RNA–Protein interactions for RNA: ENST00000507017.5

SFXN1-206, Transcript of sideroflexin 1, humanhuman

TSL 5

Gene SFXN1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-206ENST00000507017 CHPF2Q9P2E5 772 aa9.86□□□□□ -0.83
SFXN1-206ENST00000507017 TOMM70O94826 608 aa9.85□□□□□ -0.83
SFXN1-206ENST00000507017 NTSR2O95665 410 aa9.85□□□□□ -0.83
SFXN1-206ENST00000507017 NEXNQ0ZGT2 675 aa9.85□□□□□ -0.83
SFXN1-206ENST00000507017 ERFEQ4G0M1 354 aa9.85□□□□□ -0.83
SFXN1-206ENST00000507017 RIC3Q7Z5B4 369 aa9.85□□□□□ -0.83
SFXN1-206ENST00000507017 WWC1Q8IX03 1113 aa9.85□□□□□ -0.83
SFXN1-206ENST00000507017 SUPT20HQ8NEM7 779 aa9.85□□□□□ -0.83
SFXN1-206ENST00000507017 NECTIN2Q92692 538 aa9.85□□□□□ -0.83
SFXN1-206ENST00000507017 CRAMP1Q96RY5 1269 aa9.85□□□□□ -0.83
SFXN1-206ENST00000507017 MYH16Q9H6N6 1097 aa9.85□□□□□ -0.83
SFXN1-206ENST00000507017 TRMT112Q9UI30 125 aaKnown RBP9.85□□□□□ -0.83
SFXN1-206ENST00000507017 HOXA10P31260 410 aaPredicted RBP9.84□□□□□ -0.83
SFXN1-206ENST00000507017 FKBP4Q02790 459 aaKnown RBP eCLIP9.84□□□□□ -0.83
SFXN1-206ENST00000507017 SLC10A5Q5PT55 438 aa9.84□□□□□ -0.83
SFXN1-206ENST00000507017 SUSD4Q5VX71 490 aa9.84□□□□□ -0.83
SFXN1-206ENST00000507017 DDX46Q7L014 1031 aaKnown RBP9.84□□□□□ -0.83
SFXN1-206ENST00000507017 LRP10Q7Z4F1 713 aa9.84□□□□□ -0.83
SFXN1-206ENST00000507017 CCDC24Q8N4L8 307 aa9.84□□□□□ -0.83
SFXN1-206ENST00000507017 VPS33BQ9H267 617 aa9.84□□□□□ -0.83
SFXN1-206ENST00000507017 TIAM2Q8IVF5 1701 aa9.84□□□□□ -0.83
SFXN1-206ENST00000507017 UBN2Q6ZU65 1347 aa9.83□□□□□ -0.84
SFXN1-206ENST00000507017 SBF1O95248 1867 aa9.83□□□□□ -0.84
SFXN1-206ENST00000507017 FER1L6Q2WGJ9 1857 aa9.83□□□□□ -0.84
SFXN1-206ENST00000507017 SENP3-EIF4A1A0A087X0R7 540 aa9.83□□□□□ -0.84
SFXN1-206ENST00000507017 IQCA1LA6NCM1 817 aa9.83□□□□□ -0.84
SFXN1-206ENST00000507017 GLTPD2A6NH11 291 aa9.83□□□□□ -0.84
SFXN1-206ENST00000507017 NFKBIEO00221 500 aa9.83□□□□□ -0.84
SFXN1-206ENST00000507017 VEGFAP15692 232 aaPredicted RBP9.83□□□□□ -0.84
SFXN1-206ENST00000507017 RASSF7Q02833 373 aa9.83□□□□□ -0.84
SFXN1-206ENST00000507017 FSTL1Q12841 308 aa9.83□□□□□ -0.84
SFXN1-206ENST00000507017 TRIM28Q13263 835 aaKnown RBP9.83□□□□□ -0.84
SFXN1-206ENST00000507017 PROSER3Q2NL68 480 aa9.83□□□□□ -0.84
SFXN1-206ENST00000507017 NLRP10Q86W26 655 aa9.83□□□□□ -0.84
SFXN1-206ENST00000507017 NUTM1Q86Y26 1132 aa9.83□□□□□ -0.84
SFXN1-206ENST00000507017 RBM46Q8TBY0 533 aaKnown RBP9.83□□□□□ -0.84
SFXN1-206ENST00000507017 JDP2Q8WYK2 163 aa9.83□□□□□ -0.84
SFXN1-206ENST00000507017 PSMD1Q99460 953 aa9.83□□□□□ -0.84
SFXN1-206ENST00000507017 ABCC12Q96J65 1359 aa9.83□□□□□ -0.84
SFXN1-206ENST00000507017 CACNA1SQ13698 1873 aa9.83□□□□□ -0.84
SFXN1-206ENST00000507017 DICER1Q9UPY3 1922 aaKnown RBP9.82□□□□□ -0.84
SFXN1-206ENST00000507017 PPEF1O14829 653 aaPredicted RBP9.82□□□□□ -0.84
SFXN1-206ENST00000507017 BBOX1O75936 387 aa9.82□□□□□ -0.84
SFXN1-206ENST00000507017 ANXA1P04083 346 aa9.82□□□□□ -0.84
SFXN1-206ENST00000507017 TWISTNBQ3B726 338 aaPredicted RBP9.82□□□□□ -0.84
SFXN1-206ENST00000507017 FAM9BQ8IZU0 186 aa9.82□□□□□ -0.84
SFXN1-206ENST00000507017 ZNF219Q9P2Y4 722 aaPredicted RBP9.82□□□□□ -0.84
SFXN1-206ENST00000507017 KIF3CO14782 793 aa9.81□□□□□ -0.84
SFXN1-206ENST00000507017 KRT24Q2M2I5 525 aa9.81□□□□□ -0.84
SFXN1-206ENST00000507017 CCDC191Q8NCU4 936 aa9.81□□□□□ -0.84
SFXN1-206ENST00000507017 SMC1BQ8NDV3 1235 aa9.81□□□□□ -0.84
SFXN1-206ENST00000507017 SLX4Q8IY92 1834 aa9.81□□□□□ -0.84
SFXN1-206ENST00000507017 CACNA1FO60840 1977 aa9.81□□□□□ -0.84
SFXN1-206ENST00000507017 ELL2O00472 640 aaPredicted RBP9.8□□□□□ -0.84
SFXN1-206ENST00000507017 HSPA6P17066 643 aa9.8□□□□□ -0.84
SFXN1-206ENST00000507017 IARSP41252 1262 aaKnown RBP9.8□□□□□ -0.84
SFXN1-206ENST00000507017 APLP1P51693 650 aa9.8□□□□□ -0.84
SFXN1-206ENST00000507017 EIF6P56537 245 aaKnown RBP9.8□□□□□ -0.84
SFXN1-206ENST00000507017 GRAPQ13588 217 aa9.8□□□□□ -0.84
SFXN1-206ENST00000507017 ZBTB38Q8NAP3 1195 aaPredicted RBP9.8□□□□□ -0.84
SFXN1-206ENST00000507017 GRAPLQ8TC17 118 aaPredicted RBP9.8□□□□□ -0.84
SFXN1-206ENST00000507017 C7orf43Q8WVR3 580 aa9.8□□□□□ -0.84
SFXN1-206ENST00000507017 ISCA1Q9BUE6 129 aa9.8□□□□□ -0.84
SFXN1-206ENST00000507017 CWC25Q9NXE8 425 aaPredicted RBP9.8□□□□□ -0.84
SFXN1-206ENST00000507017 ATP6V0A2Q9Y487 856 aa9.8□□□□□ -0.84
SFXN1-206ENST00000507017 LAMB2P55268 1798 aa9.79□□□□□ -0.84
SFXN1-206ENST00000507017 CCER2I3L3R5 266 aa9.79□□□□□ -0.84
SFXN1-206ENST00000507017 PCCAP05165 728 aaPredicted RBP9.79□□□□□ -0.84
SFXN1-206ENST00000507017 CCDC184Q52MB2 194 aa9.79□□□□□ -0.84
SFXN1-206ENST00000507017 KSR2Q6VAB6 950 aa9.79□□□□□ -0.84
SFXN1-206ENST00000507017 C8orf58Q8NAV2 365 aa9.79□□□□□ -0.84
SFXN1-206ENST00000507017 TSR2Q969E8 191 aaKnown RBP9.79□□□□□ -0.84
SFXN1-206ENST00000507017 METTL22Q9BUU2 404 aaPredicted RBP9.79□□□□□ -0.84
SFXN1-206ENST00000507017 NMRK2Q9NPI5 230 aa9.79□□□□□ -0.84
SFXN1-206ENST00000507017 FANCIQ9NVI1 1328 aa9.79□□□□□ -0.84
SFXN1-206ENST00000507017 WDR90Q96KV7 1748 aa9.79□□□□□ -0.84
SFXN1-206ENST00000507017 CCDC88AQ3V6T2 1871 aa9.79□□□□□ -0.84
SFXN1-206ENST00000507017 IRS4O14654 1257 aaPredicted RBP9.78□□□□□ -0.84
SFXN1-206ENST00000507017 LMOD1P29536 600 aaPredicted RBP9.78□□□□□ -0.84
SFXN1-206ENST00000507017 SF3B3Q15393 1217 aaKnown RBP9.78□□□□□ -0.84
SFXN1-206ENST00000507017 CCDC152Q4G0S7 254 aa9.78□□□□□ -0.84
SFXN1-206ENST00000507017 DPP8Q6V1X1 898 aaPredicted RBP9.78□□□□□ -0.84
SFXN1-206ENST00000507017 SP8Q8IXZ3 490 aa9.78□□□□□ -0.84
SFXN1-206ENST00000507017 NIM1KQ8IY84 436 aa9.78□□□□□ -0.84
SFXN1-206ENST00000507017 SYNE4Q8N205 404 aa9.78□□□□□ -0.84
SFXN1-206ENST00000507017 LARGE2Q8N3Y3 721 aa9.78□□□□□ -0.84
SFXN1-206ENST00000507017 ZNF428Q96B54 188 aa9.78□□□□□ -0.84
SFXN1-206ENST00000507017 MYD88Q99836 296 aa9.78□□□□□ -0.84
SFXN1-206ENST00000507017 ABCC4O15439 1325 aa9.78□□□□□ -0.84
SFXN1-206ENST00000507017 CDHR2Q9BYE9 1310 aa9.78□□□□□ -0.84
SFXN1-206ENST00000507017 GOLGB1Q14789 3259 aaKnown RBP9.77□□□□□ -0.85
SFXN1-206ENST00000507017 ATP5J2-PTCD1G3V325 749 aa9.77□□□□□ -0.85
SFXN1-206ENST00000507017 PDE8AO60658 829 aa9.77□□□□□ -0.85
SFXN1-206ENST00000507017 SLC4A2P04920 1241 aa9.77□□□□□ -0.85
SFXN1-206ENST00000507017 HCLS1P14317 486 aaPredicted RBP9.77□□□□□ -0.85
SFXN1-206ENST00000507017 FKBP5Q13451 457 aaPredicted RBP9.77□□□□□ -0.85
SFXN1-206ENST00000507017 PNMA8AQ86V59 439 aaPredicted RBP9.77□□□□□ -0.85
SFXN1-206ENST00000507017 GPC2Q8N158 579 aa9.77□□□□□ -0.85
SFXN1-206ENST00000507017 MPNDQ8N594 471 aa9.77□□□□□ -0.85
SFXN1-206ENST00000507017 L3MBTL3Q96JM7 780 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms