RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 RIC1Q4ADV7 1423 aa15.75■□□□□ 0.11
PDLIM7-214ENST00000505746 ANXA1P04083 346 aa15.74■□□□□ 0.11
PDLIM7-214ENST00000505746 IARSP41252 1262 aaKnown RBP15.74■□□□□ 0.11
PDLIM7-214ENST00000505746 PROSER3Q2NL68 480 aa15.74■□□□□ 0.11
PDLIM7-214ENST00000505746 IFFO2Q5TF58 517 aa15.74■□□□□ 0.11
PDLIM7-214ENST00000505746 COPS6Q7L5N1 327 aa15.74■□□□□ 0.11
PDLIM7-214ENST00000505746 NECTIN2Q92692 538 aa15.74■□□□□ 0.11
PDLIM7-214ENST00000505746 CRAMP1Q96RY5 1269 aa15.74■□□□□ 0.11
PDLIM7-214ENST00000505746 PRKRIP1Q9H875 184 aaPredicted RBP15.74■□□□□ 0.11
PDLIM7-214ENST00000505746 DDX21Q9NR30 783 aaKnown RBP eCLIP15.74■□□□□ 0.11
PDLIM7-214ENST00000505746 WDR90Q96KV7 1748 aa15.74■□□□□ 0.11
PDLIM7-214ENST00000505746 AIMP1Q12904 312 aaKnown RBP15.73■□□□□ 0.11
PDLIM7-214ENST00000505746 SLC10A5Q5PT55 438 aa15.73■□□□□ 0.11
PDLIM7-214ENST00000505746 CHADLQ6NUI6 762 aa15.73■□□□□ 0.11
PDLIM7-214ENST00000505746 XAGE3Q8WTP9 111 aa15.73■□□□□ 0.11
PDLIM7-214ENST00000505746 JDP2Q8WYK2 163 aa15.73■□□□□ 0.11
PDLIM7-214ENST00000505746 L3MBTL3Q96JM7 780 aaPredicted RBP15.73■□□□□ 0.11
PDLIM7-214ENST00000505746 TMX4Q9H1E5 349 aaPredicted RBP15.73■□□□□ 0.11
PDLIM7-214ENST00000505746 ARFGEF2Q9Y6D5 1785 aa15.72■□□□□ 0.11
PDLIM7-214ENST00000505746 RNF123Q5XPI4 1314 aa15.72■□□□□ 0.11
PDLIM7-214ENST00000505746 HOXB7P09629 217 aa15.72■□□□□ 0.11
PDLIM7-214ENST00000505746 JMYQ8N9B5 988 aa15.72■□□□□ 0.11
PDLIM7-214ENST00000505746 FZD9O00144 591 aa15.71■□□□□ 0.11
PDLIM7-214ENST00000505746 PPEF1O14829 653 aaPredicted RBP15.71■□□□□ 0.11
PDLIM7-214ENST00000505746 KRT24Q2M2I5 525 aa15.71■□□□□ 0.11
PDLIM7-214ENST00000505746 CFAP44Q96MT7 982 aa15.71■□□□□ 0.11
PDLIM7-214ENST00000505746 TAF1DQ9H5J8 278 aaPredicted RBP15.71■□□□□ 0.11
PDLIM7-214ENST00000505746 ZNF541Q9H0D2 1346 aa15.7■□□□□ 0.1
PDLIM7-214ENST00000505746 TCIRG1Q13488 830 aa15.7■□□□□ 0.1
PDLIM7-214ENST00000505746 HDGFL1Q5TGJ6 251 aa15.7■□□□□ 0.1
PDLIM7-214ENST00000505746 NLRP10Q86W26 655 aa15.7■□□□□ 0.1
PDLIM7-214ENST00000505746 LDHDQ86WU2 507 aa15.7■□□□□ 0.1
PDLIM7-214ENST00000505746 DBF4Q9UBU7 674 aaPredicted RBP15.7■□□□□ 0.1
PDLIM7-214ENST00000505746 HACL1Q9UJ83 578 aa15.7■□□□□ 0.1
PDLIM7-214ENST00000505746 TCERG1O14776 1098 aaKnown RBP15.69■□□□□ 0.1
PDLIM7-214ENST00000505746 EIF6P56537 245 aaKnown RBP15.69■□□□□ 0.1
PDLIM7-214ENST00000505746 C3orf67Q6ZVT6 689 aa15.69■□□□□ 0.1
PDLIM7-214ENST00000505746 GPC2Q8N158 579 aa15.69■□□□□ 0.1
PDLIM7-214ENST00000505746 CHPF2Q9P2E5 772 aa15.69■□□□□ 0.1
PDLIM7-214ENST00000505746 TRMT112Q9UI30 125 aaKnown RBP15.69■□□□□ 0.1
PDLIM7-214ENST00000505746 CCDC88AQ3V6T2 1871 aa15.69■□□□□ 0.1
PDLIM7-214ENST00000505746 SNED1Q8TER0 1413 aa15.68■□□□□ 0.1
PDLIM7-214ENST00000505746 BBOX1O75936 387 aa15.68■□□□□ 0.1
PDLIM7-214ENST00000505746 POTEIP0CG38 1075 aa15.68■□□□□ 0.1
PDLIM7-214ENST00000505746 POTEJP0CG39 1038 aa15.68■□□□□ 0.1
PDLIM7-214ENST00000505746 CALD1Q05682 793 aaKnown RBP15.68■□□□□ 0.1
PDLIM7-214ENST00000505746 PNMA8AQ86V59 439 aaPredicted RBP15.68■□□□□ 0.1
PDLIM7-214ENST00000505746 PLBD2Q8NHP8 589 aa15.68■□□□□ 0.1
PDLIM7-214ENST00000505746 ATP6V0A2Q9Y487 856 aa15.68■□□□□ 0.1
PDLIM7-214ENST00000505746 DICER1Q9UPY3 1922 aaKnown RBP15.68■□□□□ 0.1
PDLIM7-214ENST00000505746 NUP98P52948 1817 aa15.68■□□□□ 0.1
PDLIM7-214ENST00000505746 SH3TC1Q8TE82 1336 aa15.68■□□□□ 0.1
PDLIM7-214ENST00000505746 EPHX2P34913 555 aa15.67■□□□□ 0.1
PDLIM7-214ENST00000505746 EAPPQ56P03 285 aaPredicted RBP15.67■□□□□ 0.1
PDLIM7-214ENST00000505746 DUSP27Q5VZP5 1158 aa15.67■□□□□ 0.1
PDLIM7-214ENST00000505746 ANKRD13DQ6ZTN6 518 aa15.67■□□□□ 0.1
PDLIM7-214ENST00000505746 LARGE2Q8N3Y3 721 aa15.67■□□□□ 0.1
PDLIM7-214ENST00000505746 VPS33BQ9H267 617 aa15.67■□□□□ 0.1
PDLIM7-214ENST00000505746 CREBZFQ9NS37 354 aa15.67■□□□□ 0.1
PDLIM7-214ENST00000505746 HYPKQ9NX55 129 aa15.67■□□□□ 0.1
PDLIM7-214ENST00000505746 CACNA1SQ13698 1873 aa15.66■□□□□ 0.1
PDLIM7-214ENST00000505746 APAF1O14727 1248 aa15.66■□□□□ 0.1
PDLIM7-214ENST00000505746 HCLS1P14317 486 aaPredicted RBP15.66■□□□□ 0.1
PDLIM7-214ENST00000505746 DDX46Q7L014 1031 aaKnown RBP15.66■□□□□ 0.1
PDLIM7-214ENST00000505746 SUPT20HQ8NEM7 779 aa15.66■□□□□ 0.1
PDLIM7-214ENST00000505746 MBIPQ9NS73 344 aa15.66■□□□□ 0.1
PDLIM7-214ENST00000505746 CLEC11AQ9Y240 323 aa15.66■□□□□ 0.1
PDLIM7-214ENST00000505746 ABCC4O15439 1325 aa15.66■□□□□ 0.1
PDLIM7-214ENST00000505746 ZNF853P0CG23 659 aa15.65■□□□□ 0.1
PDLIM7-214ENST00000505746 GNAI1P63096 354 aa15.65■□□□□ 0.1
PDLIM7-214ENST00000505746 SP8Q8IXZ3 490 aa15.65■□□□□ 0.1
PDLIM7-214ENST00000505746 NIM1KQ8IY84 436 aa15.65■□□□□ 0.1
PDLIM7-214ENST00000505746 IFT57Q9NWB7 429 aa15.65■□□□□ 0.1
PDLIM7-214ENST00000505746 GJA3Q9Y6H8 435 aa15.65■□□□□ 0.1
PDLIM7-214ENST00000505746 PPIP5K2O43314 1243 aa15.64■□□□□ 0.09
PDLIM7-214ENST00000505746 LMOD1P29536 600 aaPredicted RBP15.64■□□□□ 0.09
PDLIM7-214ENST00000505746 GRAPQ13588 217 aa15.63■□□□□ 0.09
PDLIM7-214ENST00000505746 DPP8Q6V1X1 898 aaPredicted RBP15.63■□□□□ 0.09
PDLIM7-214ENST00000505746 TMC4Q7Z404 712 aa15.63■□□□□ 0.09
PDLIM7-214ENST00000505746 MPNDQ8N594 471 aa15.63■□□□□ 0.09
PDLIM7-214ENST00000505746 GRAPLQ8TC17 118 aaPredicted RBP15.63■□□□□ 0.09
PDLIM7-214ENST00000505746 ISCA1Q9BUE6 129 aa15.63■□□□□ 0.09
PDLIM7-214ENST00000505746 RTFDC1Q9BY42 306 aaPredicted RBP15.63■□□□□ 0.09
PDLIM7-214ENST00000505746 CHMP4AQ9BY43 222 aa15.63■□□□□ 0.09
PDLIM7-214ENST00000505746 PASKQ96RG2 1323 aa15.63■□□□□ 0.09
PDLIM7-214ENST00000505746 ITGBL1O95965 494 aaPredicted RBP15.62■□□□□ 0.09
PDLIM7-214ENST00000505746 AOC3Q16853 763 aa15.62■□□□□ 0.09
PDLIM7-214ENST00000505746 TMEM88BA6NKF7 163 aa15.61■□□□□ 0.09
PDLIM7-214ENST00000505746 ATP5J2-PTCD1G3V325 749 aa15.61■□□□□ 0.09
PDLIM7-214ENST00000505746 GOLGA2Q08379 1002 aa15.61■□□□□ 0.09
PDLIM7-214ENST00000505746 TRIM28Q13263 835 aaKnown RBP15.61■□□□□ 0.09
PDLIM7-214ENST00000505746 RIC3Q7Z5B4 369 aa15.61■□□□□ 0.09
PDLIM7-214ENST00000505746 SLC51AQ86UW1 340 aa15.61■□□□□ 0.09
PDLIM7-214ENST00000505746 CNTROBQ8N137 903 aa15.61■□□□□ 0.09
PDLIM7-214ENST00000505746 FAM89AQ96GI7 184 aa15.61■□□□□ 0.09
PDLIM7-214ENST00000505746 MKRN1Q9UHC7 482 aaKnown RBP15.61■□□□□ 0.09
PDLIM7-214ENST00000505746 ZNRF3Q9ULT6 936 aa15.61■□□□□ 0.09
PDLIM7-214ENST00000505746 SCN4AP35499 1836 aa15.6■□□□□ 0.09
PDLIM7-214ENST00000505746 ELL2O00472 640 aaPredicted RBP15.6■□□□□ 0.09
PDLIM7-214ENST00000505746 SF3B3Q15393 1217 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms