RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 RRP7AQ9Y3A4 280 aaKnown RBP23.27■■□□□ 1.32
TMEM53-209ENST00000495630 EIF4A1P60842 406 aaKnown RBP23.26■■□□□ 1.31
TMEM53-209ENST00000495630 KIF6Q6ZMV9 814 aa23.26■■□□□ 1.31
TMEM53-209ENST00000495630 TTLL7Q6ZT98 887 aa23.25■■□□□ 1.31
TMEM53-209ENST00000495630 CRAMP1Q96RY5 1269 aa23.25■■□□□ 1.31
TMEM53-209ENST00000495630 SNED1Q8TER0 1413 aa23.25■■□□□ 1.31
TMEM53-209ENST00000495630 SUSD4Q5VX71 490 aa23.24■■□□□ 1.31
TMEM53-209ENST00000495630 RBM17Q96I25 401 aaKnown RBP23.24■■□□□ 1.31
TMEM53-209ENST00000495630 GJA3Q9Y6H8 435 aa23.24■■□□□ 1.31
TMEM53-209ENST00000495630 LMOD1P29536 600 aaPredicted RBP23.23■■□□□ 1.31
TMEM53-209ENST00000495630 MAP2K1Q02750 393 aaPredicted RBP23.23■■□□□ 1.31
TMEM53-209ENST00000495630 ABCC12Q96J65 1359 aa23.23■■□□□ 1.31
TMEM53-209ENST00000495630 MYL6BP14649 208 aa23.22■■□□□ 1.31
TMEM53-209ENST00000495630 GPTP24298 496 aa23.22■■□□□ 1.31
TMEM53-209ENST00000495630 ZNF34Q8IZ26 560 aa23.22■■□□□ 1.31
TMEM53-209ENST00000495630 LARGE2Q8N3Y3 721 aa23.22■■□□□ 1.31
TMEM53-209ENST00000495630 PLEKHF1Q96S99 279 aa23.22■■□□□ 1.31
TMEM53-209ENST00000495630 DDX21Q9NR30 783 aaKnown RBP eCLIP23.22■■□□□ 1.31
TMEM53-209ENST00000495630 IBTKQ9P2D0 1353 aaPredicted RBP23.22■■□□□ 1.31
TMEM53-209ENST00000495630 LBX1P52954 281 aa23.21■■□□□ 1.31
TMEM53-209ENST00000495630 GIGYF2Q6Y7W6 1299 aaKnown RBP23.21■■□□□ 1.31
TMEM53-209ENST00000495630 ZBTB3Q9H5J0 574 aa23.21■■□□□ 1.31
TMEM53-209ENST00000495630 ABT1Q9ULW3 272 aaKnown RBP23.21■■□□□ 1.31
TMEM53-209ENST00000495630 UBN2Q6ZU65 1347 aa23.21■■□□□ 1.31
TMEM53-209ENST00000495630 WDR33Q9C0J8 1336 aaKnown RBP23.21■■□□□ 1.31
TMEM53-209ENST00000495630 RIC1Q4ADV7 1423 aa23.21■■□□□ 1.31
TMEM53-209ENST00000495630 ADAMTSL1Q8N6G6 1762 aa23.2■■□□□ 1.3
TMEM53-209ENST00000495630 NFE2L2Q16236 605 aa23.2■■□□□ 1.3
TMEM53-209ENST00000495630 PPP1R42Q7Z4L9 355 aa23.2■■□□□ 1.3
TMEM53-209ENST00000495630 VPS33BQ9H267 617 aa23.2■■□□□ 1.3
TMEM53-209ENST00000495630 PNNQ9H307 717 aaKnown RBP23.2■■□□□ 1.3
TMEM53-209ENST00000495630 ERBB4Q15303 1308 aa23.19■■□□□ 1.3
TMEM53-209ENST00000495630 EPS15P42566 896 aa23.19■■□□□ 1.3
TMEM53-209ENST00000495630 SCNN1DP51172 638 aa23.19■■□□□ 1.3
TMEM53-209ENST00000495630 PARP10Q53GL7 1025 aa23.19■■□□□ 1.3
TMEM53-209ENST00000495630 USP50Q70EL3 339 aaPredicted RBP23.19■■□□□ 1.3
TMEM53-209ENST00000495630 TMX4Q9H1E5 349 aaPredicted RBP23.19■■□□□ 1.3
TMEM53-209ENST00000495630 PPEF1O14829 653 aaPredicted RBP23.18■■□□□ 1.3
TMEM53-209ENST00000495630 NTSR2O95665 410 aa23.18■■□□□ 1.3
TMEM53-209ENST00000495630 NLRP3Q96P20 1036 aa23.18■■□□□ 1.3
TMEM53-209ENST00000495630 SLC10A5Q5PT55 438 aa23.17■■□□□ 1.3
TMEM53-209ENST00000495630 NIM1KQ8IY84 436 aa23.17■■□□□ 1.3
TMEM53-209ENST00000495630 TCERG1O14776 1098 aaKnown RBP23.16■■□□□ 1.3
TMEM53-209ENST00000495630 HSPA8P11142 646 aaKnown RBP23.16■■□□□ 1.3
TMEM53-209ENST00000495630 THUMPD2Q9BTF0 503 aaKnown RBP23.16■■□□□ 1.3
TMEM53-209ENST00000495630 ECE1P42892 770 aa23.15■■□□□ 1.3
TMEM53-209ENST00000495630 ATP6V0A2Q9Y487 856 aa23.15■■□□□ 1.3
TMEM53-209ENST00000495630 COL4A5P29400 1685 aa23.14■■□□□ 1.29
TMEM53-209ENST00000495630 PPIP5K2O43314 1243 aa23.14■■□□□ 1.29
TMEM53-209ENST00000495630 C3orf67Q6ZVT6 689 aa23.14■■□□□ 1.29
TMEM53-209ENST00000495630 SUPT20HQ8NEM7 779 aa23.14■■□□□ 1.29
TMEM53-209ENST00000495630 UTP14AQ9BVJ6 771 aaKnown RBP23.14■■□□□ 1.29
TMEM53-209ENST00000495630 NUP98P52948 1817 aa23.13■■□□□ 1.29
TMEM53-209ENST00000495630 BBOX1O75936 387 aa23.13■■□□□ 1.29
TMEM53-209ENST00000495630 CST9Q5W186 159 aa23.13■■□□□ 1.29
TMEM53-209ENST00000495630 CAPNS2Q96L46 248 aa23.13■■□□□ 1.29
TMEM53-209ENST00000495630 LAMB4A4D0S4 1761 aa23.12■■□□□ 1.29
TMEM53-209ENST00000495630 FMR1Q06787 632 aaKnown RBP eCLIP23.12■■□□□ 1.29
TMEM53-209ENST00000495630 PDIA6Q15084 440 aa23.12■■□□□ 1.29
TMEM53-209ENST00000495630 LRP10Q7Z4F1 713 aa23.12■■□□□ 1.29
TMEM53-209ENST00000495630 RTFDC1Q9BY42 306 aaPredicted RBP23.12■■□□□ 1.29
TMEM53-209ENST00000495630 ADARB2Q9NS39 739 aaKnown RBP23.12■■□□□ 1.29
TMEM53-209ENST00000495630 GPRC5DQ9NZD1 345 aa23.12■■□□□ 1.29
TMEM53-209ENST00000495630 TSPYL4Q9UJ04 414 aa23.12■■□□□ 1.29
TMEM53-209ENST00000495630 ZNRF3Q9ULT6 936 aa23.12■■□□□ 1.29
TMEM53-209ENST00000495630 MAPK8IP3Q9UPT6 1336 aa23.11■■□□□ 1.29
TMEM53-209ENST00000495630 AOC3Q16853 763 aa23.11■■□□□ 1.29
TMEM53-209ENST00000495630 GPR101Q96P66 508 aaPredicted RBP23.11■■□□□ 1.29
TMEM53-209ENST00000495630 BEGAINQ9BUH8 593 aa23.11■■□□□ 1.29
TMEM53-209ENST00000495630 BABAM1Q9NWV8 329 aa23.11■■□□□ 1.29
TMEM53-209ENST00000495630 EIF2S2P20042 333 aaKnown RBP23.1■■□□□ 1.29
TMEM53-209ENST00000495630 CXCL9Q07325 125 aa23.1■■□□□ 1.29
TMEM53-209ENST00000495630 SLC51AQ86UW1 340 aa23.1■■□□□ 1.29
TMEM53-209ENST00000495630 SP8Q8IXZ3 490 aa23.1■■□□□ 1.29
TMEM53-209ENST00000495630 TLL2Q9Y6L7 1015 aa23.1■■□□□ 1.29
TMEM53-209ENST00000495630 KDM3BQ7LBC6 1761 aa23.09■■□□□ 1.29
TMEM53-209ENST00000495630 TRAF5O00463 557 aa23.09■■□□□ 1.29
TMEM53-209ENST00000495630 PAXIP1Q6ZW49 1069 aaPredicted RBP23.09■■□□□ 1.29
TMEM53-209ENST00000495630 ABHD8Q96I13 439 aa23.09■■□□□ 1.29
TMEM53-209ENST00000495630 MAP2K2P36507 400 aa23.08■■□□□ 1.29
TMEM53-209ENST00000495630 HSP90AB3PQ58FF7 597 aa23.08■■□□□ 1.29
TMEM53-209ENST00000495630 CYP4F22Q6NT55 531 aa23.08■■□□□ 1.29
TMEM53-209ENST00000495630 PGAP2Q9UHJ9 254 aa23.08■■□□□ 1.29
TMEM53-209ENST00000495630 LTBP1Q14766 1721 aa23.08■■□□□ 1.28
TMEM53-209ENST00000495630 DPP8Q6V1X1 898 aaPredicted RBP23.07■■□□□ 1.28
TMEM53-209ENST00000495630 MPNDQ8N594 471 aa23.07■■□□□ 1.28
TMEM53-209ENST00000495630 ABCC4O15439 1325 aa23.07■■□□□ 1.28
TMEM53-209ENST00000495630 RIPK4P57078 832 aa23.06■■□□□ 1.28
TMEM53-209ENST00000495630 GMPSP49915 693 aaPredicted RBP23.05■■□□□ 1.28
TMEM53-209ENST00000495630 KIAA2012Q0VF49 1180 aa23.05■■□□□ 1.28
TMEM53-209ENST00000495630 TNIP1Q15025 636 aa23.05■■□□□ 1.28
TMEM53-209ENST00000495630 CIAPIN1Q6FI81 312 aa23.05■■□□□ 1.28
TMEM53-209ENST00000495630 COPS6Q7L5N1 327 aa23.05■■□□□ 1.28
TMEM53-209ENST00000495630 NLRP10Q86W26 655 aa23.05■■□□□ 1.28
TMEM53-209ENST00000495630 ZC3H15Q8WU90 426 aaKnown RBP23.05■■□□□ 1.28
TMEM53-209ENST00000495630 DLG5Q8TDM6 1919 aa23.04■■□□□ 1.28
TMEM53-209ENST00000495630 GRM1Q13255 1194 aa23.04■■□□□ 1.28
TMEM53-209ENST00000495630 TCIRG1Q13488 830 aa23.04■■□□□ 1.28
TMEM53-209ENST00000495630 PROSER3Q2NL68 480 aa23.04■■□□□ 1.28
TMEM53-209ENST00000495630 DDX46Q7L014 1031 aaKnown RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms