RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 SUSD4Q5VX71 490 aa15.57■□□□□ 0.08
MED28-203ENST00000503945 COPS6Q7L5N1 327 aa15.57■□□□□ 0.08
MED28-203ENST00000503945 RTKN2Q8IZC4 609 aa15.57■□□□□ 0.08
MED28-203ENST00000503945 L3MBTL3Q96JM7 780 aaPredicted RBP15.57■□□□□ 0.08
MED28-203ENST00000503945 CFAP44Q96MT7 982 aa15.57■□□□□ 0.08
MED28-203ENST00000503945 TAF1DQ9H5J8 278 aaPredicted RBP15.57■□□□□ 0.08
MED28-203ENST00000503945 IQCA1LA6NCM1 817 aa15.56■□□□□ 0.08
MED28-203ENST00000503945 APAF1O14727 1248 aa15.56■□□□□ 0.08
MED28-203ENST00000503945 CALD1Q05682 793 aaKnown RBP15.56■□□□□ 0.08
MED28-203ENST00000503945 PARP10Q53GL7 1025 aa15.56■□□□□ 0.08
MED28-203ENST00000503945 LDHDQ86WU2 507 aa15.56■□□□□ 0.08
MED28-203ENST00000503945 RPGRQ92834 1020 aaKnown RBP15.56■□□□□ 0.08
MED28-203ENST00000503945 ZNF541Q9H0D2 1346 aa15.56■□□□□ 0.08
MED28-203ENST00000503945 NUP98P52948 1817 aa15.55■□□□□ 0.08
MED28-203ENST00000503945 PASKQ96RG2 1323 aa15.55■□□□□ 0.08
MED28-203ENST00000503945 ITGBL1O95965 494 aaPredicted RBP15.55■□□□□ 0.08
MED28-203ENST00000503945 ANXA1P04083 346 aa15.55■□□□□ 0.08
MED28-203ENST00000503945 HSP90AB3PQ58FF7 597 aa15.55■□□□□ 0.08
MED28-203ENST00000503945 SYNE4Q8N205 404 aa15.55■□□□□ 0.08
MED28-203ENST00000503945 NLRP3Q96P20 1036 aa15.55■□□□□ 0.08
MED28-203ENST00000503945 UTP14AQ9BVJ6 771 aaKnown RBP15.55■□□□□ 0.08
MED28-203ENST00000503945 DDX21Q9NR30 783 aaKnown RBP eCLIP15.55■□□□□ 0.08
MED28-203ENST00000503945 DLG5Q8TDM6 1919 aa15.55■□□□□ 0.08
MED28-203ENST00000503945 PROSER3Q2NL68 480 aa15.54■□□□□ 0.08
MED28-203ENST00000503945 EAPPQ56P03 285 aaPredicted RBP15.54■□□□□ 0.08
MED28-203ENST00000503945 LRP10Q7Z4F1 713 aa15.54■□□□□ 0.08
MED28-203ENST00000503945 XAGE3Q8WTP9 111 aa15.54■□□□□ 0.08
MED28-203ENST00000503945 RBM17Q96I25 401 aaKnown RBP15.54■□□□□ 0.08
MED28-203ENST00000503945 FZD9O00144 591 aa15.53■□□□□ 0.08
MED28-203ENST00000503945 HOXB7P09629 217 aa15.53■□□□□ 0.08
MED28-203ENST00000503945 KRT24Q2M2I5 525 aa15.53■□□□□ 0.08
MED28-203ENST00000503945 CRY2Q49AN0 593 aa15.53■□□□□ 0.08
MED28-203ENST00000503945 SLC10A5Q5PT55 438 aa15.53■□□□□ 0.08
MED28-203ENST00000503945 HDGFL1Q5TGJ6 251 aa15.53■□□□□ 0.08
MED28-203ENST00000503945 CC2D2BQ6DHV5 1058 aa15.53■□□□□ 0.08
MED28-203ENST00000503945 TMX4Q9H1E5 349 aaPredicted RBP15.53■□□□□ 0.08
MED28-203ENST00000503945 DBF4Q9UBU7 674 aaPredicted RBP15.53■□□□□ 0.08
MED28-203ENST00000503945 HACL1Q9UJ83 578 aa15.53■□□□□ 0.08
MED28-203ENST00000503945 CLEC11AQ9Y240 323 aa15.53■□□□□ 0.08
MED28-203ENST00000503945 CNTNAP1P78357 1384 aa15.52■□□□□ 0.08
MED28-203ENST00000503945 HOXA10P31260 410 aaPredicted RBP15.52■□□□□ 0.08
MED28-203ENST00000503945 IARSP41252 1262 aaKnown RBP15.52■□□□□ 0.08
MED28-203ENST00000503945 GNAI1P63096 354 aa15.52■□□□□ 0.08
MED28-203ENST00000503945 TCIRG1Q13488 830 aa15.52■□□□□ 0.08
MED28-203ENST00000503945 GRIPAP1Q4V328 841 aa15.52■□□□□ 0.08
MED28-203ENST00000503945 DUSP27Q5VZP5 1158 aa15.52■□□□□ 0.08
MED28-203ENST00000503945 ANKRD13DQ6ZTN6 518 aa15.52■□□□□ 0.08
MED28-203ENST00000503945 UBN2Q6ZU65 1347 aa15.51■□□□□ 0.07
MED28-203ENST00000503945 ZNF316A6NFI3 1004 aaPredicted RBP15.51■□□□□ 0.07
MED28-203ENST00000503945 TMEM88BA6NKF7 163 aa15.51■□□□□ 0.07
MED28-203ENST00000503945 FOXN1O15353 648 aa15.51■□□□□ 0.07
MED28-203ENST00000503945 EPHX2P34913 555 aa15.51■□□□□ 0.07
MED28-203ENST00000503945 VEGFBP49765 207 aa15.51■□□□□ 0.07
MED28-203ENST00000503945 CRAMP1Q96RY5 1269 aa15.51■□□□□ 0.07
MED28-203ENST00000503945 CHMP4AQ9BY43 222 aa15.51■□□□□ 0.07
MED28-203ENST00000503945 MBIPQ9NS73 344 aa15.51■□□□□ 0.07
MED28-203ENST00000503945 HYPKQ9NX55 129 aa15.51■□□□□ 0.07
MED28-203ENST00000503945 CHPF2Q9P2E5 772 aa15.51■□□□□ 0.07
MED28-203ENST00000503945 NTSR2O95665 410 aa15.5■□□□□ 0.07
MED28-203ENST00000503945 ZNF853P0CG23 659 aa15.5■□□□□ 0.07
MED28-203ENST00000503945 IFT57Q9NWB7 429 aa15.5■□□□□ 0.07
MED28-203ENST00000503945 TRMT112Q9UI30 125 aaKnown RBP15.5■□□□□ 0.07
MED28-203ENST00000503945 LAMB4A4D0S4 1761 aa15.49■□□□□ 0.07
MED28-203ENST00000503945 ADAMTSL1Q8N6G6 1762 aa15.49■□□□□ 0.07
MED28-203ENST00000503945 RNF123Q5XPI4 1314 aa15.49■□□□□ 0.07
MED28-203ENST00000503945 ELL2O00472 640 aaPredicted RBP15.49■□□□□ 0.07
MED28-203ENST00000503945 ANP32CO43423 234 aa15.49■□□□□ 0.07
MED28-203ENST00000503945 MAP1SQ66K74 1059 aaPredicted RBP15.49■□□□□ 0.07
MED28-203ENST00000503945 PNMA8AQ86V59 439 aaPredicted RBP15.49■□□□□ 0.07
MED28-203ENST00000503945 NLRP10Q86W26 655 aa15.49■□□□□ 0.07
MED28-203ENST00000503945 CNTROBQ8N137 903 aa15.49■□□□□ 0.07
MED28-203ENST00000503945 PLBD2Q8NHP8 589 aa15.49■□□□□ 0.07
MED28-203ENST00000503945 PSMD1Q99460 953 aa15.49■□□□□ 0.07
MED28-203ENST00000503945 ABCC12Q96J65 1359 aa15.49■□□□□ 0.07
MED28-203ENST00000503945 TCERG1O14776 1098 aaKnown RBP15.48■□□□□ 0.07
MED28-203ENST00000503945 BBOX1O75936 387 aa15.48■□□□□ 0.07
MED28-203ENST00000503945 GPC2Q8N158 579 aa15.48■□□□□ 0.07
MED28-203ENST00000503945 JDP2Q8WYK2 163 aa15.48■□□□□ 0.07
MED28-203ENST00000503945 KDM3BQ7LBC6 1761 aa15.48■□□□□ 0.07
MED28-203ENST00000503945 SNED1Q8TER0 1413 aa15.48■□□□□ 0.07
MED28-203ENST00000503945 IBTKQ9P2D0 1353 aaPredicted RBP15.48■□□□□ 0.07
MED28-203ENST00000503945 SLC51AQ86UW1 340 aa15.47■□□□□ 0.07
MED28-203ENST00000503945 GJA3Q9Y6H8 435 aa15.47■□□□□ 0.07
MED28-203ENST00000503945 SH3TC1Q8TE82 1336 aa15.46■□□□□ 0.07
MED28-203ENST00000503945 HCLS1P14317 486 aaPredicted RBP15.46■□□□□ 0.07
MED28-203ENST00000503945 DEFB115Q30KQ5 88 aa15.46■□□□□ 0.07
MED28-203ENST00000503945 CCDC184Q52MB2 194 aa15.46■□□□□ 0.07
MED28-203ENST00000503945 RIC3Q7Z5B4 369 aa15.46■□□□□ 0.07
MED28-203ENST00000503945 PRDM10Q9NQV6 1147 aa15.46■□□□□ 0.07
MED28-203ENST00000503945 COL4A5P29400 1685 aa15.46■□□□□ 0.07
MED28-203ENST00000503945 PPEF1O14829 653 aaPredicted RBP15.45■□□□□ 0.06
MED28-203ENST00000503945 CTCFP49711 727 aaPredicted RBP15.45■□□□□ 0.06
MED28-203ENST00000503945 EIF6P56537 245 aaKnown RBP15.45■□□□□ 0.06
MED28-203ENST00000503945 C3orf67Q6ZVT6 689 aa15.45■□□□□ 0.06
MED28-203ENST00000503945 DDX46Q7L014 1031 aaKnown RBP15.45■□□□□ 0.06
MED28-203ENST00000503945 MRS2Q9HD23 443 aa15.45■□□□□ 0.06
MED28-203ENST00000503945 WBP1LQ9NX94 342 aa15.45■□□□□ 0.06
MED28-203ENST00000503945 LTBP1Q14766 1721 aa15.44■□□□□ 0.06
MED28-203ENST00000503945 ATP5J2-PTCD1G3V325 749 aa15.44■□□□□ 0.06
MED28-203ENST00000503945 EPS15P42566 896 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms