RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 PPEF1O14829 653 aaPredicted RBP13.21□□□□□ -0.29
SCARB2-204ENST00000509994 IARSP41252 1262 aaKnown RBP13.21□□□□□ -0.29
SCARB2-204ENST00000509994 EAPPQ56P03 285 aaPredicted RBP13.21□□□□□ -0.29
SCARB2-204ENST00000509994 XAGE3Q8WTP9 111 aa13.21□□□□□ -0.29
SCARB2-204ENST00000509994 C7orf43Q8WVR3 580 aa13.21□□□□□ -0.29
SCARB2-204ENST00000509994 ADAMTS8Q9UP79 889 aa13.21□□□□□ -0.29
SCARB2-204ENST00000509994 LAMB2P55268 1798 aa13.2□□□□□ -0.3
SCARB2-204ENST00000509994 ZNF541Q9H0D2 1346 aa13.2□□□□□ -0.3
SCARB2-204ENST00000509994 NTSR2O95665 410 aa13.2□□□□□ -0.3
SCARB2-204ENST00000509994 KRT24Q2M2I5 525 aa13.2□□□□□ -0.3
SCARB2-204ENST00000509994 HSP90AB3PQ58FF7 597 aa13.2□□□□□ -0.3
SCARB2-204ENST00000509994 HDGFL1Q5TGJ6 251 aa13.2□□□□□ -0.3
SCARB2-204ENST00000509994 CHADLQ6NUI6 762 aa13.2□□□□□ -0.3
SCARB2-204ENST00000509994 COPS6Q7L5N1 327 aa13.2□□□□□ -0.3
SCARB2-204ENST00000509994 ZNF34Q8IZ26 560 aa13.2□□□□□ -0.3
SCARB2-204ENST00000509994 DNAJC5GQ8N7S2 189 aa13.2□□□□□ -0.3
SCARB2-204ENST00000509994 ZNF428Q96B54 188 aa13.2□□□□□ -0.3
SCARB2-204ENST00000509994 NLRP3Q96P20 1036 aa13.2□□□□□ -0.3
SCARB2-204ENST00000509994 CLEC11AQ9Y240 323 aa13.2□□□□□ -0.3
SCARB2-204ENST00000509994 POTECB2RU33 542 aa13.19□□□□□ -0.3
SCARB2-204ENST00000509994 PDIA6Q15084 440 aa13.19□□□□□ -0.3
SCARB2-204ENST00000509994 CRY2Q49AN0 593 aa13.19□□□□□ -0.3
SCARB2-204ENST00000509994 CHPF2Q9P2E5 772 aa13.19□□□□□ -0.3
SCARB2-204ENST00000509994 GJA3Q9Y6H8 435 aa13.19□□□□□ -0.3
SCARB2-204ENST00000509994 RIC1Q4ADV7 1423 aa13.19□□□□□ -0.3
SCARB2-204ENST00000509994 EIF6P56537 245 aaKnown RBP13.18□□□□□ -0.3
SCARB2-204ENST00000509994 CC2D2BQ6DHV5 1058 aa13.18□□□□□ -0.3
SCARB2-204ENST00000509994 LARGE2Q8N3Y3 721 aa13.18□□□□□ -0.3
SCARB2-204ENST00000509994 PRKRIP1Q9H875 184 aaPredicted RBP13.18□□□□□ -0.3
SCARB2-204ENST00000509994 DDX21Q9NR30 783 aaKnown RBP eCLIP13.18□□□□□ -0.3
SCARB2-204ENST00000509994 TRMT112Q9UI30 125 aaKnown RBP13.18□□□□□ -0.3
SCARB2-204ENST00000509994 HACL1Q9UJ83 578 aa13.18□□□□□ -0.3
SCARB2-204ENST00000509994 TRIM35Q9UPQ4 493 aa13.18□□□□□ -0.3
SCARB2-204ENST00000509994 RNF123Q5XPI4 1314 aa13.17□□□□□ -0.3
SCARB2-204ENST00000509994 CHL1O00533 1208 aa13.17□□□□□ -0.3
SCARB2-204ENST00000509994 POTEIP0CG38 1075 aa13.17□□□□□ -0.3
SCARB2-204ENST00000509994 POTEJP0CG39 1038 aa13.17□□□□□ -0.3
SCARB2-204ENST00000509994 LMOD1P29536 600 aaPredicted RBP13.17□□□□□ -0.3
SCARB2-204ENST00000509994 IFFO2Q5TF58 517 aa13.17□□□□□ -0.3
SCARB2-204ENST00000509994 C3orf67Q6ZVT6 689 aa13.17□□□□□ -0.3
SCARB2-204ENST00000509994 CRAMP1Q96RY5 1269 aa13.17□□□□□ -0.3
SCARB2-204ENST00000509994 PSMD1Q99460 953 aa13.17□□□□□ -0.3
SCARB2-204ENST00000509994 TAF1P21675 1872 aa13.16□□□□□ -0.3
SCARB2-204ENST00000509994 PPIP5K2O43314 1243 aa13.16□□□□□ -0.3
SCARB2-204ENST00000509994 HCLS1P14317 486 aaPredicted RBP13.16□□□□□ -0.3
SCARB2-204ENST00000509994 HOXA10P31260 410 aaPredicted RBP13.16□□□□□ -0.3
SCARB2-204ENST00000509994 CALD1Q05682 793 aaKnown RBP13.16□□□□□ -0.3
SCARB2-204ENST00000509994 GRIPAP1Q4V328 841 aa13.16□□□□□ -0.3
SCARB2-204ENST00000509994 LDHDQ86WU2 507 aa13.16□□□□□ -0.3
SCARB2-204ENST00000509994 NIM1KQ8IY84 436 aa13.16□□□□□ -0.3
SCARB2-204ENST00000509994 L3MBTL3Q96JM7 780 aaPredicted RBP13.16□□□□□ -0.3
SCARB2-204ENST00000509994 TAF1DQ9H5J8 278 aaPredicted RBP13.16□□□□□ -0.3
SCARB2-204ENST00000509994 DBF4Q9UBU7 674 aaPredicted RBP13.16□□□□□ -0.3
SCARB2-204ENST00000509994 ABCC4O15439 1325 aa13.15□□□□□ -0.3
SCARB2-204ENST00000509994 SH3TC1Q8TE82 1336 aa13.15□□□□□ -0.3
SCARB2-204ENST00000509994 APAF1O14727 1248 aa13.15□□□□□ -0.3
SCARB2-204ENST00000509994 EPHX2P34913 555 aa13.15□□□□□ -0.3
SCARB2-204ENST00000509994 TCIRG1Q13488 830 aa13.15□□□□□ -0.3
SCARB2-204ENST00000509994 DUSP27Q5VZP5 1158 aa13.15□□□□□ -0.3
SCARB2-204ENST00000509994 DDX46Q7L014 1031 aaKnown RBP13.15□□□□□ -0.3
SCARB2-204ENST00000509994 LRP10Q7Z4F1 713 aa13.15□□□□□ -0.3
SCARB2-204ENST00000509994 NLRP10Q86W26 655 aa13.15□□□□□ -0.3
SCARB2-204ENST00000509994 GPC2Q8N158 579 aa13.15□□□□□ -0.3
SCARB2-204ENST00000509994 CFAP44Q96MT7 982 aa13.15□□□□□ -0.3
SCARB2-204ENST00000509994 RTL5Q5HYW3 569 aaPredicted RBP13.14□□□□□ -0.31
SCARB2-204ENST00000509994 DPP8Q6V1X1 898 aaPredicted RBP13.14□□□□□ -0.31
SCARB2-204ENST00000509994 ANKRD13DQ6ZTN6 518 aa13.14□□□□□ -0.31
SCARB2-204ENST00000509994 SLC51AQ86UW1 340 aa13.14□□□□□ -0.31
SCARB2-204ENST00000509994 MBIPQ9NS73 344 aa13.14□□□□□ -0.31
SCARB2-204ENST00000509994 HYPKQ9NX55 129 aa13.14□□□□□ -0.31
SCARB2-204ENST00000509994 MKRN1Q9UHC7 482 aaKnown RBP13.14□□□□□ -0.31
SCARB2-204ENST00000509994 DDX60Q8IY21 1712 aaKnown RBP13.13□□□□□ -0.31
SCARB2-204ENST00000509994 ATP5J2-PTCD1G3V325 749 aa13.13□□□□□ -0.31
SCARB2-204ENST00000509994 FZD9O00144 591 aa13.13□□□□□ -0.31
SCARB2-204ENST00000509994 ELL2O00472 640 aaPredicted RBP13.13□□□□□ -0.31
SCARB2-204ENST00000509994 HOXB7P09629 217 aa13.13□□□□□ -0.31
SCARB2-204ENST00000509994 GNAI1P63096 354 aa13.13□□□□□ -0.31
SCARB2-204ENST00000509994 GOLGA2Q08379 1002 aa13.13□□□□□ -0.31
SCARB2-204ENST00000509994 AOC3Q16853 763 aa13.13□□□□□ -0.31
SCARB2-204ENST00000509994 PNMA8AQ86V59 439 aaPredicted RBP13.13□□□□□ -0.31
SCARB2-204ENST00000509994 SUPT20HQ8NEM7 779 aa13.13□□□□□ -0.31
SCARB2-204ENST00000509994 PLBD2Q8NHP8 589 aa13.13□□□□□ -0.31
SCARB2-204ENST00000509994 CREBZFQ9NS37 354 aa13.13□□□□□ -0.31
SCARB2-204ENST00000509994 ATP6V0A2Q9Y487 856 aa13.13□□□□□ -0.31
SCARB2-204ENST00000509994 PCNTO95613 3336 aa13.13□□□□□ -0.31
SCARB2-204ENST00000509994 COL4A5P29400 1685 aa13.12□□□□□ -0.31
SCARB2-204ENST00000509994 RIC3Q7Z5B4 369 aa13.12□□□□□ -0.31
SCARB2-204ENST00000509994 JMYQ8N9B5 988 aa13.12□□□□□ -0.31
SCARB2-204ENST00000509994 BBOX1O75936 387 aa13.11□□□□□ -0.31
SCARB2-204ENST00000509994 GRAPQ13588 217 aa13.11□□□□□ -0.31
SCARB2-204ENST00000509994 SLC10A5Q5PT55 438 aa13.11□□□□□ -0.31
SCARB2-204ENST00000509994 MAP1SQ66K74 1059 aaPredicted RBP13.11□□□□□ -0.31
SCARB2-204ENST00000509994 MPNDQ8N594 471 aa13.11□□□□□ -0.31
SCARB2-204ENST00000509994 GRAPLQ8TC17 118 aaPredicted RBP13.11□□□□□ -0.31
SCARB2-204ENST00000509994 FAM89AQ96GI7 184 aa13.11□□□□□ -0.31
SCARB2-204ENST00000509994 IFT57Q9NWB7 429 aa13.11□□□□□ -0.31
SCARB2-204ENST00000509994 SNED1Q8TER0 1413 aa13.11□□□□□ -0.31
SCARB2-204ENST00000509994 HSPA1AP0DMV8 641 aaKnown RBP13.1□□□□□ -0.31
SCARB2-204ENST00000509994 HSPA1BP0DMV9 641 aaKnown RBP13.1□□□□□ -0.31
SCARB2-204ENST00000509994 TMEM88BA6NKF7 163 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms