RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 TNS4Q8IZW8 715 aa14.32□□□□□ -0.12
RNF4-212ENST00000509258 NYXQ9GZU5 481 aa14.32□□□□□ -0.12
RNF4-212ENST00000509258 ZNF277Q9NRM2 450 aaPredicted RBP14.32□□□□□ -0.12
RNF4-212ENST00000509258 SCN4AP35499 1836 aa14.31□□□□□ -0.12
RNF4-212ENST00000509258 ERVV-1B6SEH8 477 aa14.31□□□□□ -0.12
RNF4-212ENST00000509258 CHL1O00533 1208 aa14.31□□□□□ -0.12
RNF4-212ENST00000509258 WDR43Q15061 677 aaKnown RBP eCLIP14.31□□□□□ -0.12
RNF4-212ENST00000509258 TAF1DQ9H5J8 278 aaPredicted RBP14.31□□□□□ -0.12
RNF4-212ENST00000509258 IBTKQ9P2D0 1353 aaPredicted RBP14.31□□□□□ -0.12
RNF4-212ENST00000509258 SNED1Q8TER0 1413 aa14.31□□□□□ -0.12
RNF4-212ENST00000509258 DDX60Q8IY21 1712 aaKnown RBP14.3□□□□□ -0.12
RNF4-212ENST00000509258 CRY2Q49AN0 593 aa14.3□□□□□ -0.12
RNF4-212ENST00000509258 SUSD4Q5VX71 490 aa14.3□□□□□ -0.12
RNF4-212ENST00000509258 KIF6Q6ZMV9 814 aa14.3□□□□□ -0.12
RNF4-212ENST00000509258 C3orf67Q6ZVT6 689 aa14.3□□□□□ -0.12
RNF4-212ENST00000509258 ZNF541Q9H0D2 1346 aa14.3□□□□□ -0.12
RNF4-212ENST00000509258 RIC1Q4ADV7 1423 aa14.3□□□□□ -0.12
RNF4-212ENST00000509258 IARSP41252 1262 aaKnown RBP14.29□□□□□ -0.12
RNF4-212ENST00000509258 ZNF34Q8IZ26 560 aa14.29□□□□□ -0.12
RNF4-212ENST00000509258 BABAM1Q9NWV8 329 aa14.29□□□□□ -0.12
RNF4-212ENST00000509258 MKRN1Q9UHC7 482 aaKnown RBP14.29□□□□□ -0.12
RNF4-212ENST00000509258 HACL1Q9UJ83 578 aa14.29□□□□□ -0.12
RNF4-212ENST00000509258 LAS1LQ9Y4W2 734 aaKnown RBP14.29□□□□□ -0.12
RNF4-212ENST00000509258 ERBB4Q15303 1308 aa14.29□□□□□ -0.12
RNF4-212ENST00000509258 PASKQ96RG2 1323 aa14.29□□□□□ -0.12
RNF4-212ENST00000509258 COL4A5P29400 1685 aa14.29□□□□□ -0.12
RNF4-212ENST00000509258 APAF1O14727 1248 aa14.28□□□□□ -0.12
RNF4-212ENST00000509258 NTSR2O95665 410 aa14.28□□□□□ -0.12
RNF4-212ENST00000509258 COL4A1P02462 1669 aa14.28□□□□□ -0.12
RNF4-212ENST00000509258 LMOD3Q0VAK6 560 aa14.28□□□□□ -0.12
RNF4-212ENST00000509258 CC2D2BQ6DHV5 1058 aa14.28□□□□□ -0.12
RNF4-212ENST00000509258 ZNF428Q96B54 188 aa14.28□□□□□ -0.12
RNF4-212ENST00000509258 PSMD1Q99460 953 aa14.28□□□□□ -0.12
RNF4-212ENST00000509258 CNTNAP1P78357 1384 aa14.27□□□□□ -0.12
RNF4-212ENST00000509258 FZD9O00144 591 aa14.27□□□□□ -0.13
RNF4-212ENST00000509258 EPHX2P34913 555 aa14.27□□□□□ -0.13
RNF4-212ENST00000509258 EAPPQ56P03 285 aaPredicted RBP14.27□□□□□ -0.13
RNF4-212ENST00000509258 GIGYF2Q6Y7W6 1299 aaKnown RBP14.27□□□□□ -0.13
RNF4-212ENST00000509258 PNMA8AQ86V59 439 aaPredicted RBP14.27□□□□□ -0.13
RNF4-212ENST00000509258 GPC2Q8N158 579 aa14.27□□□□□ -0.13
RNF4-212ENST00000509258 JDP2Q8WYK2 163 aa14.27□□□□□ -0.13
RNF4-212ENST00000509258 RPGRQ92834 1020 aaKnown RBP14.27□□□□□ -0.13
RNF4-212ENST00000509258 RNF123Q5XPI4 1314 aa14.26□□□□□ -0.13
RNF4-212ENST00000509258 ZNF853P0CG23 659 aa14.26□□□□□ -0.13
RNF4-212ENST00000509258 GRIPAP1Q4V328 841 aa14.26□□□□□ -0.13
RNF4-212ENST00000509258 SYNE4Q8N205 404 aa14.26□□□□□ -0.13
RNF4-212ENST00000509258 XAGE3Q8WTP9 111 aa14.26□□□□□ -0.13
RNF4-212ENST00000509258 MBIPQ9NS73 344 aa14.26□□□□□ -0.13
RNF4-212ENST00000509258 CHPF2Q9P2E5 772 aa14.26□□□□□ -0.13
RNF4-212ENST00000509258 ADAMTSL1Q8N6G6 1762 aa14.26□□□□□ -0.13
RNF4-212ENST00000509258 TMEM88BA6NKF7 163 aa14.25□□□□□ -0.13
RNF4-212ENST00000509258 CAPN15O75808 1086 aa14.25□□□□□ -0.13
RNF4-212ENST00000509258 HOXA10P31260 410 aaPredicted RBP14.25□□□□□ -0.13
RNF4-212ENST00000509258 AIMP1Q12904 312 aaKnown RBP14.25□□□□□ -0.13
RNF4-212ENST00000509258 COPS6Q7L5N1 327 aa14.25□□□□□ -0.13
RNF4-212ENST00000509258 CLEC11AQ9Y240 323 aa14.25□□□□□ -0.13
RNF4-212ENST00000509258 ITGBL1O95965 494 aaPredicted RBP14.24□□□□□ -0.13
RNF4-212ENST00000509258 CFAP44Q96MT7 982 aa14.24□□□□□ -0.13
RNF4-212ENST00000509258 DDX21Q9NR30 783 aaKnown RBP eCLIP14.24□□□□□ -0.13
RNF4-212ENST00000509258 EIF6P56537 245 aaKnown RBP14.23□□□□□ -0.13
RNF4-212ENST00000509258 PARP10Q53GL7 1025 aa14.23□□□□□ -0.13
RNF4-212ENST00000509258 PPP1R42Q7Z4L9 355 aa14.23□□□□□ -0.13
RNF4-212ENST00000509258 RBM17Q96I25 401 aaKnown RBP14.23□□□□□ -0.13
RNF4-212ENST00000509258 PPEF1O14829 653 aaPredicted RBP14.22□□□□□ -0.13
RNF4-212ENST00000509258 LMOD1P29536 600 aaPredicted RBP14.22□□□□□ -0.13
RNF4-212ENST00000509258 DUSP27Q5VZP5 1158 aa14.22□□□□□ -0.13
RNF4-212ENST00000509258 LARGE2Q8N3Y3 721 aa14.22□□□□□ -0.13
RNF4-212ENST00000509258 CRAMP1Q96RY5 1269 aa14.22□□□□□ -0.13
RNF4-212ENST00000509258 TMX4Q9H1E5 349 aaPredicted RBP14.22□□□□□ -0.13
RNF4-212ENST00000509258 LTBP1Q14766 1721 aa14.21□□□□□ -0.13
RNF4-212ENST00000509258 HDGFL1Q5TGJ6 251 aa14.21□□□□□ -0.13
RNF4-212ENST00000509258 MAP1SQ66K74 1059 aaPredicted RBP14.21□□□□□ -0.13
RNF4-212ENST00000509258 NLRP10Q86W26 655 aa14.21□□□□□ -0.13
RNF4-212ENST00000509258 CNTROBQ8N137 903 aa14.21□□□□□ -0.13
RNF4-212ENST00000509258 C8orf58Q8NAV2 365 aa14.21□□□□□ -0.13
RNF4-212ENST00000509258 AIDAQ96BJ3 306 aa14.21□□□□□ -0.13
RNF4-212ENST00000509258 GJA3Q9Y6H8 435 aa14.21□□□□□ -0.13
RNF4-212ENST00000509258 ZNF316A6NFI3 1004 aaPredicted RBP14.2□□□□□ -0.14
RNF4-212ENST00000509258 ELL2O00472 640 aaPredicted RBP14.2□□□□□ -0.14
RNF4-212ENST00000509258 VEGFBP49765 207 aa14.2□□□□□ -0.14
RNF4-212ENST00000509258 NLRP3Q96P20 1036 aa14.2□□□□□ -0.14
RNF4-212ENST00000509258 LRRC37AA6NMS7 1700 aa14.2□□□□□ -0.14
RNF4-212ENST00000509258 DUOX1Q9NRD9 1551 aa14.19□□□□□ -0.14
RNF4-212ENST00000509258 RASSF10A6NK89 507 aa14.19□□□□□ -0.14
RNF4-212ENST00000509258 TCERG1O14776 1098 aaKnown RBP14.19□□□□□ -0.14
RNF4-212ENST00000509258 FOXN1O15353 648 aa14.19□□□□□ -0.14
RNF4-212ENST00000509258 HCLS1P14317 486 aaPredicted RBP14.19□□□□□ -0.14
RNF4-212ENST00000509258 ZEB1P37275 1124 aaPredicted RBP14.19□□□□□ -0.14
RNF4-212ENST00000509258 SCNN1DP51172 638 aa14.19□□□□□ -0.14
RNF4-212ENST00000509258 TCIRG1Q13488 830 aa14.19□□□□□ -0.14
RNF4-212ENST00000509258 SLC10A5Q5PT55 438 aa14.19□□□□□ -0.14
RNF4-212ENST00000509258 NIM1KQ8IY84 436 aa14.19□□□□□ -0.14
RNF4-212ENST00000509258 TSPYL6Q8N831 410 aa14.19□□□□□ -0.14
RNF4-212ENST00000509258 UTP14AQ9BVJ6 771 aaKnown RBP14.19□□□□□ -0.14
RNF4-212ENST00000509258 PRDM10Q9NQV6 1147 aa14.19□□□□□ -0.14
RNF4-212ENST00000509258 IFT57Q9NWB7 429 aa14.19□□□□□ -0.14
RNF4-212ENST00000509258 ATP5J2-PTCD1G3V325 749 aa14.18□□□□□ -0.14
RNF4-212ENST00000509258 PPIP5K2O43314 1243 aa14.18□□□□□ -0.14
RNF4-212ENST00000509258 HOXB7P09629 217 aa14.18□□□□□ -0.14
RNF4-212ENST00000509258 CTCFP49711 727 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms