RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 MYCBPQ99417 103 aaPredicted RBP4.69□□□□□ -1.66
NEDD4-209ENST00000508871 KIAA1522Q9P206 1035 aaPredicted RBP4.69□□□□□ -1.66
NEDD4-209ENST00000508871 HTATSF1O43719 755 aaKnown RBP4.69□□□□□ -1.66
NEDD4-209ENST00000508871 AMHR2Q16671 573 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 CCDC157Q569K6 752 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 CCDC70Q6NSX1 233 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 ANKRD42Q8N9B4 389 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 DCAF11Q8TEB1 546 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 MKRN1Q9UHC7 482 aaKnown RBP4.69□□□□□ -1.66
NEDD4-209ENST00000508871 TSKSQ9UJT2 592 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 MED14O60244 1454 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 GOLGA6CA6NDK9 693 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 GOLGA6BA6NDN3 693 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 CAND2O75155 1236 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 GOLGA6DP0CG33 693 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 COPB2P35606 906 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 PPP1R18Q6NYC8 613 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 AMOTL1Q8IY63 956 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 RBSNQ9H1K0 784 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 GOLGA6AQ9NYA3 693 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 PUF60Q9UHX1 559 aaKnown RBP4.69□□□□□ -1.66
NEDD4-209ENST00000508871 CTDP1Q9Y5B0 961 aaPredicted RBP4.69□□□□□ -1.66
NEDD4-209ENST00000508871 ARHGAP23Q9P227 1491 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 RHBDL3P58872 404 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 TOMM20Q15388 145 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 CLUL1Q15846 466 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 C1orf228Q6PIY5 440 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 RBM46Q8TBY0 533 aaKnown RBP4.69□□□□□ -1.66
NEDD4-209ENST00000508871 C8orf37Q96NL8 207 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.69□□□□□ -1.66
NEDD4-209ENST00000508871 AFG3L2Q9Y4W6 797 aa4.69□□□□□ -1.66
NEDD4-209ENST00000508871 NRKQ7Z2Y5 1582 aa4.68□□□□□ -1.66
NEDD4-209ENST00000508871 ERICH4A6NGS2 130 aa4.68□□□□□ -1.66
NEDD4-209ENST00000508871 PLS1Q14651 629 aa4.68□□□□□ -1.66
NEDD4-209ENST00000508871 ZKSCAN2Q63HK3 967 aa4.68□□□□□ -1.66
NEDD4-209ENST00000508871 SULF1Q8IWU6 871 aa4.68□□□□□ -1.66
NEDD4-209ENST00000508871 PNISRQ8TF01 805 aaKnown RBP4.68□□□□□ -1.66
NEDD4-209ENST00000508871 SMC4Q9NTJ3 1288 aa4.68□□□□□ -1.66
NEDD4-209ENST00000508871 MYSM1Q5VVJ2 828 aa4.68□□□□□ -1.66
NEDD4-209ENST00000508871 SGSM3Q96HU1 749 aa4.68□□□□□ -1.66
NEDD4-209ENST00000508871 NLRP2Q9NX02 1062 aa4.68□□□□□ -1.66
NEDD4-209ENST00000508871 BRD4O60885 1362 aaPredicted RBP4.68□□□□□ -1.66
NEDD4-209ENST00000508871 FAM161AQ3B820 660 aa4.68□□□□□ -1.66
NEDD4-209ENST00000508871 SHQ1Q6PI26 577 aaKnown RBP4.68□□□□□ -1.66
NEDD4-209ENST00000508871 CPXCR1Q8N123 301 aa4.68□□□□□ -1.66
NEDD4-209ENST00000508871 FLCNQ8NFG4 579 aa4.68□□□□□ -1.66
NEDD4-209ENST00000508871 TECPR2O15040 1411 aa4.68□□□□□ -1.66
NEDD4-209ENST00000508871 PTPRMP28827 1452 aa4.68□□□□□ -1.66
NEDD4-209ENST00000508871 FIBPO43427 364 aa4.68□□□□□ -1.66
NEDD4-209ENST00000508871 PPFIA3O75145 1194 aa4.68□□□□□ -1.66
NEDD4-209ENST00000508871 TMF1P82094 1093 aa4.68□□□□□ -1.66
NEDD4-209ENST00000508871 PMM1Q92871 262 aa4.68□□□□□ -1.66
NEDD4-209ENST00000508871 SWAP70Q9UH65 585 aa4.68□□□□□ -1.66
NEDD4-209ENST00000508871 NSD2O96028 1365 aa4.68□□□□□ -1.66
NEDD4-209ENST00000508871 CEP170BQ9Y4F5 1589 aaPredicted RBP4.67□□□□□ -1.66
NEDD4-209ENST00000508871 CCDC194A0A1B0GVG4 234 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 TPM2P07951 284 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 PLCB4Q15147 1175 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 ISM2Q6H9L7 571 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 GET4Q7L5D6 327 aaPredicted RBP4.67□□□□□ -1.66
NEDD4-209ENST00000508871 TULP4Q9NRJ4 1543 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 NWD1Q149M9 1564 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 FAM135BQ49AJ0 1406 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 ZPR1O75312 459 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 OATP04181 439 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 SOX11P35716 441 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 NUBP1P53384 320 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 C8orf34Q49A92 452 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 SPATA17Q96L03 361 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 MTA3Q9BTC8 594 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 MFRPQ9BY79 579 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 C14orf93Q9H972 538 aaKnown RBP4.67□□□□□ -1.66
NEDD4-209ENST00000508871 SUGT1Q9Y2Z0 365 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 PCDHGB7Q9Y5F8 929 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 PARD3Q8TEW0 1356 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 TMEM164Q5U3C3 297 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 USP48Q86UV5 1035 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 LRGUKQ96M69 825 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 GPR101Q96P66 508 aaPredicted RBP4.67□□□□□ -1.66
NEDD4-209ENST00000508871 MCM8Q9UJA3 840 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 FAM50BQ9Y247 325 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 FAN1Q9Y2M0 1017 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 SLC26A4O43511 780 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 MTMR3Q13615 1198 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 NAA30Q147X3 362 aaPredicted RBP4.67□□□□□ -1.66
NEDD4-209ENST00000508871 RCAN3Q9UKA8 241 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 ATP1A2P50993 1020 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 ITKQ08881 620 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 SLC9A5Q14940 896 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 CFAP58Q5T655 872 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 TEX19Q8NA77 164 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 C1orf131Q8NDD1 294 aaKnown RBP4.67□□□□□ -1.66
NEDD4-209ENST00000508871 ACBD3Q9H3P7 528 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 NOL7Q9UMY1 257 aaKnown RBP4.67□□□□□ -1.66
NEDD4-209ENST00000508871 SHPRHQ149N8 1683 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 NALCNQ8IZF0 1738 aa4.67□□□□□ -1.66
NEDD4-209ENST00000508871 TNNI2P48788 182 aa4.66□□□□□ -1.66
NEDD4-209ENST00000508871 SART3Q15020 963 aaKnown RBP4.66□□□□□ -1.66
NEDD4-209ENST00000508871 STK32AQ8WU08 396 aa4.66□□□□□ -1.66
NEDD4-209ENST00000508871 KCNB2Q92953 911 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms