RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 CHMP7Q8WUX9 453 aaPredicted RBP13.53□□□□□ -0.24
PBX1-211ENST00000498497 VEZTQ9HBM0 779 aa13.53□□□□□ -0.24
PBX1-211ENST00000498497 FANCGO15287 622 aa13.53□□□□□ -0.24
PBX1-211ENST00000498497 PPP1R12BO60237 982 aaPredicted RBP13.53□□□□□ -0.24
PBX1-211ENST00000498497 PARD3BQ8TEW8 1205 aa13.53□□□□□ -0.24
PBX1-211ENST00000498497 FAXDC2Q96IV6 333 aa13.53□□□□□ -0.24
PBX1-211ENST00000498497 KIF9Q9HAQ2 790 aa13.53□□□□□ -0.24
PBX1-211ENST00000498497 RPAP1Q9BWH6 1393 aaPredicted RBP13.53□□□□□ -0.24
PBX1-211ENST00000498497 SRGAP3O43295 1099 aa13.53□□□□□ -0.24
PBX1-211ENST00000498497 GNL3LQ9NVN8 582 aaKnown RBP13.53□□□□□ -0.24
PBX1-211ENST00000498497 ODF2LQ9ULJ1 636 aa13.53□□□□□ -0.24
PBX1-211ENST00000498497 EXOC5O00471 708 aa13.52□□□□□ -0.24
PBX1-211ENST00000498497 INHBEP58166 350 aa13.52□□□□□ -0.24
PBX1-211ENST00000498497 CCT2P78371 535 aaKnown RBP13.52□□□□□ -0.24
PBX1-211ENST00000498497 APOBRQ0VD83 1088 aa13.52□□□□□ -0.24
PBX1-211ENST00000498497 SPATA32Q96LK8 384 aa13.52□□□□□ -0.24
PBX1-211ENST00000498497 AK2P54819 239 aa13.52□□□□□ -0.25
PBX1-211ENST00000498497 SWT1Q5T5J6 900 aaKnown RBP13.52□□□□□ -0.25
PBX1-211ENST00000498497 AP1ARQ63HQ0 302 aa13.52□□□□□ -0.25
PBX1-211ENST00000498497 SCLT1Q96NL6 688 aa13.52□□□□□ -0.25
PBX1-211ENST00000498497 IRX2Q9BZI1 471 aaPredicted RBP13.52□□□□□ -0.25
PBX1-211ENST00000498497 FAM107BQ9H098 131 aa13.52□□□□□ -0.25
PBX1-211ENST00000498497 IL25Q9H293 177 aa13.52□□□□□ -0.25
PBX1-211ENST00000498497 A0A087WUV0 522 aaPredicted RBP13.51□□□□□ -0.25
PBX1-211ENST00000498497 UPP2O95045 317 aa13.51□□□□□ -0.25
PBX1-211ENST00000498497 CUL4AQ13619 759 aa13.51□□□□□ -0.25
PBX1-211ENST00000498497 CDC37L1Q7L3B6 337 aa13.51□□□□□ -0.25
PBX1-211ENST00000498497 TRIM6Q9C030 488 aaPredicted RBP13.51□□□□□ -0.25
PBX1-211ENST00000498497 GCC2Q8IWJ2 1684 aa13.51□□□□□ -0.25
PBX1-211ENST00000498497 SUPT6HQ7KZ85 1726 aaKnown RBP13.51□□□□□ -0.25
PBX1-211ENST00000498497 ATP2C2O75185 946 aa13.51□□□□□ -0.25
PBX1-211ENST00000498497 SF3A3Q12874 501 aaKnown RBP eCLIP13.51□□□□□ -0.25
PBX1-211ENST00000498497 CEP120Q8N960 986 aa13.51□□□□□ -0.25
PBX1-211ENST00000498497 IFNKQ9P0W0 207 aa13.51□□□□□ -0.25
PBX1-211ENST00000498497 E9PCH4 1651 aa13.51□□□□□ -0.25
PBX1-211ENST00000498497 LGR5O75473 907 aa13.5□□□□□ -0.25
PBX1-211ENST00000498497 CALRP27797 417 aaKnown RBP13.5□□□□□ -0.25
PBX1-211ENST00000498497 NBPF11Q86T75 865 aa13.5□□□□□ -0.25
PBX1-211ENST00000498497 PDILTQ8N807 584 aa13.5□□□□□ -0.25
PBX1-211ENST00000498497 WDR24Q96S15 920 aa13.5□□□□□ -0.25
PBX1-211ENST00000498497 L2HGDHQ9H9P8 463 aa13.5□□□□□ -0.25
PBX1-211ENST00000498497 ATP6V1DQ9Y5K8 247 aa13.5□□□□□ -0.25
PBX1-211ENST00000498497 FAM169AQ9Y6X4 670 aa13.5□□□□□ -0.25
PBX1-211ENST00000498497 CDK13Q14004 1512 aaKnown RBP13.5□□□□□ -0.25
PBX1-211ENST00000498497 INPP5BP32019 993 aa13.5□□□□□ -0.25
PBX1-211ENST00000498497 ETF1P62495 437 aaKnown RBP13.5□□□□□ -0.25
PBX1-211ENST00000498497 SLC4A10Q6U841 1118 aa13.5□□□□□ -0.25
PBX1-211ENST00000498497 JAKMIP3Q5VZ66 844 aa13.5□□□□□ -0.25
PBX1-211ENST00000498497 LARP1BQ659C4 914 aaKnown RBP13.5□□□□□ -0.25
PBX1-211ENST00000498497 ZCWPW1Q9H0M4 648 aa13.5□□□□□ -0.25
PBX1-211ENST00000498497 SLC12A5Q9H2X9 1139 aa13.5□□□□□ -0.25
PBX1-211ENST00000498497 KIF4AO95239 1232 aa13.49□□□□□ -0.25
PBX1-211ENST00000498497 KRT85P78386 507 aa13.49□□□□□ -0.25
PBX1-211ENST00000498497 RNF187Q5TA31 235 aaPredicted RBP13.49□□□□□ -0.25
PBX1-211ENST00000498497 JMYQ8N9B5 988 aa13.49□□□□□ -0.25
PBX1-211ENST00000498497 DESI2Q9BSY9 194 aa13.49□□□□□ -0.25
PBX1-211ENST00000498497 FTOQ9C0B1 505 aaKnown RBP eCLIP13.49□□□□□ -0.25
PBX1-211ENST00000498497 SPG7Q9UQ90 795 aa13.49□□□□□ -0.25
PBX1-211ENST00000498497 CCDC158Q5M9N0 1113 aa13.49□□□□□ -0.25
PBX1-211ENST00000498497 CFAP53Q96M91 514 aa13.49□□□□□ -0.25
PBX1-211ENST00000498497 ARMCX5Q6P1M9 558 aa13.48□□□□□ -0.25
PBX1-211ENST00000498497 URB2Q14146 1524 aaKnown RBP13.48□□□□□ -0.25
PBX1-211ENST00000498497 UHRF1BP1Q6BDS2 1440 aa13.48□□□□□ -0.25
PBX1-211ENST00000498497 ZMYND10O75800 440 aa13.48□□□□□ -0.25
PBX1-211ENST00000498497 A1BGP04217 495 aa13.48□□□□□ -0.25
PBX1-211ENST00000498497 LMOD1P29536 600 aaPredicted RBP13.48□□□□□ -0.25
PBX1-211ENST00000498497 UNC5CLQ8IV45 518 aa13.48□□□□□ -0.25
PBX1-211ENST00000498497 DHX58Q96C10 678 aa13.48□□□□□ -0.25
PBX1-211ENST00000498497 XPO4Q9C0E2 1151 aaKnown RBP13.48□□□□□ -0.25
PBX1-211ENST00000498497 ABCB6Q9NP58 842 aa13.48□□□□□ -0.25
PBX1-211ENST00000498497 RAD54L2Q9Y4B4 1467 aa13.48□□□□□ -0.25
PBX1-211ENST00000498497 HMMRO75330 724 aa13.48□□□□□ -0.25
PBX1-211ENST00000498497 USP8P40818 1118 aa13.48□□□□□ -0.25
PBX1-211ENST00000498497 GNAI1P63096 354 aa13.48□□□□□ -0.25
PBX1-211ENST00000498497 TBC1D8BQ0IIM8 1120 aa13.48□□□□□ -0.25
PBX1-211ENST00000498497 NEDD9Q14511 834 aa13.48□□□□□ -0.25
PBX1-211ENST00000498497 CCDC93Q567U6 631 aa13.48□□□□□ -0.25
PBX1-211ENST00000498497 TDRD7Q8NHU6 1098 aaKnown RBP13.48□□□□□ -0.25
PBX1-211ENST00000498497 MTMR6Q9Y217 621 aa13.48□□□□□ -0.25
PBX1-211ENST00000498497 MRFAP1Q9Y605 127 aa13.48□□□□□ -0.25
PBX1-211ENST00000498497 SNAPC4Q5SXM2 1469 aa13.47□□□□□ -0.25
PBX1-211ENST00000498497 CCDC12Q8WUD4 166 aaPredicted RBP13.47□□□□□ -0.25
PBX1-211ENST00000498497 ESYT1Q9BSJ8 1104 aa13.47□□□□□ -0.25
PBX1-211ENST00000498497 EFCAB8A8MWE9 144 aa13.47□□□□□ -0.25
PBX1-211ENST00000498497 WDHD1O75717 1129 aaPredicted RBP13.47□□□□□ -0.25
PBX1-211ENST00000498497 LRRFIP1Q32MZ4 808 aaKnown RBP13.47□□□□□ -0.25
PBX1-211ENST00000498497 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.47□□□□□ -0.25
PBX1-211ENST00000498497 MRFAP1L1Q96HT8 127 aa13.47□□□□□ -0.25
PBX1-211ENST00000498497 CCDC144AA2RUR9 1427 aa13.47□□□□□ -0.25
PBX1-211ENST00000498497 EBAG9O00559 213 aa13.46□□□□□ -0.25
PBX1-211ENST00000498497 NBPF7P0C2Y1 421 aaPredicted RBP13.46□□□□□ -0.25
PBX1-211ENST00000498497 TMPOP42166 694 aaKnown RBP13.46□□□□□ -0.25
PBX1-211ENST00000498497 SAFB2Q14151 953 aaKnown RBP eCLIP13.46□□□□□ -0.25
PBX1-211ENST00000498497 SMARCC1Q92922 1105 aaPredicted RBP13.46□□□□□ -0.25
PBX1-211ENST00000498497 INTS4Q96HW7 963 aaKnown RBP13.46□□□□□ -0.25
PBX1-211ENST00000498497 PRAG1Q86YV5 1406 aa13.46□□□□□ -0.25
PBX1-211ENST00000498497 UGGT2Q9NYU1 1516 aa13.46□□□□□ -0.25
PBX1-211ENST00000498497 RNF40O75150 1001 aa13.46□□□□□ -0.25
PBX1-211ENST00000498497 PPFIA4O75335 1185 aa13.46□□□□□ -0.25
PBX1-211ENST00000498497 RUFY3Q7L099 469 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms