RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 TSR2Q969E8 191 aaKnown RBP9.38□□□□□ -0.91
GYPB-206ENST00000506516 SETDB2Q96T68 719 aa9.38□□□□□ -0.91
GYPB-206ENST00000506516 BCL2L12Q9HB09 334 aa9.38□□□□□ -0.91
GYPB-206ENST00000506516 DDX21Q9NR30 783 aaKnown RBP eCLIP9.38□□□□□ -0.91
GYPB-206ENST00000506516 DBF4Q9UBU7 674 aaPredicted RBP9.38□□□□□ -0.91
GYPB-206ENST00000506516 KDM3BQ7LBC6 1761 aa9.37□□□□□ -0.91
GYPB-206ENST00000506516 MYH14Q7Z406 1995 aaKnown RBP9.37□□□□□ -0.91
GYPB-206ENST00000506516 CAMTA2O94983 1202 aa9.37□□□□□ -0.91
GYPB-206ENST00000506516 NFIXQ14938 502 aa9.37□□□□□ -0.91
GYPB-206ENST00000506516 TBC1D9BQ66K14 1250 aa9.37□□□□□ -0.91
GYPB-206ENST00000506516 BICDL1Q6ZP65 573 aa9.37□□□□□ -0.91
GYPB-206ENST00000506516 C8orf58Q8NAV2 365 aa9.37□□□□□ -0.91
GYPB-206ENST00000506516 OTUD5Q96G74 571 aa9.37□□□□□ -0.91
GYPB-206ENST00000506516 MYH16Q9H6N6 1097 aa9.37□□□□□ -0.91
GYPB-206ENST00000506516 POLRMTO00411 1230 aaKnown RBP9.36□□□□□ -0.91
GYPB-206ENST00000506516 NPHP1O15259 732 aa9.36□□□□□ -0.91
GYPB-206ENST00000506516 SERPINB2P05120 415 aa9.36□□□□□ -0.91
GYPB-206ENST00000506516 TGFB2P61812 414 aa9.36□□□□□ -0.91
GYPB-206ENST00000506516 PDIA6Q15084 440 aa9.36□□□□□ -0.91
GYPB-206ENST00000506516 CCDC30Q5VVM6 783 aa9.36□□□□□ -0.91
GYPB-206ENST00000506516 COPS6Q7L5N1 327 aa9.36□□□□□ -0.91
GYPB-206ENST00000506516 WDR70Q9NW82 654 aa9.36□□□□□ -0.91
GYPB-206ENST00000506516 HYPKQ9NX55 129 aa9.36□□□□□ -0.91
GYPB-206ENST00000506516 CHPF2Q9P2E5 772 aa9.36□□□□□ -0.91
GYPB-206ENST00000506516 MAP3K15Q6ZN16 1313 aa9.35□□□□□ -0.91
GYPB-206ENST00000506516 DDR1Q08345 913 aa9.35□□□□□ -0.91
GYPB-206ENST00000506516 AIMP1Q12904 312 aaKnown RBP9.35□□□□□ -0.91
GYPB-206ENST00000506516 GPR162Q16538 588 aa9.35□□□□□ -0.91
GYPB-206ENST00000506516 TWISTNBQ3B726 338 aaPredicted RBP9.35□□□□□ -0.91
GYPB-206ENST00000506516 TPTE2Q6XPS3 522 aa9.35□□□□□ -0.91
GYPB-206ENST00000506516 TTLL7Q6ZT98 887 aa9.35□□□□□ -0.91
GYPB-206ENST00000506516 STK31Q9BXU1 1019 aa9.35□□□□□ -0.91
GYPB-206ENST00000506516 NIP7Q9Y221 180 aaKnown RBP eCLIP9.35□□□□□ -0.91
GYPB-206ENST00000506516 COL24A1Q17RW2 1714 aa9.34□□□□□ -0.91
GYPB-206ENST00000506516 E9PSI1 815 aa9.34□□□□□ -0.91
GYPB-206ENST00000506516 ANXA1P04083 346 aa9.34□□□□□ -0.91
GYPB-206ENST00000506516 GTF2E1P29083 439 aaPredicted RBP9.34□□□□□ -0.91
GYPB-206ENST00000506516 HLFQ16534 295 aa9.34□□□□□ -0.91
GYPB-206ENST00000506516 PROSER3Q2NL68 480 aa9.34□□□□□ -0.91
GYPB-206ENST00000506516 HSP90AB3PQ58FF7 597 aa9.34□□□□□ -0.91
GYPB-206ENST00000506516 GIGYF2Q6Y7W6 1299 aaKnown RBP9.34□□□□□ -0.91
GYPB-206ENST00000506516 TSPYL6Q8N831 410 aa9.34□□□□□ -0.91
GYPB-206ENST00000506516 NLGN2Q8NFZ4 835 aa9.34□□□□□ -0.91
GYPB-206ENST00000506516 XAGE3Q8WTP9 111 aa9.34□□□□□ -0.91
GYPB-206ENST00000506516 ZBTB3Q9H5J0 574 aa9.34□□□□□ -0.91
GYPB-206ENST00000506516 PDZRN3Q9UPQ7 1066 aa9.34□□□□□ -0.91
GYPB-206ENST00000506516 CARMIL3Q8ND23 1372 aa9.34□□□□□ -0.91
GYPB-206ENST00000506516 FANCIQ9NVI1 1328 aa9.33□□□□□ -0.92
GYPB-206ENST00000506516 SEC24BO95487 1268 aa9.33□□□□□ -0.92
GYPB-206ENST00000506516 POTEJP0CG39 1038 aa9.33□□□□□ -0.92
GYPB-206ENST00000506516 ST5P78524 1137 aa9.33□□□□□ -0.92
GYPB-206ENST00000506516 EXOSC9Q06265 439 aaKnown RBP9.33□□□□□ -0.92
GYPB-206ENST00000506516 ANKRD13DQ6ZTN6 518 aa9.33□□□□□ -0.92
GYPB-206ENST00000506516 LRP10Q7Z4F1 713 aa9.33□□□□□ -0.92
GYPB-206ENST00000506516 NBPF5PQ86XG9 351 aaPredicted RBP9.33□□□□□ -0.92
GYPB-206ENST00000506516 CNBD1Q8NA66 436 aa9.33□□□□□ -0.92
GYPB-206ENST00000506516 NYXQ9GZU5 481 aa9.33□□□□□ -0.92
GYPB-206ENST00000506516 COLQQ9Y215 455 aaPredicted RBP9.33□□□□□ -0.92
GYPB-206ENST00000506516 ZNF521Q96K83 1311 aa9.32□□□□□ -0.92
GYPB-206ENST00000506516 C4AP0C0L4 1744 aa9.32□□□□□ -0.92
GYPB-206ENST00000506516 A0A0G2JLW4 131 aa9.32□□□□□ -0.92
GYPB-206ENST00000506516 GRIN3BO60391 1043 aa9.32□□□□□ -0.92
GYPB-206ENST00000506516 VAMP4O75379 141 aa9.32□□□□□ -0.92
GYPB-206ENST00000506516 DDX58O95786 925 aaKnown RBP9.32□□□□□ -0.92
GYPB-206ENST00000506516 PDE6BP35913 854 aa9.32□□□□□ -0.92
GYPB-206ENST00000506516 NBR1Q14596 966 aa9.32□□□□□ -0.92
GYPB-206ENST00000506516 PPP1R42Q7Z4L9 355 aa9.32□□□□□ -0.92
GYPB-206ENST00000506516 RIC3Q7Z5B4 369 aa9.32□□□□□ -0.92
GYPB-206ENST00000506516 PLBD2Q8NHP8 589 aa9.32□□□□□ -0.92
GYPB-206ENST00000506516 BRIP1Q9BX63 1249 aa9.32□□□□□ -0.92
GYPB-206ENST00000506516 FAM177BA6PVY3 158 aa9.31□□□□□ -0.92
GYPB-206ENST00000506516 H0YIN7 160 aa9.31□□□□□ -0.92
GYPB-206ENST00000506516 DPEP1P16444 411 aa9.31□□□□□ -0.92
GYPB-206ENST00000506516 GPTP24298 496 aa9.31□□□□□ -0.92
GYPB-206ENST00000506516 SLFN5Q08AF3 891 aa9.31□□□□□ -0.92
GYPB-206ENST00000506516 TCIRG1Q13488 830 aa9.31□□□□□ -0.92
GYPB-206ENST00000506516 PARP10Q53GL7 1025 aa9.31□□□□□ -0.92
GYPB-206ENST00000506516 PRR5LQ6MZQ0 368 aa9.31□□□□□ -0.92
GYPB-206ENST00000506516 MAMSTRQ6ZN01 415 aa9.31□□□□□ -0.92
GYPB-206ENST00000506516 ZNF34Q8IZ26 560 aa9.31□□□□□ -0.92
GYPB-206ENST00000506516 PHAXQ9H814 394 aaKnown RBP9.31□□□□□ -0.92
GYPB-206ENST00000506516 PIM2Q9P1W9 311 aa9.31□□□□□ -0.92
GYPB-206ENST00000506516 LAMB4A4D0S4 1761 aa9.31□□□□□ -0.92
GYPB-206ENST00000506516 IRX5P78411 483 aaPredicted RBP9.3□□□□□ -0.92
GYPB-206ENST00000506516 HNRNPUQ00839 825 aaKnown RBP eCLIP9.3□□□□□ -0.92
GYPB-206ENST00000506516 C2CD5Q86YS7 1000 aa9.3□□□□□ -0.92
GYPB-206ENST00000506516 UTP14AQ9BVJ6 771 aaKnown RBP9.3□□□□□ -0.92
GYPB-206ENST00000506516 C10orf71Q711Q0 1435 aa9.3□□□□□ -0.92
GYPB-206ENST00000506516 TCERG1O14776 1098 aaKnown RBP9.29□□□□□ -0.92
GYPB-206ENST00000506516 CHRNA5P30532 468 aa9.29□□□□□ -0.92
GYPB-206ENST00000506516 DALRD3Q5D0E6 543 aaKnown RBP9.29□□□□□ -0.92
GYPB-206ENST00000506516 SUSD4Q5VX71 490 aa9.29□□□□□ -0.92
GYPB-206ENST00000506516 DPY19L2Q6NUT2 758 aa9.29□□□□□ -0.92
GYPB-206ENST00000506516 CCDC24Q8N4L8 307 aa9.29□□□□□ -0.92
GYPB-206ENST00000506516 PDCD7Q8N8D1 485 aaKnown RBP9.29□□□□□ -0.92
GYPB-206ENST00000506516 OCEL1Q9H607 264 aa9.29□□□□□ -0.92
GYPB-206ENST00000506516 BCS1LQ9Y276 419 aa9.29□□□□□ -0.92
GYPB-206ENST00000506516 ATP10DQ9P241 1426 aa9.29□□□□□ -0.92
GYPB-206ENST00000506516 KCNA3P22001 575 aa9.28□□□□□ -0.92
GYPB-206ENST00000506516 NEXNQ0ZGT2 675 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 213.4 ms