RNA–Protein interactions for RNA: ENST00000504466.1

HMGCR-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 1,107 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-204ENST00000504466 KCNQ4P56696 695 aa8.32□□□□□ -1.08
HMGCR-204ENST00000504466 STAG2Q8N3U4 1231 aa8.32□□□□□ -1.08
HMGCR-204ENST00000504466 TNFRSF25Q93038 417 aa8.32□□□□□ -1.08
HMGCR-204ENST00000504466 MKRN1Q9UHC7 482 aaKnown RBP8.32□□□□□ -1.08
HMGCR-204ENST00000504466 CHRNA4P43681 627 aa8.31□□□□□ -1.08
HMGCR-204ENST00000504466 SFSWAPQ12872 951 aaKnown RBP8.31□□□□□ -1.08
HMGCR-204ENST00000504466 PRDM6Q9NQX0 595 aa8.31□□□□□ -1.08
HMGCR-204ENST00000504466 DNMBPQ6XZF7 1577 aa8.31□□□□□ -1.08
HMGCR-204ENST00000504466 TOPBP1Q92547 1522 aa8.3□□□□□ -1.08
HMGCR-204ENST00000504466 C21orf2O43822 256 aa8.3□□□□□ -1.08
HMGCR-204ENST00000504466 ALAS2P22557 587 aa8.3□□□□□ -1.08
HMGCR-204ENST00000504466 RHPN1Q8TCX5 695 aa8.3□□□□□ -1.08
HMGCR-204ENST00000504466 SLC30A3Q99726 388 aa8.3□□□□□ -1.08
HMGCR-204ENST00000504466 NEUROD4Q9HD90 331 aa8.3□□□□□ -1.08
HMGCR-204ENST00000504466 ANKIB1Q9P2G1 1089 aa8.3□□□□□ -1.08
HMGCR-204ENST00000504466 FGD5Q6ZNL6 1462 aa8.3□□□□□ -1.08
HMGCR-204ENST00000504466 KIF21AQ7Z4S6 1674 aa8.3□□□□□ -1.08
HMGCR-204ENST00000504466 PDS5BQ9NTI5 1447 aa8.29□□□□□ -1.08
HMGCR-204ENST00000504466 URB2Q14146 1524 aaKnown RBP8.29□□□□□ -1.08
HMGCR-204ENST00000504466 KIF21BO75037 1637 aa8.29□□□□□ -1.08
HMGCR-204ENST00000504466 COL9A3Q14050 684 aaPredicted RBP8.29□□□□□ -1.08
HMGCR-204ENST00000504466 PLVAPQ9BX97 442 aa8.29□□□□□ -1.08
HMGCR-204ENST00000504466 CEP164Q9UPV0 1460 aa8.29□□□□□ -1.08
HMGCR-204ENST00000504466 PPP1R15AO75807 674 aaPredicted RBP8.28□□□□□ -1.08
HMGCR-204ENST00000504466 FURINP09958 794 aa8.28□□□□□ -1.08
HMGCR-204ENST00000504466 SPATA31C1P0DKV0 1188 aa8.28□□□□□ -1.08
HMGCR-204ENST00000504466 PDIA4P13667 645 aaKnown RBP8.28□□□□□ -1.08
HMGCR-204ENST00000504466 PHACTR1Q9C0D0 580 aa8.28□□□□□ -1.08
HMGCR-204ENST00000504466 CHMP3Q9Y3E7 222 aa8.28□□□□□ -1.08
HMGCR-204ENST00000504466 STARD13Q9Y3M8 1113 aa8.28□□□□□ -1.08
HMGCR-204ENST00000504466 TNIKQ9UKE5 1360 aa8.27□□□□□ -1.09
HMGCR-204ENST00000504466 TYRO3Q06418 890 aa8.27□□□□□ -1.09
HMGCR-204ENST00000504466 SPEM2Q0P670 501 aa8.27□□□□□ -1.09
HMGCR-204ENST00000504466 TSEN2Q8NCE0 465 aaKnown RBP8.27□□□□□ -1.09
HMGCR-204ENST00000504466 GAS2L2Q8NHY3 880 aa8.27□□□□□ -1.09
HMGCR-204ENST00000504466 SUSD3Q96L08 255 aa8.27□□□□□ -1.09
HMGCR-204ENST00000504466 C2orf49Q9BVC5 232 aaPredicted RBP8.27□□□□□ -1.09
HMGCR-204ENST00000504466 HCN4Q9Y3Q4 1203 aa8.27□□□□□ -1.09
HMGCR-204ENST00000504466 POLA1P09884 1462 aaPredicted RBP8.26□□□□□ -1.09
HMGCR-204ENST00000504466 GOLGA3Q08378 1498 aa8.26□□□□□ -1.09
HMGCR-204ENST00000504466 PRXQ9BXM0 1461 aa8.26□□□□□ -1.09
HMGCR-204ENST00000504466 SFI1A8K8P3 1242 aa8.26□□□□□ -1.09
HMGCR-204ENST00000504466 HSH2DQ96JZ2 352 aa8.26□□□□□ -1.09
HMGCR-204ENST00000504466 PPP1R12CQ9BZL4 782 aa8.26□□□□□ -1.09
HMGCR-204ENST00000504466 BRD7Q9NPI1 651 aa8.26□□□□□ -1.09
HMGCR-204ENST00000504466 MAFBQ9Y5Q3 323 aaPredicted RBP8.26□□□□□ -1.09
HMGCR-204ENST00000504466 KIF27Q86VH2 1401 aa8.26□□□□□ -1.09
HMGCR-204ENST00000504466 XP32Q5T750 250 aa8.25□□□□□ -1.09
HMGCR-204ENST00000504466 ZNF280CQ8ND82 737 aa8.25□□□□□ -1.09
HMGCR-204ENST00000504466 CEP63Q96MT8 703 aa8.25□□□□□ -1.09
HMGCR-204ENST00000504466 TFIP11Q9UBB9 837 aaKnown RBP8.25□□□□□ -1.09
HMGCR-204ENST00000504466 KCNH4Q9UQ05 1017 aa8.25□□□□□ -1.09
HMGCR-204ENST00000504466 ACIN1Q9UKV3 1341 aaKnown RBP8.25□□□□□ -1.09
HMGCR-204ENST00000504466 RAD54L2Q9Y4B4 1467 aa8.25□□□□□ -1.09
HMGCR-204ENST00000504466 RAPGEF2Q9Y4G8 1499 aa8.25□□□□□ -1.09
HMGCR-204ENST00000504466 ATAD2Q6PL18 1390 aa8.24□□□□□ -1.09
HMGCR-204ENST00000504466 SPDYE3A6NKU9 549 aa8.24□□□□□ -1.09
HMGCR-204ENST00000504466 PPP1R12BO60237 982 aaPredicted RBP8.24□□□□□ -1.09
HMGCR-204ENST00000504466 NEUROD1Q13562 356 aa8.24□□□□□ -1.09
HMGCR-204ENST00000504466 CFAP70Q5T0N1 1121 aa8.24□□□□□ -1.09
HMGCR-204ENST00000504466 C20orf204Q6ZNR8 217 aa8.24□□□□□ -1.09
HMGCR-204ENST00000504466 ALDH16A1Q8IZ83 802 aa8.24□□□□□ -1.09
HMGCR-204ENST00000504466 MICALL1Q8N3F8 863 aa8.24□□□□□ -1.09
HMGCR-204ENST00000504466 PBXIP1Q96AQ6 731 aa8.24□□□□□ -1.09
HMGCR-204ENST00000504466 ZNF594Q96JF6 807 aaPredicted RBP8.24□□□□□ -1.09
HMGCR-204ENST00000504466 EFCC1Q9HA90 598 aa8.24□□□□□ -1.09
HMGCR-204ENST00000504466 CUX2O14529 1486 aa8.24□□□□□ -1.09
HMGCR-204ENST00000504466 ABCA10Q8WWZ4 1543 aa8.24□□□□□ -1.09
HMGCR-204ENST00000504466 WDR97A6NE52 1622 aa8.23□□□□□ -1.09
HMGCR-204ENST00000504466 M0R082 166 aa8.23□□□□□ -1.09
HMGCR-204ENST00000504466 RASA1P20936 1047 aa8.23□□□□□ -1.09
HMGCR-204ENST00000504466 RFX1P22670 979 aa8.23□□□□□ -1.09
HMGCR-204ENST00000504466 SEC13P55735 322 aa8.23□□□□□ -1.09
HMGCR-204ENST00000504466 HIF1AQ16665 826 aa8.23□□□□□ -1.09
HMGCR-204ENST00000504466 ZNF417Q8TAU3 575 aa8.23□□□□□ -1.09
HMGCR-204ENST00000504466 ZNF587Q96SQ5 575 aaPredicted RBP8.23□□□□□ -1.09
HMGCR-204ENST00000504466 ALBP02768 609 aa8.22□□□□□ -1.09
HMGCR-204ENST00000504466 NID1P14543 1247 aa8.22□□□□□ -1.09
HMGCR-204ENST00000504466 ITGB7P26010 798 aa8.22□□□□□ -1.09
HMGCR-204ENST00000504466 ADH7P40394 386 aa8.22□□□□□ -1.09
HMGCR-204ENST00000504466 KANK4Q5T7N3 995 aaPredicted RBP8.22□□□□□ -1.09
HMGCR-204ENST00000504466 IER5Q5VY09 327 aa8.22□□□□□ -1.09
HMGCR-204ENST00000504466 BTLAQ7Z6A9 289 aa8.22□□□□□ -1.09
HMGCR-204ENST00000504466 RBM19Q9Y4C8 960 aaKnown RBP8.22□□□□□ -1.09
HMGCR-204ENST00000504466 ERICH3Q5RHP9 1530 aa8.22□□□□□ -1.09
HMGCR-204ENST00000504466 CEP162Q5TB80 1403 aa8.21□□□□□ -1.09
HMGCR-204ENST00000504466 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.21□□□□□ -1.1
HMGCR-204ENST00000504466 LMOD1P29536 600 aaPredicted RBP8.21□□□□□ -1.1
HMGCR-204ENST00000504466 PTK7Q13308 1070 aa8.21□□□□□ -1.1
HMGCR-204ENST00000504466 RETREG2Q8NC44 543 aa8.21□□□□□ -1.1
HMGCR-204ENST00000504466 MRC2Q9UBG0 1479 aa8.2□□□□□ -1.1
HMGCR-204ENST00000504466 GATA4P43694 442 aa8.2□□□□□ -1.1
HMGCR-204ENST00000504466 PRRT3Q5FWE3 981 aa8.2□□□□□ -1.1
HMGCR-204ENST00000504466 SCG3Q8WXD2 468 aaKnown RBP8.2□□□□□ -1.1
HMGCR-204ENST00000504466 TRAIPQ9BWF2 469 aa8.2□□□□□ -1.1
HMGCR-204ENST00000504466 DMGDHQ9UI17 866 aaKnown RBP8.2□□□□□ -1.1
HMGCR-204ENST00000504466 TARBP1Q13395 1621 aaKnown RBP8.19□□□□□ -1.1
HMGCR-204ENST00000504466 PDE4CQ08493 712 aa8.19□□□□□ -1.1
HMGCR-204ENST00000504466 RTN1Q16799 776 aa8.19□□□□□ -1.1
HMGCR-204ENST00000504466 CRTC2Q53ET0 693 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms