RNA–Protein interactions for RNA: ENST00000506696.1

SNCB-203, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNCB, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-203ENST00000506696 CHL1O00533 1208 aa18.01■□□□□ 0.47
SNCB-203ENST00000506696 FKBP4Q02790 459 aaKnown RBP eCLIP18.01■□□□□ 0.47
SNCB-203ENST00000506696 CRY2Q49AN0 593 aa18.01■□□□□ 0.47
SNCB-203ENST00000506696 DPY19L2Q6NUT2 758 aa18.01■□□□□ 0.47
SNCB-203ENST00000506696 COPS6Q7L5N1 327 aa18.01■□□□□ 0.47
SNCB-203ENST00000506696 RPGRQ92834 1020 aaKnown RBP18.01■□□□□ 0.47
SNCB-203ENST00000506696 CHPF2Q9P2E5 772 aa18.01■□□□□ 0.47
SNCB-203ENST00000506696 COL4A5P29400 1685 aa18.01■□□□□ 0.47
SNCB-203ENST00000506696 IBTKQ9P2D0 1353 aaPredicted RBP18.01■□□□□ 0.47
SNCB-203ENST00000506696 SNED1Q8TER0 1413 aa18■□□□□ 0.47
SNCB-203ENST00000506696 SYNE4Q8N205 404 aa18■□□□□ 0.47
SNCB-203ENST00000506696 BABAM1Q9NWV8 329 aa18■□□□□ 0.47
SNCB-203ENST00000506696 ANKRD36CQ5JPF3 1778 aa17.99■□□□□ 0.47
SNCB-203ENST00000506696 RIC1Q4ADV7 1423 aa17.98■□□□□ 0.47
SNCB-203ENST00000506696 APAF1O14727 1248 aa17.98■□□□□ 0.47
SNCB-203ENST00000506696 ALDH1B1P30837 517 aa17.98■□□□□ 0.47
SNCB-203ENST00000506696 CCDC184Q52MB2 194 aa17.98■□□□□ 0.47
SNCB-203ENST00000506696 HDGFL1Q5TGJ6 251 aa17.98■□□□□ 0.47
SNCB-203ENST00000506696 HCLS1P14317 486 aaPredicted RBP17.97■□□□□ 0.47
SNCB-203ENST00000506696 PPP1R42Q7Z4L9 355 aa17.97■□□□□ 0.47
SNCB-203ENST00000506696 RTKN2Q8IZC4 609 aa17.97■□□□□ 0.47
SNCB-203ENST00000506696 UTP14AQ9BVJ6 771 aaKnown RBP17.97■□□□□ 0.47
SNCB-203ENST00000506696 MBIPQ9NS73 344 aa17.97■□□□□ 0.47
SNCB-203ENST00000506696 LAMB2P55268 1798 aa17.96■□□□□ 0.47
SNCB-203ENST00000506696 PPEF1O14829 653 aaPredicted RBP17.96■□□□□ 0.47
SNCB-203ENST00000506696 HOXA10P31260 410 aaPredicted RBP17.96■□□□□ 0.47
SNCB-203ENST00000506696 IARSP41252 1262 aaKnown RBP17.96■□□□□ 0.47
SNCB-203ENST00000506696 PARP10Q53GL7 1025 aa17.96■□□□□ 0.47
SNCB-203ENST00000506696 NLRP10Q86W26 655 aa17.96■□□□□ 0.47
SNCB-203ENST00000506696 DDX21Q9NR30 783 aaKnown RBP eCLIP17.96■□□□□ 0.47
SNCB-203ENST00000506696 KLRG1Q96E93 195 aa17.95■□□□□ 0.46
SNCB-203ENST00000506696 RBM17Q96I25 401 aaKnown RBP17.95■□□□□ 0.46
SNCB-203ENST00000506696 PCNTO95613 3336 aa17.94■□□□□ 0.46
SNCB-203ENST00000506696 DUSP27Q5VZP5 1158 aa17.94■□□□□ 0.46
SNCB-203ENST00000506696 CFAP44Q96MT7 982 aa17.94■□□□□ 0.46
SNCB-203ENST00000506696 ABCC4O15439 1325 aa17.94■□□□□ 0.46
SNCB-203ENST00000506696 RNF123Q5XPI4 1314 aa17.94■□□□□ 0.46
SNCB-203ENST00000506696 ELL2O00472 640 aaPredicted RBP17.93■□□□□ 0.46
SNCB-203ENST00000506696 NLRP3Q96P20 1036 aa17.93■□□□□ 0.46
SNCB-203ENST00000506696 TRMT112Q9UI30 125 aaKnown RBP17.93■□□□□ 0.46
SNCB-203ENST00000506696 ATP5J2-PTCD1G3V325 749 aa17.92■□□□□ 0.46
SNCB-203ENST00000506696 TCIRG1Q13488 830 aa17.92■□□□□ 0.46
SNCB-203ENST00000506696 EAPPQ56P03 285 aaPredicted RBP17.92■□□□□ 0.46
SNCB-203ENST00000506696 CHADLQ6NUI6 762 aa17.92■□□□□ 0.46
SNCB-203ENST00000506696 L3MBTL3Q96JM7 780 aaPredicted RBP17.92■□□□□ 0.46
SNCB-203ENST00000506696 CRAMP1Q96RY5 1269 aa17.92■□□□□ 0.46
SNCB-203ENST00000506696 PSMD1Q99460 953 aa17.92■□□□□ 0.46
SNCB-203ENST00000506696 TAF1DQ9H5J8 278 aaPredicted RBP17.92■□□□□ 0.46
SNCB-203ENST00000506696 COL4A1P02462 1669 aa17.91■□□□□ 0.46
SNCB-203ENST00000506696 ZNF853P0CG23 659 aa17.91■□□□□ 0.46
SNCB-203ENST00000506696 HSP90AB3PQ58FF7 597 aa17.91■□□□□ 0.46
SNCB-203ENST00000506696 RTL5Q5HYW3 569 aaPredicted RBP17.91■□□□□ 0.46
SNCB-203ENST00000506696 GJA3Q9Y6H8 435 aa17.91■□□□□ 0.46
SNCB-203ENST00000506696 TAF1P21675 1872 aa17.9■□□□□ 0.46
SNCB-203ENST00000506696 DDX60Q8IY21 1712 aaKnown RBP17.9■□□□□ 0.46
SNCB-203ENST00000506696 FZD9O00144 591 aa17.9■□□□□ 0.46
SNCB-203ENST00000506696 SLC10A5Q5PT55 438 aa17.9■□□□□ 0.46
SNCB-203ENST00000506696 LARGE2Q8N3Y3 721 aa17.9■□□□□ 0.46
SNCB-203ENST00000506696 LTBP1Q14766 1721 aa17.89■□□□□ 0.46
SNCB-203ENST00000506696 IQCA1LA6NCM1 817 aa17.89■□□□□ 0.45
SNCB-203ENST00000506696 HOXB7P09629 217 aa17.89■□□□□ 0.45
SNCB-203ENST00000506696 PLBD2Q8NHP8 589 aa17.89■□□□□ 0.45
SNCB-203ENST00000506696 JDP2Q8WYK2 163 aa17.89■□□□□ 0.45
SNCB-203ENST00000506696 DBF4Q9UBU7 674 aaPredicted RBP17.89■□□□□ 0.45
SNCB-203ENST00000506696 SH3TC1Q8TE82 1336 aa17.89■□□□□ 0.45
SNCB-203ENST00000506696 SCN4AP35499 1836 aa17.88■□□□□ 0.45
SNCB-203ENST00000506696 AOC3Q16853 763 aa17.88■□□□□ 0.45
SNCB-203ENST00000506696 CC2D2BQ6DHV5 1058 aa17.88■□□□□ 0.45
SNCB-203ENST00000506696 ANKRD13DQ6ZTN6 518 aa17.88■□□□□ 0.45
SNCB-203ENST00000506696 C8orf58Q8NAV2 365 aa17.88■□□□□ 0.45
SNCB-203ENST00000506696 FAM89AQ96GI7 184 aa17.88■□□□□ 0.45
SNCB-203ENST00000506696 PHAXQ9H814 394 aaKnown RBP17.88■□□□□ 0.45
SNCB-203ENST00000506696 IFT57Q9NWB7 429 aa17.88■□□□□ 0.45
SNCB-203ENST00000506696 HACL1Q9UJ83 578 aa17.88■□□□□ 0.45
SNCB-203ENST00000506696 ATP6V0A2Q9Y487 856 aa17.88■□□□□ 0.45
SNCB-203ENST00000506696 PPIP5K2O43314 1243 aa17.87■□□□□ 0.45
SNCB-203ENST00000506696 EPHX2P34913 555 aa17.87■□□□□ 0.45
SNCB-203ENST00000506696 TSR2Q969E8 191 aaKnown RBP17.87■□□□□ 0.45
SNCB-203ENST00000506696 ISCA1Q9BUE6 129 aa17.87■□□□□ 0.45
SNCB-203ENST00000506696 CLEC11AQ9Y240 323 aa17.87■□□□□ 0.45
SNCB-203ENST00000506696 ADAMTSL1Q8N6G6 1762 aa17.86■□□□□ 0.45
SNCB-203ENST00000506696 GNAI1P63096 354 aa17.86■□□□□ 0.45
SNCB-203ENST00000506696 LDHDQ86WU2 507 aa17.86■□□□□ 0.45
SNCB-203ENST00000506696 JMYQ8N9B5 988 aa17.86■□□□□ 0.45
SNCB-203ENST00000506696 HYPKQ9NX55 129 aa17.86■□□□□ 0.45
SNCB-203ENST00000506696 EIF6P56537 245 aaKnown RBP17.85■□□□□ 0.45
SNCB-203ENST00000506696 MAP1SQ66K74 1059 aaPredicted RBP17.85■□□□□ 0.45
SNCB-203ENST00000506696 DDX46Q7L014 1031 aaKnown RBP17.85■□□□□ 0.45
SNCB-203ENST00000506696 NIM1KQ8IY84 436 aa17.85■□□□□ 0.45
SNCB-203ENST00000506696 GPC2Q8N158 579 aa17.85■□□□□ 0.45
SNCB-203ENST00000506696 TSPYL6Q8N831 410 aa17.85■□□□□ 0.45
SNCB-203ENST00000506696 JARID2Q92833 1246 aaPredicted RBP17.85■□□□□ 0.45
SNCB-203ENST00000506696 DUOX1Q9NRD9 1551 aa17.85■□□□□ 0.45
SNCB-203ENST00000506696 MKRN1Q9UHC7 482 aaKnown RBP17.85■□□□□ 0.45
SNCB-203ENST00000506696 GRAPQ13588 217 aa17.84■□□□□ 0.45
SNCB-203ENST00000506696 DPP8Q6V1X1 898 aaPredicted RBP17.84■□□□□ 0.45
SNCB-203ENST00000506696 GRAPLQ8TC17 118 aaPredicted RBP17.84■□□□□ 0.45
SNCB-203ENST00000506696 PASKQ96RG2 1323 aa17.83■□□□□ 0.44
SNCB-203ENST00000506696 EPS15P42566 896 aa17.83■□□□□ 0.44
SNCB-203ENST00000506696 SCNN1DP51172 638 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms