RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 MBIPQ9NS73 344 aa29.58■■■□□ 2.33
CDC42SE2-207ENST00000504701 DDNO94850 711 aaPredicted RBP29.57■■■□□ 2.32
CDC42SE2-207ENST00000504701 VEGFAP15692 232 aaPredicted RBP29.57■■■□□ 2.32
CDC42SE2-207ENST00000504701 APLP1P51693 650 aa29.57■■■□□ 2.32
CDC42SE2-207ENST00000504701 FKBP4Q02790 459 aaKnown RBP eCLIP29.57■■■□□ 2.32
CDC42SE2-207ENST00000504701 SYNE4Q8N205 404 aa29.57■■■□□ 2.32
CDC42SE2-207ENST00000504701 DDX21Q9NR30 783 aaKnown RBP eCLIP29.57■■■□□ 2.32
CDC42SE2-207ENST00000504701 ALDH1B1P30837 517 aa29.56■■■□□ 2.32
CDC42SE2-207ENST00000504701 CFAP44Q96MT7 982 aa29.56■■■□□ 2.32
CDC42SE2-207ENST00000504701 HDGFL1Q5TGJ6 251 aa29.55■■■□□ 2.32
CDC42SE2-207ENST00000504701 COL4A5P29400 1685 aa29.54■■■□□ 2.32
CDC42SE2-207ENST00000504701 ZNF853P0CG23 659 aa29.54■■■□□ 2.32
CDC42SE2-207ENST00000504701 FSTL1Q12841 308 aa29.54■■■□□ 2.32
CDC42SE2-207ENST00000504701 PARP10Q53GL7 1025 aa29.54■■■□□ 2.32
CDC42SE2-207ENST00000504701 DPY19L2Q6NUT2 758 aa29.54■■■□□ 2.32
CDC42SE2-207ENST00000504701 PPP1R42Q7Z4L9 355 aa29.54■■■□□ 2.32
CDC42SE2-207ENST00000504701 RPGRQ92834 1020 aaKnown RBP29.54■■■□□ 2.32
CDC42SE2-207ENST00000504701 ZNF541Q9H0D2 1346 aa29.53■■■□□ 2.32
CDC42SE2-207ENST00000504701 TCERG1O14776 1098 aaKnown RBP29.53■■■□□ 2.32
CDC42SE2-207ENST00000504701 DUSP27Q5VZP5 1158 aa29.53■■■□□ 2.32
CDC42SE2-207ENST00000504701 UTP14AQ9BVJ6 771 aaKnown RBP29.53■■■□□ 2.32
CDC42SE2-207ENST00000504701 HOXA10P31260 410 aaPredicted RBP29.52■■■□□ 2.32
CDC42SE2-207ENST00000504701 NLRP10Q86W26 655 aa29.52■■■□□ 2.32
CDC42SE2-207ENST00000504701 DNAJC5GQ8N7S2 189 aa29.52■■■□□ 2.32
CDC42SE2-207ENST00000504701 SMC1BQ8NDV3 1235 aa29.51■■■□□ 2.31
CDC42SE2-207ENST00000504701 TAF1P21675 1872 aa29.51■■■□□ 2.31
CDC42SE2-207ENST00000504701 POTEIP0CG38 1075 aa29.5■■■□□ 2.31
CDC42SE2-207ENST00000504701 POTEJP0CG39 1038 aa29.5■■■□□ 2.31
CDC42SE2-207ENST00000504701 HCLS1P14317 486 aaPredicted RBP29.5■■■□□ 2.31
CDC42SE2-207ENST00000504701 RTKN2Q8IZC4 609 aa29.5■■■□□ 2.31
CDC42SE2-207ENST00000504701 ELL2O00472 640 aaPredicted RBP29.49■■■□□ 2.31
CDC42SE2-207ENST00000504701 TCIRG1Q13488 830 aa29.49■■■□□ 2.31
CDC42SE2-207ENST00000504701 IARSP41252 1262 aaKnown RBP29.48■■■□□ 2.31
CDC42SE2-207ENST00000504701 RBM17Q96I25 401 aaKnown RBP29.48■■■□□ 2.31
CDC42SE2-207ENST00000504701 DDX60Q8IY21 1712 aaKnown RBP29.48■■■□□ 2.31
CDC42SE2-207ENST00000504701 PPEF1O14829 653 aaPredicted RBP29.47■■■□□ 2.31
CDC42SE2-207ENST00000504701 HOXB7P09629 217 aa29.47■■■□□ 2.31
CDC42SE2-207ENST00000504701 SLC10A5Q5PT55 438 aa29.47■■■□□ 2.31
CDC42SE2-207ENST00000504701 CRAMP1Q96RY5 1269 aa29.47■■■□□ 2.31
CDC42SE2-207ENST00000504701 IFT57Q9NWB7 429 aa29.47■■■□□ 2.31
CDC42SE2-207ENST00000504701 HSP90AB3PQ58FF7 597 aa29.46■■■□□ 2.31
CDC42SE2-207ENST00000504701 NLRP3Q96P20 1036 aa29.46■■■□□ 2.31
CDC42SE2-207ENST00000504701 ABCC4O15439 1325 aa29.45■■■□□ 2.31
CDC42SE2-207ENST00000504701 DBF4Q9UBU7 674 aaPredicted RBP29.45■■■□□ 2.31
CDC42SE2-207ENST00000504701 TRMT112Q9UI30 125 aaKnown RBP29.45■■■□□ 2.31
CDC42SE2-207ENST00000504701 ATP5J2-PTCD1G3V325 749 aa29.44■■■□□ 2.3
CDC42SE2-207ENST00000504701 ZEB1P37275 1124 aaPredicted RBP29.44■■■□□ 2.3
CDC42SE2-207ENST00000504701 C8orf58Q8NAV2 365 aa29.44■■■□□ 2.3
CDC42SE2-207ENST00000504701 PLBD2Q8NHP8 589 aa29.44■■■□□ 2.3
CDC42SE2-207ENST00000504701 PSMD1Q99460 953 aa29.44■■■□□ 2.3
CDC42SE2-207ENST00000504701 COL4A1P02462 1669 aa29.44■■■□□ 2.3
CDC42SE2-207ENST00000504701 ANKRD13DQ6ZTN6 518 aa29.43■■■□□ 2.3
CDC42SE2-207ENST00000504701 PHAXQ9H814 394 aaKnown RBP29.43■■■□□ 2.3
CDC42SE2-207ENST00000504701 GNAI1P63096 354 aa29.42■■■□□ 2.3
CDC42SE2-207ENST00000504701 SCN4AP35499 1836 aa29.42■■■□□ 2.3
CDC42SE2-207ENST00000504701 ISCA1Q9BUE6 129 aa29.41■■■□□ 2.3
CDC42SE2-207ENST00000504701 ZNF316A6NFI3 1004 aaPredicted RBP29.4■■■□□ 2.3
CDC42SE2-207ENST00000504701 FZD9O00144 591 aa29.4■■■□□ 2.3
CDC42SE2-207ENST00000504701 TSPYL6Q8N831 410 aa29.4■■■□□ 2.3
CDC42SE2-207ENST00000504701 L3MBTL3Q96JM7 780 aaPredicted RBP29.4■■■□□ 2.3
CDC42SE2-207ENST00000504701 HYPKQ9NX55 129 aa29.4■■■□□ 2.3
CDC42SE2-207ENST00000504701 SH3TC1Q8TE82 1336 aa29.4■■■□□ 2.3
CDC42SE2-207ENST00000504701 RTL5Q5HYW3 569 aaPredicted RBP29.39■■■□□ 2.3
CDC42SE2-207ENST00000504701 CC2D2BQ6DHV5 1058 aa29.39■■■□□ 2.3
CDC42SE2-207ENST00000504701 TSR2Q969E8 191 aaKnown RBP29.39■■■□□ 2.3
CDC42SE2-207ENST00000504701 RNF123Q5XPI4 1314 aa29.39■■■□□ 2.3
CDC42SE2-207ENST00000504701 LTBP1Q14766 1721 aa29.38■■■□□ 2.29
CDC42SE2-207ENST00000504701 FAM89AQ96GI7 184 aa29.38■■■□□ 2.29
CDC42SE2-207ENST00000504701 TAF1DQ9H5J8 278 aaPredicted RBP29.38■■■□□ 2.29
CDC42SE2-207ENST00000504701 ATP6V0A2Q9Y487 856 aa29.37■■■□□ 2.29
CDC42SE2-207ENST00000504701 CALD1Q05682 793 aaKnown RBP29.36■■■□□ 2.29
CDC42SE2-207ENST00000504701 KLRG1Q96E93 195 aa29.36■■■□□ 2.29
CDC42SE2-207ENST00000504701 CHADLQ6NUI6 762 aa29.35■■■□□ 2.29
CDC42SE2-207ENST00000504701 MRS2Q9HD23 443 aa29.35■■■□□ 2.29
CDC42SE2-207ENST00000504701 ADAMTSL1Q8N6G6 1762 aa29.34■■■□□ 2.29
CDC42SE2-207ENST00000504701 AOC3Q16853 763 aa29.34■■■□□ 2.29
CDC42SE2-207ENST00000504701 LARGE2Q8N3Y3 721 aa29.34■■■□□ 2.29
CDC42SE2-207ENST00000504701 JDP2Q8WYK2 163 aa29.34■■■□□ 2.29
CDC42SE2-207ENST00000504701 GJA3Q9Y6H8 435 aa29.33■■■□□ 2.29
CDC42SE2-207ENST00000504701 DUOX1Q9NRD9 1551 aa29.32■■■□□ 2.28
CDC42SE2-207ENST00000504701 IQCA1LA6NCM1 817 aa29.32■■■□□ 2.28
CDC42SE2-207ENST00000504701 EAPPQ56P03 285 aaPredicted RBP29.32■■■□□ 2.28
CDC42SE2-207ENST00000504701 DDX46Q7L014 1031 aaKnown RBP29.32■■■□□ 2.28
CDC42SE2-207ENST00000504701 RIC3Q7Z5B4 369 aa29.32■■■□□ 2.28
CDC42SE2-207ENST00000504701 WWC1Q8IX03 1113 aa29.32■■■□□ 2.28
CDC42SE2-207ENST00000504701 LRRC37AA6NMS7 1700 aa29.31■■■□□ 2.28
CDC42SE2-207ENST00000504701 PPIP5K2O43314 1243 aa29.31■■■□□ 2.28
CDC42SE2-207ENST00000504701 GRAPQ13588 217 aa29.31■■■□□ 2.28
CDC42SE2-207ENST00000504701 GRAPLQ8TC17 118 aaPredicted RBP29.31■■■□□ 2.28
CDC42SE2-207ENST00000504701 MYD88Q99836 296 aa29.31■■■□□ 2.28
CDC42SE2-207ENST00000504701 HACL1Q9UJ83 578 aa29.31■■■□□ 2.28
CDC42SE2-207ENST00000504701 EPHX2P34913 555 aa29.3■■■□□ 2.28
CDC42SE2-207ENST00000504701 GOLGA2Q08379 1002 aa29.3■■■□□ 2.28
CDC42SE2-207ENST00000504701 GPC2Q8N158 579 aa29.3■■■□□ 2.28
CDC42SE2-207ENST00000504701 JARID2Q92833 1246 aaPredicted RBP29.3■■■□□ 2.28
CDC42SE2-207ENST00000504701 ANP32CO43423 234 aa29.29■■■□□ 2.28
CDC42SE2-207ENST00000504701 SP8Q8IXZ3 490 aa29.29■■■□□ 2.28
CDC42SE2-207ENST00000504701 CELF1Q92879 486 aaKnown RBP29.29■■■□□ 2.28
CDC42SE2-207ENST00000504701 SALL2Q9Y467 1007 aaPredicted RBP29.29■■■□□ 2.28
CDC42SE2-207ENST00000504701 BBOX1O75936 387 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 198.7 ms