□□□ -0.46
NEK1-206ENST00000510533 USP48Q86UV5 1035 aa12.15□□□□□ -0.46
NEK1-206ENST00000510533 ZNF830Q96NB3 372 aaPredicted RBP12.15□□□□□ -0.46
NEK1-206ENST00000510533 XRCC6P12956 609 aaKnown RBP eCLIP12.15□□□□□ -0.46
NEK1-206ENST00000510533 TRIM47Q96LD4 638 aa12.15□□□□□ -0.46
NEK1-206ENST00000510533 SCLT1Q96NL6 688 aa12.15□□□□□ -0.46
NEK1-206ENST00000510533 LRRC27Q9C0I9 530 aa12.15□□□□□ -0.46
NEK1-206ENST00000510533 KAT14Q9H8E8 782 aa12.15□□□□□ -0.46
NEK1-206ENST00000510533 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.15□□□□□ -0.462e-6■■□□□ 11.7
NEK1-206ENST00000510533 NESP48681 1621 aa12.15□□□□□ -0.46
NEK1-206ENST00000510533 FAM83GA6ND36 823 aa12.15□□□□□ -0.46
NEK1-206ENST00000510533 CKAP4Q07065 602 aaKnown RBP12.15□□□□□ -0.46
NEK1-206ENST00000510533 PDE4BQ07343 736 aa12.15□□□□□ -0.46
NEK1-206ENST00000510533 SPTY2D1Q68D10 685 aaPredicted RBP12.15□□□□□ -0.46
NEK1-206ENST00000510533 UBE3BQ7Z3V4 1068 aa12.15□□□□□ -0.46
NEK1-206ENST00000510533 RPRD2Q5VT52 1461 aaKnown RBP12.15□□□□□ -0.46
NEK1-206ENST00000510533 LIG1P18858 919 aa12.15□□□□□ -0.46
NEK1-206ENST00000510533 STXBP4Q6ZWJ1 553 aa12.15□□□□□ -0.46
NEK1-206ENST00000510533 TICAM2Q86XR7 235 aa12.15□□□□□ -0.46
NEK1-206ENST00000510533 CEP112Q8N8E3 955 aa12.15□□□□□ -0.46
NEK1-206ENST00000510533 KCNG4Q8TDN1 519 aa12.15□□□□□ -0.46
NEK1-206ENST00000510533 ZHX1Q9UKY1 873 aaPredicted RBP12.15□□□□□ -0.46
NEK1-206ENST00000510533 KIAA0586Q9BVV6 1533 aa12.15□□□□□ -0.46
NEK1-206ENST00000510533 DISP3Q9P2K9 1392 aa12.15□□□□□ -0.47
NEK1-206ENST00000510533 TSPY2A6NKD2 308 aa12.15□□□□□ -0.47
NEK1-206ENST00000510533 AKR1B10O60218 316 aa12.15□□□□□ -0.47
NEK1-206ENST00000510533 CCDC186Q7Z3E2 898 aa12.15□□□□□ -0.47
NEK1-206ENST00000510533 SNX21Q969T3 373 aa12.15□□□□□ -0.47
NEK1-206ENST00000510533 CTAGE1Q96RT6 745 aa12.15□□□□□ -0.47
NEK1-206ENST00000510533 KLF18A0A0U1RQI7 1052 aa12.14□□□□□ -0.47
NEK1-206ENST00000510533 MYO1BO43795 1136 aa12.14□□□□□ -0.47
NEK1-206ENST00000510533 GPTP24298 496 aa12.14□□□□□ -0.47
NEK1-206ENST00000510533 NF2P35240 595 aa12.14□□□□□ -0.47
NEK1-206ENST00000510533 HSF2BPO75031 334 aa12.14□□□□□ -0.47
NEK1-206ENST00000510533 RBM25P49756 843 aaKnown RBP12.14□□□□□ -0.47
NEK1-206ENST00000510533 IFI16Q16666 785 aaKnown RBP12.14□□□□□ -0.47
NEK1-206ENST00000510533 ESYT1Q9BSJ8 1104 aa12.14□□□□□ -0.47
NEK1-206ENST00000510533 PCDHB15Q9Y5E8 787 aa12.14□□□□□ -0.47
NEK1-206ENST00000510533 ANKRD36BQ8N2N9 1353 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms