RNA–Protein interactions for RNA: ENST00000504634.5

NEDD9-209, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-209ENST00000504634 ZBTB3Q9H5J0 574 aa16.01■□□□□ 0.15
NEDD9-209ENST00000504634 EIF4A1P60842 406 aaKnown RBP16■□□□□ 0.15
NEDD9-209ENST00000504634 TMX4Q9H1E5 349 aaPredicted RBP16■□□□□ 0.15
NEDD9-209ENST00000504634 TCERG1O14776 1098 aaKnown RBP15.99■□□□□ 0.15
NEDD9-209ENST00000504634 GRIPAP1Q4V328 841 aa15.99■□□□□ 0.15
NEDD9-209ENST00000504634 LARGE2Q8N3Y3 721 aa15.99■□□□□ 0.15
NEDD9-209ENST00000504634 RBM17Q96I25 401 aaKnown RBP15.99■□□□□ 0.15
NEDD9-209ENST00000504634 PRDM10Q9NQV6 1147 aa15.99■□□□□ 0.15
NEDD9-209ENST00000504634 ABT1Q9ULW3 272 aaKnown RBP15.99■□□□□ 0.15
NEDD9-209ENST00000504634 MAPK8IP3Q9UPT6 1336 aa15.98■□□□□ 0.15
NEDD9-209ENST00000504634 ARFGEF2Q9Y6D5 1785 aa15.98■□□□□ 0.15
NEDD9-209ENST00000504634 HOXA10P31260 410 aaPredicted RBP15.98■□□□□ 0.15
NEDD9-209ENST00000504634 CACNA1SQ13698 1873 aa15.98■□□□□ 0.15
NEDD9-209ENST00000504634 NFE2L2Q16236 605 aa15.98■□□□□ 0.15
NEDD9-209ENST00000504634 DEFB115Q30KQ5 88 aa15.98■□□□□ 0.15
NEDD9-209ENST00000504634 SUSD4Q5VX71 490 aa15.98■□□□□ 0.15
NEDD9-209ENST00000504634 THUMPD2Q9BTF0 503 aaKnown RBP15.98■□□□□ 0.15
NEDD9-209ENST00000504634 PNNQ9H307 717 aaKnown RBP15.98■□□□□ 0.15
NEDD9-209ENST00000504634 SCN4AP35499 1836 aa15.97■□□□□ 0.15
NEDD9-209ENST00000504634 RASSF10A6NK89 507 aa15.97■□□□□ 0.15
NEDD9-209ENST00000504634 PPEF1O14829 653 aaPredicted RBP15.97■□□□□ 0.15
NEDD9-209ENST00000504634 UBN2Q6ZU65 1347 aa15.96■□□□□ 0.15
NEDD9-209ENST00000504634 PAXIP1Q6ZW49 1069 aaPredicted RBP15.96■□□□□ 0.15
NEDD9-209ENST00000504634 PPP1R42Q7Z4L9 355 aa15.96■□□□□ 0.15
NEDD9-209ENST00000504634 NIM1KQ8IY84 436 aa15.96■□□□□ 0.15
NEDD9-209ENST00000504634 CRAMP1Q96RY5 1269 aa15.96■□□□□ 0.15
NEDD9-209ENST00000504634 WBP1LQ9NX94 342 aa15.96■□□□□ 0.15
NEDD9-209ENST00000504634 IBTKQ9P2D0 1353 aaPredicted RBP15.96■□□□□ 0.15
NEDD9-209ENST00000504634 PPIP5K2O43314 1243 aa15.95■□□□□ 0.14
NEDD9-209ENST00000504634 LBX1P52954 281 aa15.95■□□□□ 0.14
NEDD9-209ENST00000504634 PARP10Q53GL7 1025 aa15.95■□□□□ 0.14
NEDD9-209ENST00000504634 ZNF34Q8IZ26 560 aa15.95■□□□□ 0.14
NEDD9-209ENST00000504634 NLRP3Q96P20 1036 aa15.95■□□□□ 0.14
NEDD9-209ENST00000504634 PLEKHF1Q96S99 279 aa15.95■□□□□ 0.14
NEDD9-209ENST00000504634 DDX21Q9NR30 783 aaKnown RBP eCLIP15.95■□□□□ 0.14
NEDD9-209ENST00000504634 TSPYL4Q9UJ04 414 aa15.95■□□□□ 0.14
NEDD9-209ENST00000504634 ERBB4Q15303 1308 aa15.94■□□□□ 0.14
NEDD9-209ENST00000504634 WDR33Q9C0J8 1336 aaKnown RBP15.94■□□□□ 0.14
NEDD9-209ENST00000504634 NTSR2O95665 410 aa15.94■□□□□ 0.14
NEDD9-209ENST00000504634 EIF2S2P20042 333 aaKnown RBP15.94■□□□□ 0.14
NEDD9-209ENST00000504634 EPS15P42566 896 aa15.94■□□□□ 0.14
NEDD9-209ENST00000504634 SCNN1DP51172 638 aa15.94■□□□□ 0.14
NEDD9-209ENST00000504634 MAP2K1Q02750 393 aaPredicted RBP15.94■□□□□ 0.14
NEDD9-209ENST00000504634 GIGYF2Q6Y7W6 1299 aaKnown RBP15.94■□□□□ 0.14
NEDD9-209ENST00000504634 RIC1Q4ADV7 1423 aa15.94■□□□□ 0.14
NEDD9-209ENST00000504634 SNED1Q8TER0 1413 aa15.94■□□□□ 0.14
NEDD9-209ENST00000504634 GRM1Q13255 1194 aa15.93■□□□□ 0.14
NEDD9-209ENST00000504634 C3orf67Q6ZVT6 689 aa15.93■□□□□ 0.14
NEDD9-209ENST00000504634 USP50Q70EL3 339 aaPredicted RBP15.93■□□□□ 0.14
NEDD9-209ENST00000504634 UTP14AQ9BVJ6 771 aaKnown RBP15.93■□□□□ 0.14
NEDD9-209ENST00000504634 BEGAINQ9BUH8 593 aa15.92■□□□□ 0.14
NEDD9-209ENST00000504634 ATP6V0A2Q9Y487 856 aa15.92■□□□□ 0.14
NEDD9-209ENST00000504634 ECE1P42892 770 aa15.91■□□□□ 0.14
NEDD9-209ENST00000504634 AOC3Q16853 763 aa15.91■□□□□ 0.14
NEDD9-209ENST00000504634 SLC51AQ86UW1 340 aa15.91■□□□□ 0.14
NEDD9-209ENST00000504634 SUPT20HQ8NEM7 779 aa15.91■□□□□ 0.14
NEDD9-209ENST00000504634 LAMB4A4D0S4 1761 aa15.9■□□□□ 0.14
NEDD9-209ENST00000504634 HSPA8P11142 646 aaKnown RBP15.9■□□□□ 0.14
NEDD9-209ENST00000504634 RIPK4P57078 832 aa15.9■□□□□ 0.14
NEDD9-209ENST00000504634 FMR1Q06787 632 aaKnown RBP eCLIP15.9■□□□□ 0.14
NEDD9-209ENST00000504634 CAPNS2Q96L46 248 aa15.9■□□□□ 0.14
NEDD9-209ENST00000504634 VPS33BQ9H267 617 aa15.9■□□□□ 0.14
NEDD9-209ENST00000504634 COL4A5P29400 1685 aa15.89■□□□□ 0.13
NEDD9-209ENST00000504634 TRAF5O00463 557 aa15.89■□□□□ 0.13
NEDD9-209ENST00000504634 ANXA1P04083 346 aa15.89■□□□□ 0.13
NEDD9-209ENST00000504634 HSP90AB3PQ58FF7 597 aa15.89■□□□□ 0.13
NEDD9-209ENST00000504634 SLC10A5Q5PT55 438 aa15.89■□□□□ 0.13
NEDD9-209ENST00000504634 DPP8Q6V1X1 898 aaPredicted RBP15.89■□□□□ 0.13
NEDD9-209ENST00000504634 GPR101Q96P66 508 aaPredicted RBP15.89■□□□□ 0.13
NEDD9-209ENST00000504634 ADARB2Q9NS39 739 aaKnown RBP15.89■□□□□ 0.13
NEDD9-209ENST00000504634 ZNRF3Q9ULT6 936 aa15.89■□□□□ 0.13
NEDD9-209ENST00000504634 ADAMTSL1Q8N6G6 1762 aa15.89■□□□□ 0.13
NEDD9-209ENST00000504634 ABCC4O15439 1325 aa15.89■□□□□ 0.13
NEDD9-209ENST00000504634 BBOX1O75936 387 aa15.88■□□□□ 0.13
NEDD9-209ENST00000504634 AIMP1Q12904 312 aaKnown RBP15.88■□□□□ 0.13
NEDD9-209ENST00000504634 PDIA6Q15084 440 aa15.88■□□□□ 0.13
NEDD9-209ENST00000504634 PROSER3Q2NL68 480 aa15.88■□□□□ 0.13
NEDD9-209ENST00000504634 CYP4F22Q6NT55 531 aa15.88■□□□□ 0.13
NEDD9-209ENST00000504634 NECTIN2Q92692 538 aa15.88■□□□□ 0.13
NEDD9-209ENST00000504634 GPRC5DQ9NZD1 345 aa15.88■□□□□ 0.13
NEDD9-209ENST00000504634 HCLS1P14317 486 aaPredicted RBP15.87■□□□□ 0.13
NEDD9-209ENST00000504634 CXCL9Q07325 125 aa15.87■□□□□ 0.13
NEDD9-209ENST00000504634 LMOD3Q0VAK6 560 aa15.87■□□□□ 0.13
NEDD9-209ENST00000504634 DDX46Q7L014 1031 aaKnown RBP15.87■□□□□ 0.13
NEDD9-209ENST00000504634 COPS6Q7L5N1 327 aa15.87■□□□□ 0.13
NEDD9-209ENST00000504634 SP8Q8IXZ3 490 aa15.87■□□□□ 0.13
NEDD9-209ENST00000504634 MPNDQ8N594 471 aa15.87■□□□□ 0.13
NEDD9-209ENST00000504634 BCL2L13Q9BXK5 485 aa15.87■□□□□ 0.13
NEDD9-209ENST00000504634 BABAM1Q9NWV8 329 aa15.87■□□□□ 0.13
NEDD9-209ENST00000504634 KDM3BQ7LBC6 1761 aa15.87■□□□□ 0.13
NEDD9-209ENST00000504634 GMPSP49915 693 aaPredicted RBP15.86■□□□□ 0.13
NEDD9-209ENST00000504634 CST9Q5W186 159 aa15.86■□□□□ 0.13
NEDD9-209ENST00000504634 CIAPIN1Q6FI81 312 aa15.86■□□□□ 0.13
NEDD9-209ENST00000504634 LRP10Q7Z4F1 713 aa15.86■□□□□ 0.13
NEDD9-209ENST00000504634 NLRP10Q86W26 655 aa15.86■□□□□ 0.13
NEDD9-209ENST00000504634 XAGE3Q8WTP9 111 aa15.86■□□□□ 0.13
NEDD9-209ENST00000504634 RTFDC1Q9BY42 306 aaPredicted RBP15.86■□□□□ 0.13
NEDD9-209ENST00000504634 PCDH10Q9P2E7 1040 aa15.86■□□□□ 0.13
NEDD9-209ENST00000504634 TRMT112Q9UI30 125 aaKnown RBP15.86■□□□□ 0.13
NEDD9-209ENST00000504634 TLL2Q9Y6L7 1015 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms