RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 ZNF34Q8IZ26 560 aa14.45□□□□□ -0.1
LSAMP-206ENST00000498645 SYNE4Q8N205 404 aa14.45□□□□□ -0.1
LSAMP-206ENST00000498645 PCNTO95613 3336 aa14.45□□□□□ -0.1
LSAMP-206ENST00000498645 IQCA1LA6NCM1 817 aa14.44□□□□□ -0.1
LSAMP-206ENST00000498645 KRT24Q2M2I5 525 aa14.44□□□□□ -0.1
LSAMP-206ENST00000498645 CHADLQ6NUI6 762 aa14.44□□□□□ -0.1
LSAMP-206ENST00000498645 C3orf67Q6ZVT6 689 aa14.44□□□□□ -0.1
LSAMP-206ENST00000498645 SLC51AQ86UW1 340 aa14.44□□□□□ -0.1
LSAMP-206ENST00000498645 RUNDC1Q96C34 613 aa14.44□□□□□ -0.1
LSAMP-206ENST00000498645 RBM17Q96I25 401 aaKnown RBP14.44□□□□□ -0.1
LSAMP-206ENST00000498645 BABAM1Q9NWV8 329 aa14.44□□□□□ -0.1
LSAMP-206ENST00000498645 RIC1Q4ADV7 1423 aa14.43□□□□□ -0.1
LSAMP-206ENST00000498645 LAMB2P55268 1798 aa14.43□□□□□ -0.1
LSAMP-206ENST00000498645 PPEF1O14829 653 aaPredicted RBP14.43□□□□□ -0.1
LSAMP-206ENST00000498645 PARP10Q53GL7 1025 aa14.43□□□□□ -0.1
LSAMP-206ENST00000498645 EAPPQ56P03 285 aaPredicted RBP14.43□□□□□ -0.1
LSAMP-206ENST00000498645 COPS6Q7L5N1 327 aa14.43□□□□□ -0.1
LSAMP-206ENST00000498645 LRP10Q7Z4F1 713 aa14.43□□□□□ -0.1
LSAMP-206ENST00000498645 XAGE3Q8WTP9 111 aa14.43□□□□□ -0.1
LSAMP-206ENST00000498645 ZNF428Q96B54 188 aa14.43□□□□□ -0.1
LSAMP-206ENST00000498645 UTP14AQ9BVJ6 771 aaKnown RBP14.43□□□□□ -0.1
LSAMP-206ENST00000498645 JMYQ8N9B5 988 aa14.42□□□□□ -0.1
LSAMP-206ENST00000498645 JDP2Q8WYK2 163 aa14.42□□□□□ -0.1
LSAMP-206ENST00000498645 L3MBTL3Q96JM7 780 aaPredicted RBP14.42□□□□□ -0.1
LSAMP-206ENST00000498645 PSMD1Q99460 953 aa14.42□□□□□ -0.1
LSAMP-206ENST00000498645 TAF1DQ9H5J8 278 aaPredicted RBP14.42□□□□□ -0.1
LSAMP-206ENST00000498645 ADAMTS8Q9UP79 889 aa14.42□□□□□ -0.1
LSAMP-206ENST00000498645 RNF123Q5XPI4 1314 aa14.41□□□□□ -0.1
LSAMP-206ENST00000498645 SNED1Q8TER0 1413 aa14.41□□□□□ -0.1
LSAMP-206ENST00000498645 HOXA10P31260 410 aaPredicted RBP14.41□□□□□ -0.1
LSAMP-206ENST00000498645 NLRP3Q96P20 1036 aa14.41□□□□□ -0.1
LSAMP-206ENST00000498645 HACL1Q9UJ83 578 aa14.41□□□□□ -0.1
LSAMP-206ENST00000498645 TRIM35Q9UPQ4 493 aa14.41□□□□□ -0.1
LSAMP-206ENST00000498645 CLEC11AQ9Y240 323 aa14.41□□□□□ -0.1
LSAMP-206ENST00000498645 COL4A5P29400 1685 aa14.41□□□□□ -0.1
LSAMP-206ENST00000498645 FZD9O00144 591 aa14.4□□□□□ -0.1
LSAMP-206ENST00000498645 CHL1O00533 1208 aa14.4□□□□□ -0.1
LSAMP-206ENST00000498645 HDGFL1Q5TGJ6 251 aa14.4□□□□□ -0.1
LSAMP-206ENST00000498645 CC2D2BQ6DHV5 1058 aa14.4□□□□□ -0.1
LSAMP-206ENST00000498645 LDHDQ86WU2 507 aa14.4□□□□□ -0.1
LSAMP-206ENST00000498645 LARGE2Q8N3Y3 721 aa14.4□□□□□ -0.1
LSAMP-206ENST00000498645 CRAMP1Q96RY5 1269 aa14.4□□□□□ -0.1
LSAMP-206ENST00000498645 TMX4Q9H1E5 349 aaPredicted RBP14.4□□□□□ -0.1
LSAMP-206ENST00000498645 CHPF2Q9P2E5 772 aa14.4□□□□□ -0.1
LSAMP-206ENST00000498645 GJA3Q9Y6H8 435 aa14.4□□□□□ -0.1
LSAMP-206ENST00000498645 EPHX2P34913 555 aa14.39□□□□□ -0.11
LSAMP-206ENST00000498645 EIF6P56537 245 aaKnown RBP14.39□□□□□ -0.11
LSAMP-206ENST00000498645 HSP90AB3PQ58FF7 597 aa14.39□□□□□ -0.11
LSAMP-206ENST00000498645 DDX21Q9NR30 783 aaKnown RBP eCLIP14.39□□□□□ -0.11
LSAMP-206ENST00000498645 MKRN1Q9UHC7 482 aaKnown RBP14.39□□□□□ -0.11
LSAMP-206ENST00000498645 TAF1P21675 1872 aa14.39□□□□□ -0.11
LSAMP-206ENST00000498645 ABCC4O15439 1325 aa14.39□□□□□ -0.11
LSAMP-206ENST00000498645 HCLS1P14317 486 aaPredicted RBP14.38□□□□□ -0.11
LSAMP-206ENST00000498645 NLRP10Q86W26 655 aa14.38□□□□□ -0.11
LSAMP-206ENST00000498645 GPC2Q8N158 579 aa14.38□□□□□ -0.11
LSAMP-206ENST00000498645 PRKRIP1Q9H875 184 aaPredicted RBP14.38□□□□□ -0.11
LSAMP-206ENST00000498645 CREBZFQ9NS37 354 aa14.38□□□□□ -0.11
LSAMP-206ENST00000498645 TRMT112Q9UI30 125 aaKnown RBP14.38□□□□□ -0.11
LSAMP-206ENST00000498645 TCIRG1Q13488 830 aa14.37□□□□□ -0.11
LSAMP-206ENST00000498645 NIM1KQ8IY84 436 aa14.37□□□□□ -0.11
LSAMP-206ENST00000498645 SH3TC1Q8TE82 1336 aa14.37□□□□□ -0.11
LSAMP-206ENST00000498645 ADAMTSL1Q8N6G6 1762 aa14.37□□□□□ -0.11
LSAMP-206ENST00000498645 DDX60Q8IY21 1712 aaKnown RBP14.36□□□□□ -0.11
LSAMP-206ENST00000498645 PPIP5K2O43314 1243 aa14.36□□□□□ -0.11
LSAMP-206ENST00000498645 HSPA1AP0DMV8 641 aaKnown RBP14.36□□□□□ -0.11
LSAMP-206ENST00000498645 HSPA1BP0DMV9 641 aaKnown RBP14.36□□□□□ -0.11
LSAMP-206ENST00000498645 LMOD1P29536 600 aaPredicted RBP14.36□□□□□ -0.11
LSAMP-206ENST00000498645 AOC3Q16853 763 aa14.36□□□□□ -0.11
LSAMP-206ENST00000498645 GRIPAP1Q4V328 841 aa14.36□□□□□ -0.11
LSAMP-206ENST00000498645 SLC10A5Q5PT55 438 aa14.36□□□□□ -0.11
LSAMP-206ENST00000498645 COL13A1Q5TAT6 717 aaPredicted RBP14.36□□□□□ -0.11
LSAMP-206ENST00000498645 ATP6V0A2Q9Y487 856 aa14.36□□□□□ -0.11
LSAMP-206ENST00000498645 LTBP1Q14766 1721 aa14.35□□□□□ -0.11
LSAMP-206ENST00000498645 DUSP27Q5VZP5 1158 aa14.35□□□□□ -0.11
LSAMP-206ENST00000498645 MAP1SQ66K74 1059 aaPredicted RBP14.35□□□□□ -0.11
LSAMP-206ENST00000498645 DDX46Q7L014 1031 aaKnown RBP14.35□□□□□ -0.11
LSAMP-206ENST00000498645 PNMA8AQ86V59 439 aaPredicted RBP14.35□□□□□ -0.11
LSAMP-206ENST00000498645 CFAP44Q96MT7 982 aa14.35□□□□□ -0.11
LSAMP-206ENST00000498645 MBIPQ9NS73 344 aa14.35□□□□□ -0.11
LSAMP-206ENST00000498645 DBF4Q9UBU7 674 aaPredicted RBP14.35□□□□□ -0.11
LSAMP-206ENST00000498645 PASKQ96RG2 1323 aa14.35□□□□□ -0.11
LSAMP-206ENST00000498645 ATP5J2-PTCD1G3V325 749 aa14.34□□□□□ -0.11
LSAMP-206ENST00000498645 APAF1O14727 1248 aa14.34□□□□□ -0.11
LSAMP-206ENST00000498645 HOXB7P09629 217 aa14.34□□□□□ -0.11
LSAMP-206ENST00000498645 DPP8Q6V1X1 898 aaPredicted RBP14.34□□□□□ -0.11
LSAMP-206ENST00000498645 ANKRD13DQ6ZTN6 518 aa14.34□□□□□ -0.11
LSAMP-206ENST00000498645 PLBD2Q8NHP8 589 aa14.34□□□□□ -0.11
LSAMP-206ENST00000498645 TMEM88BA6NKF7 163 aa14.33□□□□□ -0.12
LSAMP-206ENST00000498645 ITGBL1O95965 494 aaPredicted RBP14.33□□□□□ -0.12
LSAMP-206ENST00000498645 RTL5Q5HYW3 569 aaPredicted RBP14.33□□□□□ -0.12
LSAMP-206ENST00000498645 CNTROBQ8N137 903 aa14.33□□□□□ -0.12
LSAMP-206ENST00000498645 MPNDQ8N594 471 aa14.33□□□□□ -0.12
LSAMP-206ENST00000498645 SUPT20HQ8NEM7 779 aa14.33□□□□□ -0.12
LSAMP-206ENST00000498645 ELL2O00472 640 aaPredicted RBP14.32□□□□□ -0.12
LSAMP-206ENST00000498645 BBOX1O75936 387 aa14.32□□□□□ -0.12
LSAMP-206ENST00000498645 EPS15P42566 896 aa14.32□□□□□ -0.12
LSAMP-206ENST00000498645 SCNN1DP51172 638 aa14.32□□□□□ -0.12
LSAMP-206ENST00000498645 GRAPQ13588 217 aa14.32□□□□□ -0.12
LSAMP-206ENST00000498645 GRAPLQ8TC17 118 aaPredicted RBP14.32□□□□□ -0.12
LSAMP-206ENST00000498645 FAM89AQ96GI7 184 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms