RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 N4BP2Q86UW6 1770 aaPredicted RBP9.49□□□□□ -0.89
TOPBP1-207ENST00000509162 DLEC1Q9Y238 1755 aa9.49□□□□□ -0.89
TOPBP1-207ENST00000509162 ZNF521Q96K83 1311 aa9.49□□□□□ -0.89
TOPBP1-207ENST00000509162 CANXP27824 592 aaKnown RBP9.48□□□□□ -0.89
TOPBP1-207ENST00000509162 PDIA6Q15084 440 aa9.48□□□□□ -0.89
TOPBP1-207ENST00000509162 SLC16A10Q8TF71 515 aa9.48□□□□□ -0.89
TOPBP1-207ENST00000509162 ARXQ96QS3 562 aa9.48□□□□□ -0.89
TOPBP1-207ENST00000509162 MBIPQ9NS73 344 aa9.48□□□□□ -0.89
TOPBP1-207ENST00000509162 TSPYL4Q9UJ04 414 aa9.48□□□□□ -0.89
TOPBP1-207ENST00000509162 RTCBQ9Y3I0 505 aaKnown RBP9.48□□□□□ -0.89
TOPBP1-207ENST00000509162 ANKRD36CQ5JPF3 1778 aa9.47□□□□□ -0.89
TOPBP1-207ENST00000509162 TULP1O00294 542 aaPredicted RBP9.47□□□□□ -0.89
TOPBP1-207ENST00000509162 CAMTA2O94983 1202 aa9.47□□□□□ -0.89
TOPBP1-207ENST00000509162 ANXA1P04083 346 aa9.47□□□□□ -0.89
TOPBP1-207ENST00000509162 HOXB3P14651 431 aaPredicted RBP9.47□□□□□ -0.89
TOPBP1-207ENST00000509162 USPL1Q5W0Q7 1092 aa9.47□□□□□ -0.89
TOPBP1-207ENST00000509162 COL4A1P02462 1669 aa9.47□□□□□ -0.89
TOPBP1-207ENST00000509162 ARFGEF2Q9Y6D5 1785 aa9.47□□□□□ -0.89
TOPBP1-207ENST00000509162 POLRMTO00411 1230 aaKnown RBP9.46□□□□□ -0.9
TOPBP1-207ENST00000509162 MMP10P09238 476 aa9.46□□□□□ -0.9
TOPBP1-207ENST00000509162 SNRPA1P09661 255 aaKnown RBP9.46□□□□□ -0.9
TOPBP1-207ENST00000509162 LMOD3Q0VAK6 560 aa9.46□□□□□ -0.9
TOPBP1-207ENST00000509162 DOK7Q18PE1 504 aa9.46□□□□□ -0.9
TOPBP1-207ENST00000509162 TMEM92Q6UXU6 159 aa9.46□□□□□ -0.9
TOPBP1-207ENST00000509162 TTLL7Q6ZT98 887 aa9.46□□□□□ -0.9
TOPBP1-207ENST00000509162 WWC1Q8IX03 1113 aa9.46□□□□□ -0.9
TOPBP1-207ENST00000509162 TSR2Q969E8 191 aaKnown RBP9.46□□□□□ -0.9
TOPBP1-207ENST00000509162 SYT17Q9BSW7 474 aa9.46□□□□□ -0.9
TOPBP1-207ENST00000509162 NUP98P52948 1817 aa9.45□□□□□ -0.9
TOPBP1-207ENST00000509162 TM4SF1P30408 202 aa9.45□□□□□ -0.9
TOPBP1-207ENST00000509162 IL6STP40189 918 aaPredicted RBP9.45□□□□□ -0.9
TOPBP1-207ENST00000509162 NFIXQ14938 502 aa9.45□□□□□ -0.9
TOPBP1-207ENST00000509162 CCDC27Q2M243 656 aa9.45□□□□□ -0.9
TOPBP1-207ENST00000509162 TRAPPC3LQ5T215 181 aa9.45□□□□□ -0.9
TOPBP1-207ENST00000509162 SPNS2Q8IVW8 549 aa9.45□□□□□ -0.9
TOPBP1-207ENST00000509162 FAM9BQ8IZU0 186 aa9.45□□□□□ -0.9
TOPBP1-207ENST00000509162 TSPYL6Q8N831 410 aa9.45□□□□□ -0.9
TOPBP1-207ENST00000509162 FLAD1Q8NFF5 587 aa9.45□□□□□ -0.9
TOPBP1-207ENST00000509162 PNNQ9H307 717 aaKnown RBP9.45□□□□□ -0.9
TOPBP1-207ENST00000509162 NARFQ9UHQ1 456 aa9.45□□□□□ -0.9
TOPBP1-207ENST00000509162 FANCIQ9NVI1 1328 aa9.45□□□□□ -0.9
TOPBP1-207ENST00000509162 ABCC12Q96J65 1359 aa9.45□□□□□ -0.9
TOPBP1-207ENST00000509162 TBC1D9BQ66K14 1250 aa9.44□□□□□ -0.9
TOPBP1-207ENST00000509162 C8orf58Q8NAV2 365 aa9.44□□□□□ -0.9
TOPBP1-207ENST00000509162 MARVELD3Q96A59 401 aa9.44□□□□□ -0.9
TOPBP1-207ENST00000509162 IFT57Q9NWB7 429 aa9.44□□□□□ -0.9
TOPBP1-207ENST00000509162 BABAM1Q9NWV8 329 aa9.44□□□□□ -0.9
TOPBP1-207ENST00000509162 TBC1D2BQ9UPU7 963 aa9.44□□□□□ -0.9
TOPBP1-207ENST00000509162 ATP10DQ9P241 1426 aa9.44□□□□□ -0.9
TOPBP1-207ENST00000509162 UBN2Q6ZU65 1347 aa9.43□□□□□ -0.9
TOPBP1-207ENST00000509162 CCER2I3L3R5 266 aa9.43□□□□□ -0.9
TOPBP1-207ENST00000509162 STARD3NLO95772 234 aa9.43□□□□□ -0.9
TOPBP1-207ENST00000509162 NEFMP07197 916 aa9.43□□□□□ -0.9
TOPBP1-207ENST00000509162 RFC4P35249 363 aa9.43□□□□□ -0.9
TOPBP1-207ENST00000509162 EMP3P54852 163 aa9.43□□□□□ -0.9
TOPBP1-207ENST00000509162 HLFQ16534 295 aa9.43□□□□□ -0.9
TOPBP1-207ENST00000509162 DIEXFQ68CQ4 756 aaKnown RBP9.43□□□□□ -0.9
TOPBP1-207ENST00000509162 ERICH6Q7L0X2 663 aa9.43□□□□□ -0.9
TOPBP1-207ENST00000509162 SLC51AQ86UW1 340 aa9.43□□□□□ -0.9
TOPBP1-207ENST00000509162 NECTIN2Q92692 538 aa9.43□□□□□ -0.9
TOPBP1-207ENST00000509162 WDR70Q9NW82 654 aa9.43□□□□□ -0.9
TOPBP1-207ENST00000509162 SALL2Q9Y467 1007 aaPredicted RBP9.43□□□□□ -0.9
TOPBP1-207ENST00000509162 YBX3P16989 372 aaKnown RBP eCLIP9.42□□□□□ -0.9
TOPBP1-207ENST00000509162 ZNF710Q8N1W2 664 aa9.42□□□□□ -0.9
TOPBP1-207ENST00000509162 ZNF330Q9Y3S2 320 aaPredicted RBP9.42□□□□□ -0.9
TOPBP1-207ENST00000509162 LAS1LQ9Y4W2 734 aaKnown RBP9.42□□□□□ -0.9
TOPBP1-207ENST00000509162 LAMB2P55268 1798 aa9.42□□□□□ -0.9
TOPBP1-207ENST00000509162 DDX60Q8IY21 1712 aaKnown RBP9.42□□□□□ -0.9
TOPBP1-207ENST00000509162 RIMBP2O15034 1052 aa9.41□□□□□ -0.9
TOPBP1-207ENST00000509162 POLD1P28340 1107 aa9.41□□□□□ -0.9
TOPBP1-207ENST00000509162 DUSP27Q5VZP5 1158 aa9.41□□□□□ -0.9
TOPBP1-207ENST00000509162 DZIP3Q86Y13 1208 aaKnown RBP9.41□□□□□ -0.9
TOPBP1-207ENST00000509162 CCDC24Q8N4L8 307 aa9.41□□□□□ -0.9
TOPBP1-207ENST00000509162 TEX13AQ9BXU3 409 aaPredicted RBP9.41□□□□□ -0.9
TOPBP1-207ENST00000509162 ZSWIM6Q9HCJ5 1215 aa9.41□□□□□ -0.9
TOPBP1-207ENST00000509162 CHPF2Q9P2E5 772 aa9.41□□□□□ -0.9
TOPBP1-207ENST00000509162 PPP1R1BQ9UD71 204 aaPredicted RBP9.41□□□□□ -0.9
TOPBP1-207ENST00000509162 WWC3Q9ULE0 1092 aa9.41□□□□□ -0.9
TOPBP1-207ENST00000509162 ARFGEF1Q9Y6D6 1849 aa9.4□□□□□ -0.9
TOPBP1-207ENST00000509162 IL16Q14005 1332 aa9.4□□□□□ -0.9
TOPBP1-207ENST00000509162 ERBB4Q15303 1308 aa9.4□□□□□ -0.9
TOPBP1-207ENST00000509162 MYL6BP14649 208 aa9.4□□□□□ -0.9
TOPBP1-207ENST00000509162 HOXB1P14653 301 aaPredicted RBP9.4□□□□□ -0.9
TOPBP1-207ENST00000509162 KCNA3P22001 575 aa9.4□□□□□ -0.9
TOPBP1-207ENST00000509162 SNED1Q8TER0 1413 aa9.39□□□□□ -0.91
TOPBP1-207ENST00000509162 MAP3K15Q6ZN16 1313 aa9.39□□□□□ -0.91
TOPBP1-207ENST00000509162 CACNA1SQ13698 1873 aa9.39□□□□□ -0.91
TOPBP1-207ENST00000509162 ELL2O00472 640 aaPredicted RBP9.39□□□□□ -0.91
TOPBP1-207ENST00000509162 EIF2S2P20042 333 aaKnown RBP9.39□□□□□ -0.91
TOPBP1-207ENST00000509162 GNAI1P63096 354 aa9.39□□□□□ -0.91
TOPBP1-207ENST00000509162 PRR5LQ6MZQ0 368 aa9.39□□□□□ -0.91
TOPBP1-207ENST00000509162 BICDL1Q6ZP65 573 aa9.39□□□□□ -0.91
TOPBP1-207ENST00000509162 NLGN1Q8N2Q7 840 aa9.39□□□□□ -0.91
TOPBP1-207ENST00000509162 ZBTB3Q9H5J0 574 aa9.39□□□□□ -0.91
TOPBP1-207ENST00000509162 ADCY9O60503 1353 aa9.38□□□□□ -0.91
TOPBP1-207ENST00000509162 TCERG1O14776 1098 aaKnown RBP9.38□□□□□ -0.91
TOPBP1-207ENST00000509162 PPP1R37O75864 691 aa9.38□□□□□ -0.91
TOPBP1-207ENST00000509162 HOXB7P09629 217 aa9.38□□□□□ -0.91
TOPBP1-207ENST00000509162 DPEP1P16444 411 aa9.38□□□□□ -0.91
TOPBP1-207ENST00000509162 CHRNA5P30532 468 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms