RNA–Protein interactions for RNA: ENST00000502604.5

CDK7-202, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5 BASIC

Gene CDK7, Length 1,455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-202ENST00000502604 CHL1O00533 1208 aa15.49■□□□□ 0.07
CDK7-202ENST00000502604 APLP1P51693 650 aa15.49■□□□□ 0.07
CDK7-202ENST00000502604 SUSD4Q5VX71 490 aa15.49■□□□□ 0.07
CDK7-202ENST00000502604 GIGYF2Q6Y7W6 1299 aaKnown RBP15.49■□□□□ 0.07
CDK7-202ENST00000502604 ZNF34Q8IZ26 560 aa15.49■□□□□ 0.07
CDK7-202ENST00000502604 SPINK5Q9NQ38 1064 aaPredicted RBP15.49■□□□□ 0.07
CDK7-202ENST00000502604 ZBTB22O15209 634 aa15.48■□□□□ 0.07
CDK7-202ENST00000502604 CRY2Q49AN0 593 aa15.48■□□□□ 0.07
CDK7-202ENST00000502604 CCDC93Q567U6 631 aa15.48■□□□□ 0.07
CDK7-202ENST00000502604 RIC1Q4ADV7 1423 aa15.48■□□□□ 0.07
CDK7-202ENST00000502604 NTSR2O95665 410 aa15.47■□□□□ 0.07
CDK7-202ENST00000502604 MYCNP04198 464 aaPredicted RBP15.47■□□□□ 0.07
CDK7-202ENST00000502604 VEGFAP15692 232 aaPredicted RBP15.47■□□□□ 0.07
CDK7-202ENST00000502604 FSTL1Q12841 308 aa15.47■□□□□ 0.07
CDK7-202ENST00000502604 POTECB2RU33 542 aa15.46■□□□□ 0.07
CDK7-202ENST00000502604 SNED1Q8TER0 1413 aa15.46■□□□□ 0.07
CDK7-202ENST00000502604 ALDH1B1P30837 517 aa15.46■□□□□ 0.06
CDK7-202ENST00000502604 HTRA3P83110 453 aa15.46■□□□□ 0.06
CDK7-202ENST00000502604 AIMP1Q12904 312 aaKnown RBP15.46■□□□□ 0.06
CDK7-202ENST00000502604 DPY19L2Q6NUT2 758 aa15.46■□□□□ 0.06
CDK7-202ENST00000502604 C3orf67Q6ZVT6 689 aa15.46■□□□□ 0.06
CDK7-202ENST00000502604 COPS6Q7L5N1 327 aa15.46■□□□□ 0.06
CDK7-202ENST00000502604 XAGE3Q8WTP9 111 aa15.46■□□□□ 0.06
CDK7-202ENST00000502604 ZNF277Q9NRM2 450 aaPredicted RBP15.46■□□□□ 0.06
CDK7-202ENST00000502604 TAF1P21675 1872 aa15.45■□□□□ 0.06
CDK7-202ENST00000502604 FKBP4Q02790 459 aaKnown RBP eCLIP15.45■□□□□ 0.06
CDK7-202ENST00000502604 SLC51AQ86UW1 340 aa15.45■□□□□ 0.06
CDK7-202ENST00000502604 SMC1BQ8NDV3 1235 aa15.45■□□□□ 0.06
CDK7-202ENST00000502604 RPGRQ92834 1020 aaKnown RBP15.45■□□□□ 0.06
CDK7-202ENST00000502604 CHPF2Q9P2E5 772 aa15.45■□□□□ 0.06
CDK7-202ENST00000502604 SCN4AP35499 1836 aa15.44■□□□□ 0.06
CDK7-202ENST00000502604 APAF1O14727 1248 aa15.44■□□□□ 0.06
CDK7-202ENST00000502604 DDNO94850 711 aaPredicted RBP15.44■□□□□ 0.06
CDK7-202ENST00000502604 PARP10Q53GL7 1025 aa15.44■□□□□ 0.06
CDK7-202ENST00000502604 PPP1R42Q7Z4L9 355 aa15.44■□□□□ 0.06
CDK7-202ENST00000502604 DNAJC5GQ8N7S2 189 aa15.44■□□□□ 0.06
CDK7-202ENST00000502604 DDX21Q9NR30 783 aaKnown RBP eCLIP15.44■□□□□ 0.06
CDK7-202ENST00000502604 HOXA10P31260 410 aaPredicted RBP15.43■□□□□ 0.06
CDK7-202ENST00000502604 HDGFL1Q5TGJ6 251 aa15.43■□□□□ 0.06
CDK7-202ENST00000502604 DDX60Q8IY21 1712 aaKnown RBP15.43■□□□□ 0.06
CDK7-202ENST00000502604 RTKN2Q8IZC4 609 aa15.43■□□□□ 0.06
CDK7-202ENST00000502604 CFAP44Q96MT7 982 aa15.43■□□□□ 0.06
CDK7-202ENST00000502604 MBIPQ9NS73 344 aa15.43■□□□□ 0.06
CDK7-202ENST00000502604 COL4A5P29400 1685 aa15.42■□□□□ 0.06
CDK7-202ENST00000502604 UTP14AQ9BVJ6 771 aaKnown RBP15.42■□□□□ 0.06
CDK7-202ENST00000502604 ZNF541Q9H0D2 1346 aa15.41■□□□□ 0.06
CDK7-202ENST00000502604 CCDC184Q52MB2 194 aa15.41■□□□□ 0.06
CDK7-202ENST00000502604 SYNE4Q8N205 404 aa15.41■□□□□ 0.06
CDK7-202ENST00000502604 ZNF428Q96B54 188 aa15.41■□□□□ 0.06
CDK7-202ENST00000502604 TCERG1O14776 1098 aaKnown RBP15.4■□□□□ 0.06
CDK7-202ENST00000502604 HOXB7P09629 217 aa15.4■□□□□ 0.06
CDK7-202ENST00000502604 ZNF853P0CG23 659 aa15.4■□□□□ 0.06
CDK7-202ENST00000502604 IARSP41252 1262 aaKnown RBP15.4■□□□□ 0.06
CDK7-202ENST00000502604 HSP90AB3PQ58FF7 597 aa15.4■□□□□ 0.06
CDK7-202ENST00000502604 DUSP27Q5VZP5 1158 aa15.4■□□□□ 0.06
CDK7-202ENST00000502604 NLRP10Q86W26 655 aa15.4■□□□□ 0.06
CDK7-202ENST00000502604 RBM17Q96I25 401 aaKnown RBP15.4■□□□□ 0.06
CDK7-202ENST00000502604 PPEF1O14829 653 aaPredicted RBP15.4■□□□□ 0.06
CDK7-202ENST00000502604 POTEIP0CG38 1075 aa15.4■□□□□ 0.06
CDK7-202ENST00000502604 POTEJP0CG39 1038 aa15.4■□□□□ 0.06
CDK7-202ENST00000502604 TCIRG1Q13488 830 aa15.4■□□□□ 0.06
CDK7-202ENST00000502604 SAMD1Q6SPF0 538 aaPredicted RBP15.4■□□□□ 0.06
CDK7-202ENST00000502604 NLRP3Q96P20 1036 aa15.4■□□□□ 0.06
CDK7-202ENST00000502604 CRAMP1Q96RY5 1269 aa15.4■□□□□ 0.06
CDK7-202ENST00000502604 PSMD1Q99460 953 aa15.4■□□□□ 0.06
CDK7-202ENST00000502604 HCLS1P14317 486 aaPredicted RBP15.39■□□□□ 0.05
CDK7-202ENST00000502604 SLC10A5Q5PT55 438 aa15.39■□□□□ 0.05
CDK7-202ENST00000502604 IFT57Q9NWB7 429 aa15.39■□□□□ 0.05
CDK7-202ENST00000502604 DBF4Q9UBU7 674 aaPredicted RBP15.39■□□□□ 0.05
CDK7-202ENST00000502604 ABCC4O15439 1325 aa15.38■□□□□ 0.05
CDK7-202ENST00000502604 RNF123Q5XPI4 1314 aa15.38■□□□□ 0.05
CDK7-202ENST00000502604 CC2D2BQ6DHV5 1058 aa15.38■□□□□ 0.05
CDK7-202ENST00000502604 L3MBTL3Q96JM7 780 aaPredicted RBP15.38■□□□□ 0.05
CDK7-202ENST00000502604 TRMT112Q9UI30 125 aaKnown RBP15.38■□□□□ 0.05
CDK7-202ENST00000502604 FZD9O00144 591 aa15.37■□□□□ 0.05
CDK7-202ENST00000502604 PLBD2Q8NHP8 589 aa15.37■□□□□ 0.05
CDK7-202ENST00000502604 KLRG1Q96E93 195 aa15.37■□□□□ 0.05
CDK7-202ENST00000502604 SH3TC1Q8TE82 1336 aa15.36■□□□□ 0.05
CDK7-202ENST00000502604 ADAMTSL1Q8N6G6 1762 aa15.36■□□□□ 0.05
CDK7-202ENST00000502604 ELL2O00472 640 aaPredicted RBP15.36■□□□□ 0.05
CDK7-202ENST00000502604 CAPN15O75808 1086 aa15.36■□□□□ 0.05
CDK7-202ENST00000502604 GNAI1P63096 354 aa15.36■□□□□ 0.05
CDK7-202ENST00000502604 ANKRD13DQ6ZTN6 518 aa15.36■□□□□ 0.05
CDK7-202ENST00000502604 HYPKQ9NX55 129 aa15.36■□□□□ 0.05
CDK7-202ENST00000502604 LRRC37AA6NMS7 1700 aa15.36■□□□□ 0.05
CDK7-202ENST00000502604 LTBP1Q14766 1721 aa15.36■□□□□ 0.05
CDK7-202ENST00000502604 IQCA1LA6NCM1 817 aa15.35■□□□□ 0.05
CDK7-202ENST00000502604 ATP5J2-PTCD1G3V325 749 aa15.35■□□□□ 0.05
CDK7-202ENST00000502604 CALD1Q05682 793 aaKnown RBP15.35■□□□□ 0.05
CDK7-202ENST00000502604 TAF1DQ9H5J8 278 aaPredicted RBP15.35■□□□□ 0.05
CDK7-202ENST00000502604 COL4A1P02462 1669 aa15.35■□□□□ 0.05
CDK7-202ENST00000502604 CCER2I3L3R5 266 aa15.34■□□□□ 0.05
CDK7-202ENST00000502604 CHADLQ6NUI6 762 aa15.34■□□□□ 0.05
CDK7-202ENST00000502604 C8orf58Q8NAV2 365 aa15.34■□□□□ 0.05
CDK7-202ENST00000502604 JDP2Q8WYK2 163 aa15.34■□□□□ 0.05
CDK7-202ENST00000502604 ISCA1Q9BUE6 129 aa15.34■□□□□ 0.05
CDK7-202ENST00000502604 ATP6V0A2Q9Y487 856 aa15.34■□□□□ 0.05
CDK7-202ENST00000502604 GRIPAP1Q4V328 841 aa15.33■□□□□ 0.05
CDK7-202ENST00000502604 LARGE2Q8N3Y3 721 aa15.33■□□□□ 0.05
CDK7-202ENST00000502604 FAM89AQ96GI7 184 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms