RNA–Protein interactions for RNA: ENST00000508735.5

SNHG4-206, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 310 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-206ENST00000508735 CHADLQ6NUI6 762 aa16.03■□□□□ 0.16
SNHG4-206ENST00000508735 C3orf67Q6ZVT6 689 aa16.03■□□□□ 0.16
SNHG4-206ENST00000508735 SLC51AQ86UW1 340 aa16.03■□□□□ 0.16
SNHG4-206ENST00000508735 NECTIN2Q92692 538 aa16.03■□□□□ 0.16
SNHG4-206ENST00000508735 RPGRQ92834 1020 aaKnown RBP16.03■□□□□ 0.16
SNHG4-206ENST00000508735 PCNTO95613 3336 aa16.03■□□□□ 0.16
SNHG4-206ENST00000508735 PSMD1Q99460 953 aa16.02■□□□□ 0.16
SNHG4-206ENST00000508735 TAF1DQ9H5J8 278 aaPredicted RBP16.02■□□□□ 0.16
SNHG4-206ENST00000508735 SCN4AP35499 1836 aa16.01■□□□□ 0.15
SNHG4-206ENST00000508735 IQCA1LA6NCM1 817 aa16.01■□□□□ 0.15
SNHG4-206ENST00000508735 FZD9O00144 591 aa16.01■□□□□ 0.15
SNHG4-206ENST00000508735 KRT24Q2M2I5 525 aa16.01■□□□□ 0.15
SNHG4-206ENST00000508735 PPP1R42Q7Z4L9 355 aa16.01■□□□□ 0.15
SNHG4-206ENST00000508735 TRIM35Q9UPQ4 493 aa16.01■□□□□ 0.15
SNHG4-206ENST00000508735 COL4A5P29400 1685 aa16.01■□□□□ 0.15
SNHG4-206ENST00000508735 CHL1O00533 1208 aa16■□□□□ 0.15
SNHG4-206ENST00000508735 PARP10Q53GL7 1025 aa16■□□□□ 0.15
SNHG4-206ENST00000508735 CC2D2BQ6DHV5 1058 aa16■□□□□ 0.15
SNHG4-206ENST00000508735 COPS6Q7L5N1 327 aa16■□□□□ 0.15
SNHG4-206ENST00000508735 RUNDC1Q96C34 613 aa16■□□□□ 0.15
SNHG4-206ENST00000508735 RBM17Q96I25 401 aaKnown RBP16■□□□□ 0.15
SNHG4-206ENST00000508735 CRAMP1Q96RY5 1269 aa16■□□□□ 0.15
SNHG4-206ENST00000508735 TCERG1O14776 1098 aaKnown RBP15.99■□□□□ 0.15
SNHG4-206ENST00000508735 PPEF1O14829 653 aaPredicted RBP15.99■□□□□ 0.15
SNHG4-206ENST00000508735 AIMP1Q12904 312 aaKnown RBP15.99■□□□□ 0.15
SNHG4-206ENST00000508735 LDHDQ86WU2 507 aa15.99■□□□□ 0.15
SNHG4-206ENST00000508735 XAGE3Q8WTP9 111 aa15.99■□□□□ 0.15
SNHG4-206ENST00000508735 UTP14AQ9BVJ6 771 aaKnown RBP15.99■□□□□ 0.15
SNHG4-206ENST00000508735 HACL1Q9UJ83 578 aa15.99■□□□□ 0.15
SNHG4-206ENST00000508735 ADAMTS8Q9UP79 889 aa15.99■□□□□ 0.15
SNHG4-206ENST00000508735 ANKRD36CQ5JPF3 1778 aa15.98■□□□□ 0.15
SNHG4-206ENST00000508735 WDR43Q15061 677 aaKnown RBP eCLIP15.98■□□□□ 0.15
SNHG4-206ENST00000508735 EAPPQ56P03 285 aaPredicted RBP15.98■□□□□ 0.15
SNHG4-206ENST00000508735 SLC10A5Q5PT55 438 aa15.98■□□□□ 0.15
SNHG4-206ENST00000508735 NLRP3Q96P20 1036 aa15.98■□□□□ 0.15
SNHG4-206ENST00000508735 LAS1LQ9Y4W2 734 aaKnown RBP15.98■□□□□ 0.15
SNHG4-206ENST00000508735 RNF123Q5XPI4 1314 aa15.97■□□□□ 0.15
SNHG4-206ENST00000508735 EPHX2P34913 555 aa15.97■□□□□ 0.15
SNHG4-206ENST00000508735 COL13A1Q5TAT6 717 aaPredicted RBP15.97■□□□□ 0.15
SNHG4-206ENST00000508735 NLRP10Q86W26 655 aa15.97■□□□□ 0.15
SNHG4-206ENST00000508735 JDP2Q8WYK2 163 aa15.97■□□□□ 0.15
SNHG4-206ENST00000508735 DDX21Q9NR30 783 aaKnown RBP eCLIP15.97■□□□□ 0.15
SNHG4-206ENST00000508735 CREBZFQ9NS37 354 aa15.97■□□□□ 0.15
SNHG4-206ENST00000508735 ADAMTSL1Q8N6G6 1762 aa15.97■□□□□ 0.15
SNHG4-206ENST00000508735 PASKQ96RG2 1323 aa15.96■□□□□ 0.15
SNHG4-206ENST00000508735 GRIPAP1Q4V328 841 aa15.96■□□□□ 0.15
SNHG4-206ENST00000508735 GPC2Q8N158 579 aa15.96■□□□□ 0.15
SNHG4-206ENST00000508735 LAMB2P55268 1798 aa15.95■□□□□ 0.14
SNHG4-206ENST00000508735 ITGBL1O95965 494 aaPredicted RBP15.95■□□□□ 0.14
SNHG4-206ENST00000508735 TCIRG1Q13488 830 aa15.95■□□□□ 0.14
SNHG4-206ENST00000508735 HSP90AB3PQ58FF7 597 aa15.95■□□□□ 0.14
SNHG4-206ENST00000508735 CHPF2Q9P2E5 772 aa15.95■□□□□ 0.14
SNHG4-206ENST00000508735 MKRN1Q9UHC7 482 aaKnown RBP15.95■□□□□ 0.14
SNHG4-206ENST00000508735 CLEC11AQ9Y240 323 aa15.95■□□□□ 0.14
SNHG4-206ENST00000508735 ABCC4O15439 1325 aa15.94■□□□□ 0.14
SNHG4-206ENST00000508735 LTBP1Q14766 1721 aa15.94■□□□□ 0.14
SNHG4-206ENST00000508735 HSPA1AP0DMV8 641 aaKnown RBP15.94■□□□□ 0.14
SNHG4-206ENST00000508735 HSPA1BP0DMV9 641 aaKnown RBP15.94■□□□□ 0.14
SNHG4-206ENST00000508735 HCLS1P14317 486 aaPredicted RBP15.94■□□□□ 0.14
SNHG4-206ENST00000508735 EIF6P56537 245 aaKnown RBP15.94■□□□□ 0.14
SNHG4-206ENST00000508735 LARGE2Q8N3Y3 721 aa15.94■□□□□ 0.14
SNHG4-206ENST00000508735 ZNF428Q96B54 188 aa15.94■□□□□ 0.14
SNHG4-206ENST00000508735 PRKRIP1Q9H875 184 aaPredicted RBP15.94■□□□□ 0.14
SNHG4-206ENST00000508735 ATP6V0A2Q9Y487 856 aa15.94■□□□□ 0.14
SNHG4-206ENST00000508735 GJA3Q9Y6H8 435 aa15.94■□□□□ 0.14
SNHG4-206ENST00000508735 HDGFL1Q5TGJ6 251 aa15.93■□□□□ 0.14
SNHG4-206ENST00000508735 TRMT112Q9UI30 125 aaKnown RBP15.93■□□□□ 0.14
SNHG4-206ENST00000508735 AOC3Q16853 763 aa15.92■□□□□ 0.14
SNHG4-206ENST00000508735 MAP1SQ66K74 1059 aaPredicted RBP15.92■□□□□ 0.14
SNHG4-206ENST00000508735 PNMA8AQ86V59 439 aaPredicted RBP15.92■□□□□ 0.14
SNHG4-206ENST00000508735 CFAP44Q96MT7 982 aa15.92■□□□□ 0.14
SNHG4-206ENST00000508735 CNTNAP1P78357 1384 aa15.91■□□□□ 0.14
SNHG4-206ENST00000508735 PPIP5K2O43314 1243 aa15.91■□□□□ 0.14
SNHG4-206ENST00000508735 HOXB7P09629 217 aa15.91■□□□□ 0.14
SNHG4-206ENST00000508735 SCNN1DP51172 638 aa15.91■□□□□ 0.14
SNHG4-206ENST00000508735 DUSP27Q5VZP5 1158 aa15.91■□□□□ 0.14
SNHG4-206ENST00000508735 NIM1KQ8IY84 436 aa15.91■□□□□ 0.14
SNHG4-206ENST00000508735 PLBD2Q8NHP8 589 aa15.91■□□□□ 0.14
SNHG4-206ENST00000508735 MBIPQ9NS73 344 aa15.91■□□□□ 0.14
SNHG4-206ENST00000508735 SH3TC1Q8TE82 1336 aa15.91■□□□□ 0.14
SNHG4-206ENST00000508735 TMEM88BA6NKF7 163 aa15.9■□□□□ 0.14
SNHG4-206ENST00000508735 BBOX1O75936 387 aa15.9■□□□□ 0.14
SNHG4-206ENST00000508735 EPS15P42566 896 aa15.9■□□□□ 0.14
SNHG4-206ENST00000508735 ANKRD13DQ6ZTN6 518 aa15.9■□□□□ 0.14
SNHG4-206ENST00000508735 SP8Q8IXZ3 490 aa15.9■□□□□ 0.14
SNHG4-206ENST00000508735 CNTROBQ8N137 903 aa15.9■□□□□ 0.14
SNHG4-206ENST00000508735 RTFDC1Q9BY42 306 aaPredicted RBP15.9■□□□□ 0.14
SNHG4-206ENST00000508735 TMX4Q9H1E5 349 aaPredicted RBP15.9■□□□□ 0.14
SNHG4-206ENST00000508735 DBF4Q9UBU7 674 aaPredicted RBP15.9■□□□□ 0.14
SNHG4-206ENST00000508735 TAF1P21675 1872 aa15.89■□□□□ 0.13
SNHG4-206ENST00000508735 DDX60Q8IY21 1712 aaKnown RBP15.89■□□□□ 0.13
SNHG4-206ENST00000508735 ATP5J2-PTCD1G3V325 749 aa15.89■□□□□ 0.13
SNHG4-206ENST00000508735 APAF1O14727 1248 aa15.89■□□□□ 0.13
SNHG4-206ENST00000508735 ZNF853P0CG23 659 aa15.89■□□□□ 0.13
SNHG4-206ENST00000508735 LMOD1P29536 600 aaPredicted RBP15.89■□□□□ 0.13
SNHG4-206ENST00000508735 DDX46Q7L014 1031 aaKnown RBP15.89■□□□□ 0.13
SNHG4-206ENST00000508735 ISCA1Q9BUE6 129 aa15.89■□□□□ 0.13
SNHG4-206ENST00000508735 VPS33BQ9H267 617 aa15.89■□□□□ 0.13
SNHG4-206ENST00000508735 GRAPQ13588 217 aa15.88■□□□□ 0.13
SNHG4-206ENST00000508735 DPP8Q6V1X1 898 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms