RNA–Protein interactions for RNA: ENST00000494764.1

RAPGEF3-213, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-213ENST00000494764 PNMA8AQ86V59 439 aaPredicted RBP15.33■□□□□ 0.04
RAPGEF3-213ENST00000494764 ZNF34Q8IZ26 560 aa15.33■□□□□ 0.04
RAPGEF3-213ENST00000494764 TNS4Q8IZW8 715 aa15.33■□□□□ 0.04
RAPGEF3-213ENST00000494764 PSMD1Q99460 953 aa15.33■□□□□ 0.04
RAPGEF3-213ENST00000494764 TMX4Q9H1E5 349 aaPredicted RBP15.33■□□□□ 0.04
RAPGEF3-213ENST00000494764 ZNF541Q9H0D2 1346 aa15.33■□□□□ 0.04
RAPGEF3-213ENST00000494764 TCERG1O14776 1098 aaKnown RBP15.32■□□□□ 0.04
RAPGEF3-213ENST00000494764 EPHX2P34913 555 aa15.32■□□□□ 0.04
RAPGEF3-213ENST00000494764 EIF6P56537 245 aaKnown RBP15.32■□□□□ 0.04
RAPGEF3-213ENST00000494764 RALBP1Q15311 655 aa15.32■□□□□ 0.04
RAPGEF3-213ENST00000494764 NLRP3Q96P20 1036 aa15.32■□□□□ 0.04
RAPGEF3-213ENST00000494764 ERBB4Q15303 1308 aa15.32■□□□□ 0.04
RAPGEF3-213ENST00000494764 PARP10Q53GL7 1025 aa15.31■□□□□ 0.04
RAPGEF3-213ENST00000494764 GPC2Q8N158 579 aa15.31■□□□□ 0.04
RAPGEF3-213ENST00000494764 CRAMP1Q96RY5 1269 aa15.31■□□□□ 0.04
RAPGEF3-213ENST00000494764 BABAM1Q9NWV8 329 aa15.31■□□□□ 0.04
RAPGEF3-213ENST00000494764 GJA3Q9Y6H8 435 aa15.31■□□□□ 0.04
RAPGEF3-213ENST00000494764 UBN2Q6ZU65 1347 aa15.31■□□□□ 0.04
RAPGEF3-213ENST00000494764 ABCC12Q96J65 1359 aa15.31■□□□□ 0.04
RAPGEF3-213ENST00000494764 TMEM88BA6NKF7 163 aa15.3■□□□□ 0.04
RAPGEF3-213ENST00000494764 ITGBL1O95965 494 aaPredicted RBP15.3■□□□□ 0.04
RAPGEF3-213ENST00000494764 PASKQ96RG2 1323 aa15.3■□□□□ 0.04
RAPGEF3-213ENST00000494764 RNF123Q5XPI4 1314 aa15.29■□□□□ 0.04
RAPGEF3-213ENST00000494764 CAPN15O75808 1086 aa15.29■□□□□ 0.04
RAPGEF3-213ENST00000494764 NTSR2O95665 410 aa15.29■□□□□ 0.04
RAPGEF3-213ENST00000494764 TMPOP42166 694 aaKnown RBP15.29■□□□□ 0.04
RAPGEF3-213ENST00000494764 LMOD3Q0VAK6 560 aa15.29■□□□□ 0.04
RAPGEF3-213ENST00000494764 PDIA6Q15084 440 aa15.29■□□□□ 0.04
RAPGEF3-213ENST00000494764 CNTROBQ8N137 903 aa15.29■□□□□ 0.04
RAPGEF3-213ENST00000494764 LARGE2Q8N3Y3 721 aa15.29■□□□□ 0.04
RAPGEF3-213ENST00000494764 UTP14AQ9BVJ6 771 aaKnown RBP15.29■□□□□ 0.04
RAPGEF3-213ENST00000494764 IBTKQ9P2D0 1353 aaPredicted RBP15.28■□□□□ 0.04
RAPGEF3-213ENST00000494764 PPEF1O14829 653 aaPredicted RBP15.28■□□□□ 0.04
RAPGEF3-213ENST00000494764 LMOD1P29536 600 aaPredicted RBP15.28■□□□□ 0.04
RAPGEF3-213ENST00000494764 AIMP1Q12904 312 aaKnown RBP15.28■□□□□ 0.04
RAPGEF3-213ENST00000494764 NEUROD2Q15784 382 aa15.28■□□□□ 0.04
RAPGEF3-213ENST00000494764 SLC10A5Q5PT55 438 aa15.28■□□□□ 0.04
RAPGEF3-213ENST00000494764 NECTIN2Q92692 538 aa15.28■□□□□ 0.04
RAPGEF3-213ENST00000494764 ANXA1P04083 346 aa15.27■□□□□ 0.04
RAPGEF3-213ENST00000494764 HSP90AB3PQ58FF7 597 aa15.27■□□□□ 0.04
RAPGEF3-213ENST00000494764 MAP1SQ66K74 1059 aaPredicted RBP15.27■□□□□ 0.04
RAPGEF3-213ENST00000494764 COPS6Q7L5N1 327 aa15.27■□□□□ 0.04
RAPGEF3-213ENST00000494764 RIC1Q4ADV7 1423 aa15.26■□□□□ 0.03
RAPGEF3-213ENST00000494764 CNTNAP1P78357 1384 aa15.26■□□□□ 0.03
RAPGEF3-213ENST00000494764 C3orf67Q6ZVT6 689 aa15.26■□□□□ 0.03
RAPGEF3-213ENST00000494764 LRP10Q7Z4F1 713 aa15.26■□□□□ 0.03
RAPGEF3-213ENST00000494764 VPS33BQ9H267 617 aa15.26■□□□□ 0.03
RAPGEF3-213ENST00000494764 LAS1LQ9Y4W2 734 aaKnown RBP15.26■□□□□ 0.03
RAPGEF3-213ENST00000494764 BBOX1O75936 387 aa15.25■□□□□ 0.03
RAPGEF3-213ENST00000494764 VEGFBP49765 207 aa15.25■□□□□ 0.03
RAPGEF3-213ENST00000494764 DDX10Q13206 875 aaKnown RBP15.25■□□□□ 0.03
RAPGEF3-213ENST00000494764 PROSER3Q2NL68 480 aa15.25■□□□□ 0.03
RAPGEF3-213ENST00000494764 DEFB115Q30KQ5 88 aa15.25■□□□□ 0.03
RAPGEF3-213ENST00000494764 NIM1KQ8IY84 436 aa15.25■□□□□ 0.03
RAPGEF3-213ENST00000494764 SUPT20HQ8NEM7 779 aa15.25■□□□□ 0.03
RAPGEF3-213ENST00000494764 ATP6V0A2Q9Y487 856 aa15.25■□□□□ 0.03
RAPGEF3-213ENST00000494764 PPIP5K2O43314 1243 aa15.24■□□□□ 0.03
RAPGEF3-213ENST00000494764 CCDC146Q8IYE0 955 aa15.24■□□□□ 0.03
RAPGEF3-213ENST00000494764 XAGE3Q8WTP9 111 aa15.24■□□□□ 0.03
RAPGEF3-213ENST00000494764 TRMT112Q9UI30 125 aaKnown RBP15.24■□□□□ 0.03
RAPGEF3-213ENST00000494764 SNED1Q8TER0 1413 aa15.24■□□□□ 0.03
RAPGEF3-213ENST00000494764 CHL1O00533 1208 aa15.23■□□□□ 0.03
RAPGEF3-213ENST00000494764 HCLS1P14317 486 aaPredicted RBP15.23■□□□□ 0.03
RAPGEF3-213ENST00000494764 EPS15P42566 896 aa15.23■□□□□ 0.03
RAPGEF3-213ENST00000494764 TCIRG1Q13488 830 aa15.23■□□□□ 0.03
RAPGEF3-213ENST00000494764 WDR43Q15061 677 aaKnown RBP eCLIP15.23■□□□□ 0.03
RAPGEF3-213ENST00000494764 DDX46Q7L014 1031 aaKnown RBP15.23■□□□□ 0.03
RAPGEF3-213ENST00000494764 NLRP10Q86W26 655 aa15.23■□□□□ 0.03
RAPGEF3-213ENST00000494764 SP8Q8IXZ3 490 aa15.23■□□□□ 0.03
RAPGEF3-213ENST00000494764 AIDAQ96BJ3 306 aa15.23■□□□□ 0.03
RAPGEF3-213ENST00000494764 DDX21Q9NR30 783 aaKnown RBP eCLIP15.23■□□□□ 0.03
RAPGEF3-213ENST00000494764 MYBBP1AQ9BQG0 1328 aaKnown RBP15.22■□□□□ 0.03
RAPGEF3-213ENST00000494764 FOXN1O15353 648 aa15.22■□□□□ 0.03
RAPGEF3-213ENST00000494764 AOC3Q16853 763 aa15.22■□□□□ 0.03
RAPGEF3-213ENST00000494764 DPP8Q6V1X1 898 aaPredicted RBP15.22■□□□□ 0.03
RAPGEF3-213ENST00000494764 USP50Q70EL3 339 aaPredicted RBP15.22■□□□□ 0.03
RAPGEF3-213ENST00000494764 SLC51AQ86UW1 340 aa15.22■□□□□ 0.03
RAPGEF3-213ENST00000494764 MPNDQ8N594 471 aa15.22■□□□□ 0.03
RAPGEF3-213ENST00000494764 RUNDC1Q96C34 613 aa15.22■□□□□ 0.03
RAPGEF3-213ENST00000494764 ABT1Q9ULW3 272 aaKnown RBP15.22■□□□□ 0.03
RAPGEF3-213ENST00000494764 ABCC4O15439 1325 aa15.21■□□□□ 0.03
RAPGEF3-213ENST00000494764 SCNN1DP51172 638 aa15.21■□□□□ 0.03
RAPGEF3-213ENST00000494764 ZNRF3Q9ULT6 936 aa15.21■□□□□ 0.03
RAPGEF3-213ENST00000494764 ADAMTSL1Q8N6G6 1762 aa15.21■□□□□ 0.02
RAPGEF3-213ENST00000494764 SH3TC1Q8TE82 1336 aa15.2■□□□□ 0.02
RAPGEF3-213ENST00000494764 COL4A5P29400 1685 aa15.2■□□□□ 0.02
RAPGEF3-213ENST00000494764 RASSF10A6NK89 507 aa15.2■□□□□ 0.02
RAPGEF3-213ENST00000494764 CTCFP49711 727 aaPredicted RBP15.2■□□□□ 0.02
RAPGEF3-213ENST00000494764 KRT24Q2M2I5 525 aa15.2■□□□□ 0.02
RAPGEF3-213ENST00000494764 RTFDC1Q9BY42 306 aaPredicted RBP15.2■□□□□ 0.02
RAPGEF3-213ENST00000494764 TRIM35Q9UPQ4 493 aa15.2■□□□□ 0.02
RAPGEF3-213ENST00000494764 CXCL9Q07325 125 aa15.19■□□□□ 0.02
RAPGEF3-213ENST00000494764 GRAPQ13588 217 aa15.19■□□□□ 0.02
RAPGEF3-213ENST00000494764 HDGFL1Q5TGJ6 251 aa15.19■□□□□ 0.02
RAPGEF3-213ENST00000494764 ANKRD13DQ6ZTN6 518 aa15.19■□□□□ 0.02
RAPGEF3-213ENST00000494764 GRAPLQ8TC17 118 aaPredicted RBP15.19■□□□□ 0.02
RAPGEF3-213ENST00000494764 PRDM10Q9NQV6 1147 aa15.19■□□□□ 0.02
RAPGEF3-213ENST00000494764 ADARB2Q9NS39 739 aaKnown RBP15.19■□□□□ 0.02
RAPGEF3-213ENST00000494764 CHPF2Q9P2E5 772 aa15.19■□□□□ 0.02
RAPGEF3-213ENST00000494764 ADAMTS8Q9UP79 889 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms