RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 GRIN3BO60391 1043 aa7.97□□□□□ -1.13
CACNA1C-229ENST00000496818 TMF1P82094 1093 aa7.97□□□□□ -1.13
CACNA1C-229ENST00000496818 SNRKQ9NRH2 765 aa7.97□□□□□ -1.13
CACNA1C-229ENST00000496818 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.97□□□□□ -1.13
CACNA1C-229ENST00000496818 PCDHGC3Q9UN70 934 aa7.97□□□□□ -1.13
CACNA1C-229ENST00000496818 FLT4P35916 1363 aa7.97□□□□□ -1.13
CACNA1C-229ENST00000496818 PALLDQ8WX93 1383 aa7.97□□□□□ -1.13
CACNA1C-229ENST00000496818 AP1G2O75843 785 aa7.96□□□□□ -1.14
CACNA1C-229ENST00000496818 TATP17735 454 aaPredicted RBP7.96□□□□□ -1.14
CACNA1C-229ENST00000496818 BCAMP50895 628 aa7.96□□□□□ -1.14
CACNA1C-229ENST00000496818 USP46P62068 366 aa7.96□□□□□ -1.14
CACNA1C-229ENST00000496818 MCM6Q14566 821 aa7.96□□□□□ -1.14
CACNA1C-229ENST00000496818 PUS10Q3MIT2 529 aaKnown RBP7.96□□□□□ -1.14
CACNA1C-229ENST00000496818 CDCA8Q53HL2 280 aa7.96□□□□□ -1.14
CACNA1C-229ENST00000496818 FLAD1Q8NFF5 587 aa7.96□□□□□ -1.14
CACNA1C-229ENST00000496818 KIF24Q5T7B8 1368 aa7.96□□□□□ -1.14
CACNA1C-229ENST00000496818 QSER1Q2KHR3 1735 aa7.95□□□□□ -1.14
CACNA1C-229ENST00000496818 ST20-MTHFSA0A0A6YYL1 179 aa7.95□□□□□ -1.14
CACNA1C-229ENST00000496818 LILRB3O75022 631 aa7.95□□□□□ -1.14
CACNA1C-229ENST00000496818 KCNQ4P56696 695 aa7.95□□□□□ -1.14
CACNA1C-229ENST00000496818 RRS1Q15050 365 aaKnown RBP7.95□□□□□ -1.14
CACNA1C-229ENST00000496818 NLGN2Q8NFZ4 835 aa7.95□□□□□ -1.14
CACNA1C-229ENST00000496818 TSC1Q92574 1164 aa7.95□□□□□ -1.14
CACNA1C-229ENST00000496818 TESK2Q96S53 571 aa7.95□□□□□ -1.14
CACNA1C-229ENST00000496818 INSRP06213 1382 aa7.95□□□□□ -1.14
CACNA1C-229ENST00000496818 PPP2R2DQ66LE6 453 aa7.94□□□□□ -1.14
CACNA1C-229ENST00000496818 MSL1Q68DK7 614 aa7.94□□□□□ -1.14
CACNA1C-229ENST00000496818 USHBP1Q8N6Y0 703 aa7.94□□□□□ -1.14
CACNA1C-229ENST00000496818 ANKK1Q8NFD2 765 aa7.94□□□□□ -1.14
CACNA1C-229ENST00000496818 SYMPKQ92797 1274 aaKnown RBP7.94□□□□□ -1.14
CACNA1C-229ENST00000496818 POM121Q96HA1 1249 aa7.94□□□□□ -1.14
CACNA1C-229ENST00000496818 GGNBP2Q9H3C7 697 aa7.94□□□□□ -1.14
CACNA1C-229ENST00000496818 C6orf229H3BNL8 230 aa7.93□□□□□ -1.14
CACNA1C-229ENST00000496818 ATP6V1AP38606 617 aa7.93□□□□□ -1.14
CACNA1C-229ENST00000496818 PPP4CP60510 307 aa7.93□□□□□ -1.14
CACNA1C-229ENST00000496818 TUSC1Q2TAM9 212 aa7.93□□□□□ -1.14
CACNA1C-229ENST00000496818 KMT5BQ4FZB7 885 aa7.93□□□□□ -1.14
CACNA1C-229ENST00000496818 GRIPAP1Q4V328 841 aa7.93□□□□□ -1.14
CACNA1C-229ENST00000496818 NBPF6Q5VWK0 638 aa7.93□□□□□ -1.14
CACNA1C-229ENST00000496818 SMARCC1Q92922 1105 aaPredicted RBP7.93□□□□□ -1.14
CACNA1C-229ENST00000496818 WNT2BQ93097 391 aa7.93□□□□□ -1.14
CACNA1C-229ENST00000496818 NBPF4Q96M43 638 aa7.93□□□□□ -1.14
CACNA1C-229ENST00000496818 ZBTB3Q9H5J0 574 aa7.93□□□□□ -1.14
CACNA1C-229ENST00000496818 HPS5Q9UPZ3 1129 aa7.93□□□□□ -1.14
CACNA1C-229ENST00000496818 ATP10DQ9P241 1426 aa7.93□□□□□ -1.14
CACNA1C-229ENST00000496818 LY75O60449 1722 aa7.92□□□□□ -1.14
CACNA1C-229ENST00000496818 GJA5P36382 358 aa7.92□□□□□ -1.14
CACNA1C-229ENST00000496818 TMEM259Q4ZIN3 620 aa7.92□□□□□ -1.14
CACNA1C-229ENST00000496818 MPRIPQ6WCQ1 1025 aa7.92□□□□□ -1.14
CACNA1C-229ENST00000496818 COL23A1Q86Y22 540 aaPredicted RBP7.92□□□□□ -1.14
CACNA1C-229ENST00000496818 CD2APQ9Y5K6 639 aa7.92□□□□□ -1.14
CACNA1C-229ENST00000496818 SHANK3Q9BYB0 1731 aa7.92□□□□□ -1.14
CACNA1C-229ENST00000496818 SOWAHBA6NEL2 793 aa7.91□□□□□ -1.14
CACNA1C-229ENST00000496818 FYB1O15117 783 aa7.91□□□□□ -1.14
CACNA1C-229ENST00000496818 YBX3P16989 372 aaKnown RBP eCLIP7.91□□□□□ -1.14
CACNA1C-229ENST00000496818 MTMR2Q13614 643 aa7.91□□□□□ -1.14
CACNA1C-229ENST00000496818 KRTAP3-3Q9BYR6 98 aa7.91□□□□□ -1.14
CACNA1C-229ENST00000496818 KRTAP3-2Q9BYR7 98 aa7.91□□□□□ -1.14
CACNA1C-229ENST00000496818 SPG7Q9UQ90 795 aa7.91□□□□□ -1.14
CACNA1C-229ENST00000496818 C5P01031 1676 aa7.91□□□□□ -1.14
CACNA1C-229ENST00000496818 COL24A1Q17RW2 1714 aa7.9□□□□□ -1.14
CACNA1C-229ENST00000496818 PLEKHG2Q9H7P9 1386 aa7.9□□□□□ -1.14
CACNA1C-229ENST00000496818 SPDYE5A6NIY4 337 aa7.9□□□□□ -1.14
CACNA1C-229ENST00000496818 FBLN1P23142 703 aa7.9□□□□□ -1.14
CACNA1C-229ENST00000496818 SSFA2P28290 1259 aa7.9□□□□□ -1.14
CACNA1C-229ENST00000496818 HSP90AB2PQ58FF8 381 aa7.9□□□□□ -1.14
CACNA1C-229ENST00000496818 PRPF38BQ5VTL8 546 aaKnown RBP7.9□□□□□ -1.14
CACNA1C-229ENST00000496818 BANK1Q8NDB2 785 aa7.9□□□□□ -1.14
CACNA1C-229ENST00000496818 C4BP0C0L5 1744 aa7.89□□□□□ -1.15
CACNA1C-229ENST00000496818 NCAPD2Q15021 1401 aa7.89□□□□□ -1.15
CACNA1C-229ENST00000496818 ADCY9O60503 1353 aa7.89□□□□□ -1.15
CACNA1C-229ENST00000496818 IGSF1Q8N6C5 1336 aa7.89□□□□□ -1.15
CACNA1C-229ENST00000496818 PPM1GO15355 546 aaPredicted RBP7.89□□□□□ -1.15
CACNA1C-229ENST00000496818 ACTN4O43707 911 aaKnown RBP7.89□□□□□ -1.15
CACNA1C-229ENST00000496818 RAD21O60216 631 aa7.89□□□□□ -1.15
CACNA1C-229ENST00000496818 APLP1P51693 650 aa7.89□□□□□ -1.15
CACNA1C-229ENST00000496818 CTDSPL2Q05D32 466 aa7.89□□□□□ -1.15
CACNA1C-229ENST00000496818 ARID3AQ99856 593 aa7.89□□□□□ -1.15
CACNA1C-229ENST00000496818 TMOD3Q9NYL9 352 aa7.89□□□□□ -1.15
CACNA1C-229ENST00000496818 SLC27A5Q9Y2P5 690 aa7.89□□□□□ -1.15
CACNA1C-229ENST00000496818 TUBGCP6Q96RT7 1819 aa7.89□□□□□ -1.15
CACNA1C-229ENST00000496818 KIF20BQ96Q89 1820 aa7.88□□□□□ -1.15
CACNA1C-229ENST00000496818 LOC102724428A0A0B4J2F2 783 aa7.88□□□□□ -1.15
CACNA1C-229ENST00000496818 CYP27B1O15528 508 aa7.88□□□□□ -1.15
CACNA1C-229ENST00000496818 USP17L8P0C7I0 530 aa7.88□□□□□ -1.15
CACNA1C-229ENST00000496818 SIK1P57059 783 aa7.88□□□□□ -1.15
CACNA1C-229ENST00000496818 MORN1Q5T089 497 aa7.88□□□□□ -1.15
CACNA1C-229ENST00000496818 ZNF526Q8TF50 670 aaPredicted RBP7.88□□□□□ -1.15
CACNA1C-229ENST00000496818 KCTD12Q96CX2 325 aaKnown RBP7.88□□□□□ -1.15
CACNA1C-229ENST00000496818 TSR3Q9UJK0 312 aaKnown RBP7.88□□□□□ -1.15
CACNA1C-229ENST00000496818 EMILIN1Q9Y6C2 1016 aa7.88□□□□□ -1.15
CACNA1C-229ENST00000496818 PKD1L3Q7Z443 1732 aa7.87□□□□□ -1.15
CACNA1C-229ENST00000496818 CFAP99D6REC4 459 aa7.87□□□□□ -1.15
CACNA1C-229ENST00000496818 APBB1O00213 710 aa7.87□□□□□ -1.15
CACNA1C-229ENST00000496818 CENPBP07199 599 aaPredicted RBP7.87□□□□□ -1.15
CACNA1C-229ENST00000496818 MTMR14Q8NCE2 650 aa7.87□□□□□ -1.15
CACNA1C-229ENST00000496818 NECTIN2Q92692 538 aa7.87□□□□□ -1.15
CACNA1C-229ENST00000496818 WBP1LQ9NX94 342 aa7.87□□□□□ -1.15
CACNA1C-229ENST00000496818 COG6Q9Y2V7 657 aa7.87□□□□□ -1.15
CACNA1C-229ENST00000496818 TOGARAM1Q9Y4F4 1720 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms