RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-204ENST00000496104 CCDC7Q96M83 1385 aa7.01□□□□□ -1.29
XPA-204ENST00000496104 ZBTB7CA1YPR0 619 aa7.01□□□□□ -1.29
XPA-204ENST00000496104 GLTPD2A6NH11 291 aa7.01□□□□□ -1.29
XPA-204ENST00000496104 RASSF10A6NK89 507 aa7.01□□□□□ -1.29
XPA-204ENST00000496104 INSM1Q01101 510 aaPredicted RBP7.01□□□□□ -1.29
XPA-204ENST00000496104 RASSF7Q02833 373 aa7.01□□□□□ -1.29
XPA-204ENST00000496104 CFAP70Q5T0N1 1121 aa7.01□□□□□ -1.29
XPA-204ENST00000496104 CCNL1Q9UK58 526 aaPredicted RBP7.01□□□□□ -1.29
XPA-204ENST00000496104 MAP2P11137 1827 aaKnown RBP7.01□□□□□ -1.29
XPA-204ENST00000496104 NSD3Q9BZ95 1437 aa7.01□□□□□ -1.29
XPA-204ENST00000496104 EIF3AQ14152 1382 aaKnown RBP7□□□□□ -1.29
XPA-204ENST00000496104 TRIM66O15016 1216 aa7□□□□□ -1.29
XPA-204ENST00000496104 WIPF1O43516 503 aa7□□□□□ -1.29
XPA-204ENST00000496104 FCHSD2O94868 740 aa7□□□□□ -1.29
XPA-204ENST00000496104 SPRYD7Q5W111 196 aa7□□□□□ -1.29
XPA-204ENST00000496104 ABTB2Q8N961 1025 aa7□□□□□ -1.29
XPA-204ENST00000496104 AAASQ9NRG9 546 aa7□□□□□ -1.29
XPA-204ENST00000496104 C4AP0C0L4 1744 aa7□□□□□ -1.29
XPA-204ENST00000496104 GPR37O15354 613 aa6.99□□□□□ -1.29
XPA-204ENST00000496104 COPS2P61201 443 aa6.99□□□□□ -1.29
XPA-204ENST00000496104 TGFB2P61812 414 aa6.99□□□□□ -1.29
XPA-204ENST00000496104 ZNF598Q86UK7 904 aaKnown RBP6.99□□□□□ -1.29
XPA-204ENST00000496104 ARHGEF25Q86VW2 580 aa6.99□□□□□ -1.29
XPA-204ENST00000496104 NUDT16Q96DE0 195 aaKnown RBP6.99□□□□□ -1.29
XPA-204ENST00000496104 HTTP42858 3142 aa6.99□□□□□ -1.29
XPA-204ENST00000496104 ZC3H4Q9UPT8 1303 aaKnown RBP6.99□□□□□ -1.29
XPA-204ENST00000496104 FAM208AQ9UK61 1670 aaKnown RBP6.98□□□□□ -1.29
XPA-204ENST00000496104 PRIM1P49642 420 aaKnown RBP6.98□□□□□ -1.29
XPA-204ENST00000496104 IL27Q8NEV9 243 aa6.98□□□□□ -1.29
XPA-204ENST00000496104 RSPH6AQ9H0K4 717 aa6.98□□□□□ -1.29
XPA-204ENST00000496104 CCDC88AQ3V6T2 1871 aa6.98□□□□□ -1.29
XPA-204ENST00000496104 WDR33Q9C0J8 1336 aaKnown RBP6.98□□□□□ -1.29
XPA-204ENST00000496104 PLEKHG3A1L390 1219 aa6.97□□□□□ -1.29
XPA-204ENST00000496104 RNF223E7ERA6 249 aa6.97□□□□□ -1.29
XPA-204ENST00000496104 TNFRSF10AO00220 468 aa6.97□□□□□ -1.29
XPA-204ENST00000496104 RNF40O75150 1001 aa6.97□□□□□ -1.29
XPA-204ENST00000496104 MMP10P09238 476 aa6.97□□□□□ -1.29
XPA-204ENST00000496104 NFX1Q12986 1120 aaKnown RBP6.97□□□□□ -1.29
XPA-204ENST00000496104 ZMYND15Q9H091 742 aa6.97□□□□□ -1.29
XPA-204ENST00000496104 KDM4CQ9H3R0 1056 aa6.97□□□□□ -1.29
XPA-204ENST00000496104 LAMA3Q16787 3333 aa6.96□□□□□ -1.29
XPA-204ENST00000496104 TRIOBPQ9H2D6 2365 aa6.96□□□□□ -1.29
XPA-204ENST00000496104 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.96□□□□□ -1.3
XPA-204ENST00000496104 MAP2K1Q02750 393 aaPredicted RBP6.96□□□□□ -1.3
XPA-204ENST00000496104 PDE4DQ08499 809 aa6.96□□□□□ -1.3
XPA-204ENST00000496104 DGKZQ13574 1117 aa6.96□□□□□ -1.3
XPA-204ENST00000496104 FAM50AQ14320 339 aaKnown RBP6.96□□□□□ -1.3
XPA-204ENST00000496104 NLRP13Q86W25 1043 aa6.96□□□□□ -1.3
XPA-204ENST00000496104 GPIHBP1Q8IV16 184 aa6.96□□□□□ -1.3
XPA-204ENST00000496104 TMEM88BA6NKF7 163 aa6.95□□□□□ -1.3
XPA-204ENST00000496104 GDF9O60383 454 aa6.95□□□□□ -1.3
XPA-204ENST00000496104 ZPR1O75312 459 aa6.95□□□□□ -1.3
XPA-204ENST00000496104 IL2RBP14784 551 aa6.95□□□□□ -1.3
XPA-204ENST00000496104 TSR1Q2NL82 804 aaKnown RBP6.95□□□□□ -1.3
XPA-204ENST00000496104 ZNF697Q5TEC3 545 aa6.95□□□□□ -1.3
XPA-204ENST00000496104 POGKQ9P215 609 aa6.95□□□□□ -1.3
XPA-204ENST00000496104 C3orf80F5H4A9 247 aa6.94□□□□□ -1.3
XPA-204ENST00000496104 NFKBIEO00221 500 aa6.94□□□□□ -1.3
XPA-204ENST00000496104 PDIA6Q15084 440 aa6.94□□□□□ -1.3
XPA-204ENST00000496104 RGL3Q3MIN7 710 aa6.94□□□□□ -1.3
XPA-204ENST00000496104 FLAD1Q8NFF5 587 aa6.94□□□□□ -1.3
XPA-204ENST00000496104 GCC1Q96CN9 775 aa6.94□□□□□ -1.3
XPA-204ENST00000496104 CDCA7LQ96GN5 454 aa6.94□□□□□ -1.3
XPA-204ENST00000496104 FAM198AQ9UFP1 575 aa6.94□□□□□ -1.3
XPA-204ENST00000496104 DACH1Q9UI36 760 aa6.94□□□□□ -1.3
XPA-204ENST00000496104 DICER1Q9UPY3 1922 aaKnown RBP6.93□□□□□ -1.3
XPA-204ENST00000496104 DLEC1Q9Y238 1755 aa6.93□□□□□ -1.3
XPA-204ENST00000496104 SPDYE16A6NNV3 312 aaPredicted RBP6.93□□□□□ -1.3
XPA-204ENST00000496104 MPNDQ8N594 471 aa6.93□□□□□ -1.3
XPA-204ENST00000496104 KRI1Q8N9T8 703 aaKnown RBP6.93□□□□□ -1.3
XPA-204ENST00000496104 DDX12PQ92771 950 aa6.93□□□□□ -1.3
XPA-204ENST00000496104 TATDN2Q93075 761 aa6.93□□□□□ -1.3
XPA-204ENST00000496104 TRAK1Q9UPV9 953 aa6.93□□□□□ -1.3
XPA-204ENST00000496104 PALLDQ8WX93 1383 aa6.93□□□□□ -1.3
XPA-204ENST00000496104 MUC3AQ02505 3323 aa6.93□□□□□ -1.3
XPA-204ENST00000496104 CENPFP49454 3210 aa6.92□□□□□ -1.3
XPA-204ENST00000496104 DPYSL4O14531 572 aa6.92□□□□□ -1.3
XPA-204ENST00000496104 AOC2O75106 756 aa6.92□□□□□ -1.3
XPA-204ENST00000496104 HMGB1P09429 215 aaKnown RBP6.92□□□□□ -1.3
XPA-204ENST00000496104 CSB-PGBD3P0DP91 1061 aa6.92□□□□□ -1.3
XPA-204ENST00000496104 PDIA4P13667 645 aaKnown RBP6.92□□□□□ -1.3
XPA-204ENST00000496104 CHRNA5P30532 468 aa6.92□□□□□ -1.3
XPA-204ENST00000496104 FMR1Q06787 632 aaKnown RBP eCLIP6.92□□□□□ -1.3
XPA-204ENST00000496104 DEFB115Q30KQ5 88 aa6.92□□□□□ -1.3
XPA-204ENST00000496104 LIAT1Q6ZQX7 453 aa6.92□□□□□ -1.3
XPA-204ENST00000496104 LINC00116Q8NCU8 138 aa6.92□□□□□ -1.3
XPA-204ENST00000496104 SLC17A8Q8NDX2 589 aa6.92□□□□□ -1.3
XPA-204ENST00000496104 SYTL4Q96C24 671 aaPredicted RBP6.92□□□□□ -1.3
XPA-204ENST00000496104 PNMA3Q9UL41 463 aa6.92□□□□□ -1.3
XPA-204ENST00000496104 MAP3K7O43318 606 aa6.91□□□□□ -1.3
XPA-204ENST00000496104 LMNB1P20700 586 aa6.91□□□□□ -1.3
XPA-204ENST00000496104 SSFA2P28290 1259 aa6.91□□□□□ -1.3
XPA-204ENST00000496104 DDX54Q8TDD1 881 aaKnown RBP6.91□□□□□ -1.3
XPA-204ENST00000496104 FAM117AQ9C073 453 aa6.91□□□□□ -1.3
XPA-204ENST00000496104 GMPR2Q9P2T1 348 aaKnown RBP6.91□□□□□ -1.3
XPA-204ENST00000496104 USP47Q96K76 1375 aa6.91□□□□□ -1.3
XPA-204ENST00000496104 LTN1O94822 1766 aa6.9□□□□□ -1.3
XPA-204ENST00000496104 SCN11AQ9UI33 1791 aa6.9□□□□□ -1.3
XPA-204ENST00000496104 NBPF26B4DH59 902 aa6.9□□□□□ -1.3
XPA-204ENST00000496104 PRSS12P56730 875 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms