RNA–Protein interactions for RNA: ENST00000507638.1

VEGFC-201, Transcript of vascular endothelial growth factor C, humanhuman

TSL 3

Gene VEGFC, Length 759 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-201ENST00000507638 ATP7BP35670 1465 aa8.33□□□□□ -1.08
VEGFC-201ENST00000507638 IQGAP3Q86VI3 1631 aa8.33□□□□□ -1.08
VEGFC-201ENST00000507638 MYOM3Q5VTT5 1437 aa8.33□□□□□ -1.08
VEGFC-201ENST00000507638 GPKOWQ92917 476 aaPredicted RBP eCLIP8.33□□□□□ -1.08
VEGFC-201ENST00000507638 PHRF1Q9P1Y6 1649 aaKnown RBP8.32□□□□□ -1.08
VEGFC-201ENST00000507638 FMN2Q9NZ56 1722 aa8.32□□□□□ -1.08
VEGFC-201ENST00000507638 RTL5Q5HYW3 569 aaPredicted RBP8.32□□□□□ -1.08
VEGFC-201ENST00000507638 PLA2G2CQ5R387 149 aa8.32□□□□□ -1.08
VEGFC-201ENST00000507638 TSC1Q92574 1164 aa8.32□□□□□ -1.08
VEGFC-201ENST00000507638 TFCP2L1Q9NZI6 479 aa8.32□□□□□ -1.08
VEGFC-201ENST00000507638 STK26Q9P289 416 aa8.32□□□□□ -1.08
VEGFC-201ENST00000507638 IGSF1Q8N6C5 1336 aa8.31□□□□□ -1.08
VEGFC-201ENST00000507638 NRG2O14511 850 aaPredicted RBP8.31□□□□□ -1.08
VEGFC-201ENST00000507638 MSL1Q68DK7 614 aa8.31□□□□□ -1.08
VEGFC-201ENST00000507638 PROCA1Q8NCQ7 364 aaPredicted RBP8.31□□□□□ -1.08
VEGFC-201ENST00000507638 BANK1Q8NDB2 785 aa8.31□□□□□ -1.08
VEGFC-201ENST00000507638 NRXN1Q9ULB1 1477 aa8.31□□□□□ -1.08
VEGFC-201ENST00000507638 ZC3H4Q9UPT8 1303 aaKnown RBP8.3□□□□□ -1.08
VEGFC-201ENST00000507638 PAPPAQ13219 1627 aa8.3□□□□□ -1.08
VEGFC-201ENST00000507638 WNT7AO00755 349 aa8.3□□□□□ -1.08
VEGFC-201ENST00000507638 F12P00748 615 aaPredicted RBP8.3□□□□□ -1.08
VEGFC-201ENST00000507638 CTHP32929 405 aa8.3□□□□□ -1.08
VEGFC-201ENST00000507638 RFC5P40937 340 aa8.3□□□□□ -1.08
VEGFC-201ENST00000507638 PPARGC1BQ86YN6 1023 aaKnown RBP8.3□□□□□ -1.08
VEGFC-201ENST00000507638 HIRIP3Q9BW71 556 aaPredicted RBP8.3□□□□□ -1.08
VEGFC-201ENST00000507638 UNC93B1Q9H1C4 597 aa8.3□□□□□ -1.08
VEGFC-201ENST00000507638 PDZRN3Q9UPQ7 1066 aa8.3□□□□□ -1.08
VEGFC-201ENST00000507638 E9PCH4 1651 aa8.3□□□□□ -1.08
VEGFC-201ENST00000507638 HSPA8P11142 646 aaKnown RBP8.29□□□□□ -1.08
VEGFC-201ENST00000507638 ARHGAP27Q6ZUM4 889 aa8.29□□□□□ -1.08
VEGFC-201ENST00000507638 EMID1Q96A84 441 aaPredicted RBP8.29□□□□□ -1.08
VEGFC-201ENST00000507638 ACSBG1Q96GR2 724 aa8.29□□□□□ -1.08
VEGFC-201ENST00000507638 QSER1Q2KHR3 1735 aa8.29□□□□□ -1.08
VEGFC-201ENST00000507638 KDM2BQ8NHM5 1336 aa8.29□□□□□ -1.08
VEGFC-201ENST00000507638 ALS2Q96Q42 1657 aa8.28□□□□□ -1.08
VEGFC-201ENST00000507638 ANKRD30AQ9BXX3 1397 aa8.28□□□□□ -1.08
VEGFC-201ENST00000507638 PLEKHH1Q9ULM0 1364 aa8.28□□□□□ -1.08
VEGFC-201ENST00000507638 CRYBG1Q9Y4K1 1723 aa8.28□□□□□ -1.08
VEGFC-201ENST00000507638 BCL9O00512 1426 aa8.28□□□□□ -1.08
VEGFC-201ENST00000507638 TRPM3Q9HCF6 1732 aaPredicted RBP8.27□□□□□ -1.09
VEGFC-201ENST00000507638 AP1G2O75843 785 aa8.27□□□□□ -1.09
VEGFC-201ENST00000507638 KCPQ6ZWJ8 1503 aa8.27□□□□□ -1.09
VEGFC-201ENST00000507638 GPRASP1Q5JY77 1395 aa8.26□□□□□ -1.09
VEGFC-201ENST00000507638 AKAP12Q02952 1782 aa8.26□□□□□ -1.09
VEGFC-201ENST00000507638 GDF9O60383 454 aa8.26□□□□□ -1.09
VEGFC-201ENST00000507638 GFRA3O60609 400 aa8.26□□□□□ -1.09
VEGFC-201ENST00000507638 VARSP26640 1264 aaKnown RBP8.26□□□□□ -1.09
VEGFC-201ENST00000507638 KCNQ4P56696 695 aa8.26□□□□□ -1.09
VEGFC-201ENST00000507638 TMEM132AQ24JP5 1023 aa8.26□□□□□ -1.09
VEGFC-201ENST00000507638 C9orf131Q5VYM1 1079 aa8.26□□□□□ -1.09
VEGFC-201ENST00000507638 NUTM2GQ5VZR2 741 aa8.26□□□□□ -1.09
VEGFC-201ENST00000507638 COL23A1Q86Y22 540 aaPredicted RBP8.26□□□□□ -1.09
VEGFC-201ENST00000507638 TUBGCP6Q96RT7 1819 aa8.26□□□□□ -1.09
VEGFC-201ENST00000507638 USP17L8P0C7I0 530 aa8.25□□□□□ -1.09
VEGFC-201ENST00000507638 CTDSPL2Q05D32 466 aa8.25□□□□□ -1.09
VEGFC-201ENST00000507638 BPHLQ86WA6 291 aaPredicted RBP8.25□□□□□ -1.09
VEGFC-201ENST00000507638 MPNDQ8N594 471 aa8.25□□□□□ -1.09
VEGFC-201ENST00000507638 ZNF511Q8NB15 262 aa8.25□□□□□ -1.09
VEGFC-201ENST00000507638 PRM3Q9NNZ6 103 aa8.25□□□□□ -1.09
VEGFC-201ENST00000507638 GPSM3Q9Y4H4 160 aa8.25□□□□□ -1.09
VEGFC-201ENST00000507638 LRRC37A3O60309 1634 aa8.25□□□□□ -1.09
VEGFC-201ENST00000507638 C10orf71Q711Q0 1435 aa8.24□□□□□ -1.09
VEGFC-201ENST00000507638 EXOC5O00471 708 aa8.24□□□□□ -1.09
VEGFC-201ENST00000507638 PER1O15534 1290 aaPredicted RBP8.24□□□□□ -1.09
VEGFC-201ENST00000507638 VEGFBP49765 207 aa8.24□□□□□ -1.09
VEGFC-201ENST00000507638 PTCRAQ6ISU1 281 aaPredicted RBP8.24□□□□□ -1.09
VEGFC-201ENST00000507638 CYP4X1Q8N118 509 aa8.24□□□□□ -1.09
VEGFC-201ENST00000507638 ZNF592Q92610 1267 aa8.24□□□□□ -1.09
VEGFC-201ENST00000507638 ACIN1Q9UKV3 1341 aaKnown RBP8.24□□□□□ -1.09
VEGFC-201ENST00000507638 CLTCL1P53675 1640 aa8.23□□□□□ -1.09
VEGFC-201ENST00000507638 DGAT1O75907 488 aa8.23□□□□□ -1.09
VEGFC-201ENST00000507638 HABP4Q5JVS0 413 aaKnown RBP8.23□□□□□ -1.09
VEGFC-201ENST00000507638 RC3H1Q5TC82 1133 aaKnown RBP8.23□□□□□ -1.09
VEGFC-201ENST00000507638 EHBP1Q8NDI1 1231 aa8.23□□□□□ -1.09
VEGFC-201ENST00000507638 SNIP1Q8TAD8 396 aaKnown RBP8.23□□□□□ -1.09
VEGFC-201ENST00000507638 GCC1Q96CN9 775 aa8.23□□□□□ -1.09
VEGFC-201ENST00000507638 PKD2L1Q9P0L9 805 aa8.23□□□□□ -1.09
VEGFC-201ENST00000507638 MAP10Q9P2G4 905 aa8.23□□□□□ -1.09
VEGFC-201ENST00000507638 BCS1LQ9Y276 419 aa8.23□□□□□ -1.09
VEGFC-201ENST00000507638 PXDNLA1KZ92 1463 aa8.23□□□□□ -1.09
VEGFC-201ENST00000507638 PITPNM2Q9BZ72 1349 aa8.23□□□□□ -1.09
VEGFC-201ENST00000507638 BRD4O60885 1362 aaPredicted RBP8.22□□□□□ -1.09
VEGFC-201ENST00000507638 CNTNAP1P78357 1384 aa8.22□□□□□ -1.09
VEGFC-201ENST00000507638 DAPK1P53355 1430 aa8.22□□□□□ -1.09
VEGFC-201ENST00000507638 CRB1P82279 1406 aa8.22□□□□□ -1.09
VEGFC-201ENST00000507638 SLC27A3Q5K4L6 730 aa8.22□□□□□ -1.09
VEGFC-201ENST00000507638 PDXDC2PQ6P474 469 aa8.22□□□□□ -1.09
VEGFC-201ENST00000507638 TRIM67Q6ZTA4 783 aa8.22□□□□□ -1.09
VEGFC-201ENST00000507638 TOM1L2Q6ZVM7 507 aa8.22□□□□□ -1.09
VEGFC-201ENST00000507638 SLC17A8Q8NDX2 589 aa8.22□□□□□ -1.09
VEGFC-201ENST00000507638 BAP1Q92560 729 aa8.22□□□□□ -1.09
VEGFC-201ENST00000507638 MCOLN1Q9GZU1 580 aa8.22□□□□□ -1.09
VEGFC-201ENST00000507638 ANKRD30BQ9BXX2 1392 aa8.22□□□□□ -1.09
VEGFC-201ENST00000507638 CICQ96RK0 1608 aaPredicted RBP8.21□□□□□ -1.09
VEGFC-201ENST00000507638 IFT172Q9UG01 1749 aa8.21□□□□□ -1.09
VEGFC-201ENST00000507638 VEGFAP15692 232 aaPredicted RBP8.21□□□□□ -1.1
VEGFC-201ENST00000507638 SH3BP2P78314 561 aa8.21□□□□□ -1.1
VEGFC-201ENST00000507638 FOXC1Q12948 553 aa8.21□□□□□ -1.1
VEGFC-201ENST00000507638 TMEM132EQ6IEE7 984 aa8.21□□□□□ -1.1
VEGFC-201ENST00000507638 FAM174AQ8TBP5 190 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms