RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 VAMP4O75379 141 aa9.95□□□□□ -0.82
SKP2-203ENST00000504386 ATXN8OSP0DMR3 200 aa9.95□□□□□ -0.82
SKP2-203ENST00000504386 SRGNP10124 158 aa9.95□□□□□ -0.82
SKP2-203ENST00000504386 YBX3P16989 372 aaKnown RBP eCLIP9.95□□□□□ -0.822e-7■■□□□ 12.2
SKP2-203ENST00000504386 CC2D2BQ6DHV5 1058 aa9.95□□□□□ -0.82
SKP2-203ENST00000504386 KSR2Q6VAB6 950 aa9.95□□□□□ -0.82
SKP2-203ENST00000504386 TSPYL6Q8N831 410 aa9.95□□□□□ -0.82
SKP2-203ENST00000504386 CCDC191Q8NCU4 936 aa9.95□□□□□ -0.82
SKP2-203ENST00000504386 RPGRQ92834 1020 aaKnown RBP9.95□□□□□ -0.82
SKP2-203ENST00000504386 RBM17Q96I25 401 aaKnown RBP9.95□□□□□ -0.82
SKP2-203ENST00000504386 TRMT112Q9UI30 125 aaKnown RBP9.95□□□□□ -0.82
SKP2-203ENST00000504386 FAM177BA6PVY3 158 aa9.94□□□□□ -0.82
SKP2-203ENST00000504386 NTSR2O95665 410 aa9.94□□□□□ -0.82
SKP2-203ENST00000504386 CHRNA5P30532 468 aa9.94□□□□□ -0.82
SKP2-203ENST00000504386 SLFN5Q08AF3 891 aa9.94□□□□□ -0.82
SKP2-203ENST00000504386 FLIIQ13045 1269 aa9.94□□□□□ -0.82
SKP2-203ENST00000504386 FKBP5Q13451 457 aaPredicted RBP9.94□□□□□ -0.82
SKP2-203ENST00000504386 SLC10A5Q5PT55 438 aa9.94□□□□□ -0.82
SKP2-203ENST00000504386 SUSD4Q5VX71 490 aa9.94□□□□□ -0.82
SKP2-203ENST00000504386 ARHGAP27Q6ZUM4 889 aa9.94□□□□□ -0.82
SKP2-203ENST00000504386 TMC4Q7Z404 712 aa9.94□□□□□ -0.82
SKP2-203ENST00000504386 NLRP10Q86W26 655 aa9.94□□□□□ -0.82
SKP2-203ENST00000504386 METTL22Q9BUU2 404 aaPredicted RBP9.94□□□□□ -0.82
SKP2-203ENST00000504386 UBN2Q6ZU65 1347 aa9.93□□□□□ -0.82
SKP2-203ENST00000504386 ZC3H4Q9UPT8 1303 aaKnown RBP9.93□□□□□ -0.82
SKP2-203ENST00000504386 KCNA3P22001 575 aa9.93□□□□□ -0.82
SKP2-203ENST00000504386 ALDH1L2Q3SY69 923 aa9.93□□□□□ -0.82
SKP2-203ENST00000504386 CRY2Q49AN0 593 aa9.93□□□□□ -0.82
SKP2-203ENST00000504386 RTKN2Q8IZC4 609 aa9.93□□□□□ -0.82
SKP2-203ENST00000504386 ISCA1Q9BUE6 129 aa9.93□□□□□ -0.82
SKP2-203ENST00000504386 PHAXQ9H814 394 aaKnown RBP9.93□□□□□ -0.82
SKP2-203ENST00000504386 CWC25Q9NXE8 425 aaPredicted RBP9.93□□□□□ -0.82
SKP2-203ENST00000504386 AFDNP55196 1824 aaKnown RBP9.93□□□□□ -0.82
SKP2-203ENST00000504386 NUP98P52948 1817 aa9.92□□□□□ -0.82
SKP2-203ENST00000504386 SENP3-EIF4A1A0A087X0R7 540 aa9.92□□□□□ -0.82
SKP2-203ENST00000504386 PI4KAP2A4QPH2 592 aa9.92□□□□□ -0.82
SKP2-203ENST00000504386 HOXA10P31260 410 aaPredicted RBP9.92□□□□□ -0.82
SKP2-203ENST00000504386 HNRNPUQ00839 825 aaKnown RBP eCLIP9.92□□□□□ -0.82
SKP2-203ENST00000504386 ERFEQ4G0M1 354 aa9.92□□□□□ -0.82
SKP2-203ENST00000504386 CCDC93Q567U6 631 aa9.92□□□□□ -0.82
SKP2-203ENST00000504386 DDX46Q7L014 1031 aaKnown RBP9.92□□□□□ -0.82
SKP2-203ENST00000504386 NUTM1Q86Y26 1132 aa9.92□□□□□ -0.82
SKP2-203ENST00000504386 PI4KAP1Q8N8J0 262 aa9.92□□□□□ -0.82
SKP2-203ENST00000504386 ZBTB38Q8NAP3 1195 aaPredicted RBP9.92□□□□□ -0.82
SKP2-203ENST00000504386 DNAAF4Q8WXU2 420 aa9.92□□□□□ -0.82
SKP2-203ENST00000504386 CRAMP1Q96RY5 1269 aa9.92□□□□□ -0.82
SKP2-203ENST00000504386 MAP3K2Q9Y2U5 619 aa9.92□□□□□ -0.82
SKP2-203ENST00000504386 CACNA1FO60840 1977 aa9.92□□□□□ -0.82
SKP2-203ENST00000504386 PTPRCP08575 1304 aa9.91□□□□□ -0.82
SKP2-203ENST00000504386 PCCAP05165 728 aaPredicted RBP9.91□□□□□ -0.82
SKP2-203ENST00000504386 PRPF40BQ6NWY9 871 aaKnown RBP9.91□□□□□ -0.82
SKP2-203ENST00000504386 LINS1Q8NG48 757 aa9.91□□□□□ -0.82
SKP2-203ENST00000504386 MYD88Q99836 296 aa9.91□□□□□ -0.82
SKP2-203ENST00000504386 DLEC1Q9Y238 1755 aa9.91□□□□□ -0.82
SKP2-203ENST00000504386 CDHR2Q9BYE9 1310 aa9.9□□□□□ -0.82
SKP2-203ENST00000504386 LTBP3Q9NS15 1303 aa9.9□□□□□ -0.82
SKP2-203ENST00000504386 ATP5J2-PTCD1G3V325 749 aa9.9□□□□□ -0.82
SKP2-203ENST00000504386 IRS4O14654 1257 aaPredicted RBP9.9□□□□□ -0.82
SKP2-203ENST00000504386 BBOX1O75936 387 aa9.9□□□□□ -0.82
SKP2-203ENST00000504386 LMNB1P20700 586 aa9.9□□□□□ -0.82
SKP2-203ENST00000504386 TAOK3Q9H2K8 898 aa9.9□□□□□ -0.82
SKP2-203ENST00000504386 SPINK5Q9NQ38 1064 aaPredicted RBP9.9□□□□□ -0.82
SKP2-203ENST00000504386 HDAC5Q9UQL6 1122 aa9.9□□□□□ -0.82
SKP2-203ENST00000504386 N4BP2Q86UW6 1770 aaPredicted RBP9.9□□□□□ -0.82
SKP2-203ENST00000504386 KIAA1551Q9HCM1 1747 aa9.9□□□□□ -0.83
SKP2-203ENST00000504386 CHD4Q14839 1912 aa9.9□□□□□ -0.83
SKP2-203ENST00000504386 ABCC12Q96J65 1359 aa9.89□□□□□ -0.83
SKP2-203ENST00000504386 ARFGEF1Q9Y6D6 1849 aa9.89□□□□□ -0.83
SKP2-203ENST00000504386 ZBED9Q6R2W3 1325 aa9.89□□□□□ -0.83
SKP2-203ENST00000504386 ANKRD36CQ5JPF3 1778 aa9.89□□□□□ -0.83
SKP2-203ENST00000504386 C21orf2O43822 256 aa9.89□□□□□ -0.83
SKP2-203ENST00000504386 PDE8AO60658 829 aa9.89□□□□□ -0.83
SKP2-203ENST00000504386 ALDH1L1O75891 902 aa9.89□□□□□ -0.83
SKP2-203ENST00000504386 CCDC152Q4G0S7 254 aa9.89□□□□□ -0.83
SKP2-203ENST00000504386 TRMT2AQ8IZ69 625 aaKnown RBP9.89□□□□□ -0.83
SKP2-203ENST00000504386 CCDC24Q8N4L8 307 aa9.89□□□□□ -0.83
SKP2-203ENST00000504386 SUPT20HQ8NEM7 779 aa9.89□□□□□ -0.83
SKP2-203ENST00000504386 WWC3Q9ULE0 1092 aa9.89□□□□□ -0.83
SKP2-203ENST00000504386 ADCY9O60503 1353 aa9.88□□□□□ -0.83
SKP2-203ENST00000504386 KIF16BQ96L93 1317 aa9.88□□□□□ -0.83
SKP2-203ENST00000504386 BRCA1P38398 1863 aaKnown RBP9.88□□□□□ -0.83
SKP2-203ENST00000504386 NEURL1BA8MQ27 555 aa9.88□□□□□ -0.83
SKP2-203ENST00000504386 TCERG1O14776 1098 aaKnown RBP9.88□□□□□ -0.83
SKP2-203ENST00000504386 IPO8O15397 1037 aaKnown RBP9.88□□□□□ -0.83
SKP2-203ENST00000504386 BRPF1P55201 1214 aaPredicted RBP9.88□□□□□ -0.83
SKP2-203ENST00000504386 GRAPQ13588 217 aa9.88□□□□□ -0.83
SKP2-203ENST00000504386 SF3B3Q15393 1217 aaKnown RBP9.88□□□□□ -0.83
SKP2-203ENST00000504386 GRAPLQ8TC17 118 aaPredicted RBP9.88□□□□□ -0.83
SKP2-203ENST00000504386 FAM89AQ96GI7 184 aa9.88□□□□□ -0.83
SKP2-203ENST00000504386 VPS33BQ9H267 617 aa9.88□□□□□ -0.83
SKP2-203ENST00000504386 SMC4Q9NTJ3 1288 aa9.88□□□□□ -0.83
SKP2-203ENST00000504386 KDM2BQ8NHM5 1336 aa9.87□□□□□ -0.83
SKP2-203ENST00000504386 PPEF1O14829 653 aaPredicted RBP9.87□□□□□ -0.83
SKP2-203ENST00000504386 HCLS1P14317 486 aaPredicted RBP9.87□□□□□ -0.83
SKP2-203ENST00000504386 DSG3P32926 999 aa9.87□□□□□ -0.83
SKP2-203ENST00000504386 FKBP4Q02790 459 aaKnown RBP eCLIP9.87□□□□□ -0.83
SKP2-203ENST00000504386 DPY19L2Q6NUT2 758 aa9.87□□□□□ -0.83
SKP2-203ENST00000504386 CDC5LQ99459 802 aaKnown RBP9.87□□□□□ -0.83
SKP2-203ENST00000504386 PSMD1Q99460 953 aa9.87□□□□□ -0.83
SKP2-203ENST00000504386 API5Q9BZZ5 524 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms