RNA–Protein interactions for RNA: ENST00000494424.1

TSPAN6-202, Transcript of tetraspanin 6, humanhuman

TSL 2

Gene TSPAN6, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-202ENST00000494424 MPRIPQ6WCQ1 1025 aa9.17□□□□□ -0.94
TSPAN6-202ENST00000494424 ANKRD13DQ6ZTN6 518 aa9.17□□□□□ -0.94
TSPAN6-202ENST00000494424 DICER1Q9UPY3 1922 aaKnown RBP9.17□□□□□ -0.94
TSPAN6-202ENST00000494424 SMG6Q86US8 1419 aaKnown RBP9.16□□□□□ -0.94
TSPAN6-202ENST00000494424 CGNL1Q0VF96 1302 aa9.16□□□□□ -0.94
TSPAN6-202ENST00000494424 TTC21BQ7Z4L5 1316 aa9.16□□□□□ -0.94
TSPAN6-202ENST00000494424 LTBP3Q9NS15 1303 aa9.16□□□□□ -0.94
TSPAN6-202ENST00000494424 EPHX2P34913 555 aa9.16□□□□□ -0.94
TSPAN6-202ENST00000494424 RFC4P35249 363 aa9.16□□□□□ -0.94
TSPAN6-202ENST00000494424 ITGAEP38570 1179 aa9.16□□□□□ -0.94
TSPAN6-202ENST00000494424 MLLT3P42568 568 aaPredicted RBP9.16□□□□□ -0.94
TSPAN6-202ENST00000494424 SRPK2P78362 688 aaKnown RBP9.16□□□□□ -0.94
TSPAN6-202ENST00000494424 AKAP4Q5JQC9 854 aa9.16□□□□□ -0.94
TSPAN6-202ENST00000494424 INSRP06213 1382 aa9.15□□□□□ -0.94
TSPAN6-202ENST00000494424 COL6A3P12111 3177 aa9.15□□□□□ -0.94
TSPAN6-202ENST00000494424 NOGQ13253 232 aa9.15□□□□□ -0.94
TSPAN6-202ENST00000494424 ADGRD1Q6QNK2 874 aa9.15□□□□□ -0.94
TSPAN6-202ENST00000494424 CABP1Q9NZU7 370 aa9.15□□□□□ -0.94
TSPAN6-202ENST00000494424 SAPCD2Q86UD0 394 aa9.14□□□□□ -0.95
TSPAN6-202ENST00000494424 ZBED2Q9BTP6 218 aa9.14□□□□□ -0.95
TSPAN6-202ENST00000494424 COL25A1Q9BXS0 654 aaPredicted RBP9.14□□□□□ -0.95
TSPAN6-202ENST00000494424 PRDM6Q9NQX0 595 aa9.14□□□□□ -0.95
TSPAN6-202ENST00000494424 FAM208AQ9UK61 1670 aaKnown RBP9.13□□□□□ -0.95
TSPAN6-202ENST00000494424 ATP6V1AP38606 617 aa9.13□□□□□ -0.95
TSPAN6-202ENST00000494424 ITPK1Q13572 414 aa9.13□□□□□ -0.95
TSPAN6-202ENST00000494424 RC3H1Q5TC82 1133 aaKnown RBP9.13□□□□□ -0.95
TSPAN6-202ENST00000494424 DMRTA1Q5VZB9 504 aa9.13□□□□□ -0.95
TSPAN6-202ENST00000494424 CST9Q5W186 159 aa9.13□□□□□ -0.95
TSPAN6-202ENST00000494424 STAC3Q96MF2 364 aa9.13□□□□□ -0.95
TSPAN6-202ENST00000494424 RBM27Q9P2N5 1060 aaKnown RBP9.13□□□□□ -0.95
TSPAN6-202ENST00000494424 DDR1Q08345 913 aa9.12□□□□□ -0.95
TSPAN6-202ENST00000494424 TSR1Q2NL82 804 aaKnown RBP9.12□□□□□ -0.95
TSPAN6-202ENST00000494424 NBPF3Q9H094 633 aa9.12□□□□□ -0.95
TSPAN6-202ENST00000494424 TAOK3Q9H2K8 898 aa9.12□□□□□ -0.95
TSPAN6-202ENST00000494424 VPS9D1Q9Y2B5 631 aa9.12□□□□□ -0.95
TSPAN6-202ENST00000494424 MAP2P11137 1827 aaKnown RBP9.12□□□□□ -0.95
TSPAN6-202ENST00000494424 RPS6KA4O75676 772 aa9.11□□□□□ -0.95
TSPAN6-202ENST00000494424 SPNS2Q8IVW8 549 aa9.11□□□□□ -0.95
TSPAN6-202ENST00000494424 USP31Q70CQ4 1352 aa9.11□□□□□ -0.95
TSPAN6-202ENST00000494424 MAP3K19Q56UN5 1328 aa9.1□□□□□ -0.95
TSPAN6-202ENST00000494424 PCDH11XQ9BZA7 1347 aa9.1□□□□□ -0.95
TSPAN6-202ENST00000494424 PCDH11YQ9BZA8 1340 aa9.1□□□□□ -0.95
TSPAN6-202ENST00000494424 POLRMTO00411 1230 aaKnown RBP9.1□□□□□ -0.95
TSPAN6-202ENST00000494424 COL9A1P20849 921 aa9.1□□□□□ -0.95
TSPAN6-202ENST00000494424 PIGBQ92521 554 aa9.1□□□□□ -0.95
TSPAN6-202ENST00000494424 IP6K1Q92551 441 aa9.1□□□□□ -0.95
TSPAN6-202ENST00000494424 RABGEF1Q9UJ41 708 aa9.1□□□□□ -0.95
TSPAN6-202ENST00000494424 CEP290O15078 2479 aa9.1□□□□□ -0.95
TSPAN6-202ENST00000494424 CD163L1Q9NR16 1453 aa9.09□□□□□ -0.95
TSPAN6-202ENST00000494424 TRPM7Q96QT4 1865 aa9.09□□□□□ -0.95
TSPAN6-202ENST00000494424 H0YIN7 160 aa9.09□□□□□ -0.95
TSPAN6-202ENST00000494424 PDZRN3Q9UPQ7 1066 aa9.09□□□□□ -0.95
TSPAN6-202ENST00000494424 MKI67P46013 3256 aaKnown RBP9.09□□□□□ -0.95
TSPAN6-202ENST00000494424 CNTNAP4Q9C0A0 1308 aa9.08□□□□□ -0.96
TSPAN6-202ENST00000494424 TRIM6-TRIM34B2RNG4 842 aa9.08□□□□□ -0.96
TSPAN6-202ENST00000494424 HRO43593 1189 aa9.08□□□□□ -0.96
TSPAN6-202ENST00000494424 TM4SF1P30408 202 aa9.08□□□□□ -0.96
TSPAN6-202ENST00000494424 SOGA3Q5TF21 947 aa9.08□□□□□ -0.96
TSPAN6-202ENST00000494424 INTS3Q68E01 1043 aaKnown RBP9.08□□□□□ -0.96
TSPAN6-202ENST00000494424 FBXO46Q6PJ61 603 aaPredicted RBP9.08□□□□□ -0.96
TSPAN6-202ENST00000494424 PACS2Q86VP3 889 aa9.08□□□□□ -0.96
TSPAN6-202ENST00000494424 RAPGEF4Q8WZA2 1011 aa9.08□□□□□ -0.96
TSPAN6-202ENST00000494424 DLEC1Q9Y238 1755 aa9.08□□□□□ -0.96
TSPAN6-202ENST00000494424 FER1L6Q2WGJ9 1857 aa9.08□□□□□ -0.96
TSPAN6-202ENST00000494424 C21orf2O43822 256 aa9.07□□□□□ -0.96
TSPAN6-202ENST00000494424 TRPA1O75762 1119 aa9.07□□□□□ -0.96
TSPAN6-202ENST00000494424 PLA2G5P39877 138 aa9.07□□□□□ -0.96
TSPAN6-202ENST00000494424 PRSS12P56730 875 aa9.07□□□□□ -0.96
TSPAN6-202ENST00000494424 FMR1Q06787 632 aaKnown RBP eCLIP9.07□□□□□ -0.96
TSPAN6-202ENST00000494424 C2CD5Q86YS7 1000 aa9.07□□□□□ -0.96
TSPAN6-202ENST00000494424 LTV1Q96GA3 475 aaPredicted RBP9.07□□□□□ -0.96
TSPAN6-202ENST00000494424 RNF186Q9NXI6 227 aa9.07□□□□□ -0.96
TSPAN6-202ENST00000494424 LTN1O94822 1766 aa9.07□□□□□ -0.96
TSPAN6-202ENST00000494424 RNF123Q5XPI4 1314 aa9.06□□□□□ -0.96
TSPAN6-202ENST00000494424 USP42Q9H9J4 1324 aaKnown RBP9.06□□□□□ -0.96
TSPAN6-202ENST00000494424 TRAF5O00463 557 aa9.06□□□□□ -0.96
TSPAN6-202ENST00000494424 CDCA7LQ96GN5 454 aa9.06□□□□□ -0.96
TSPAN6-202ENST00000494424 HDAC9Q9UKV0 1011 aa9.06□□□□□ -0.96
TSPAN6-202ENST00000494424 CELF2O95319 508 aaKnown RBP9.05□□□□□ -0.96
TSPAN6-202ENST00000494424 TATP17735 454 aaPredicted RBP9.05□□□□□ -0.96
TSPAN6-202ENST00000494424 PTGDRQ13258 359 aa9.05□□□□□ -0.96
TSPAN6-202ENST00000494424 BICDL1Q6ZP65 573 aa9.05□□□□□ -0.96
TSPAN6-202ENST00000494424 LAPTM4BQ86VI4 370 aa9.05□□□□□ -0.96
TSPAN6-202ENST00000494424 GPC2Q8N158 579 aa9.05□□□□□ -0.96
TSPAN6-202ENST00000494424 MRPL50Q8N5N7 158 aaKnown RBP9.05□□□□□ -0.96
TSPAN6-202ENST00000494424 ZIC5Q96T25 663 aa9.05□□□□□ -0.96
TSPAN6-202ENST00000494424 CDHR5Q9HBB8 845 aa9.05□□□□□ -0.96
TSPAN6-202ENST00000494424 ZNF541Q9H0D2 1346 aa9.05□□□□□ -0.96
TSPAN6-202ENST00000494424 CACNA1AO00555 2505 aa9.04□□□□□ -0.96
TSPAN6-202ENST00000494424 ITGB4P16144 1822 aa9.04□□□□□ -0.96
TSPAN6-202ENST00000494424 BHMG1C9JSJ3 638 aaPredicted RBP9.04□□□□□ -0.96
TSPAN6-202ENST00000494424 LMOD1P29536 600 aaPredicted RBP9.04□□□□□ -0.96
TSPAN6-202ENST00000494424 PROX2Q3B8N5 592 aa9.04□□□□□ -0.96
TSPAN6-202ENST00000494424 USP50Q70EL3 339 aaPredicted RBP9.04□□□□□ -0.96
TSPAN6-202ENST00000494424 FAM122AQ96E09 287 aa9.04□□□□□ -0.96
TSPAN6-202ENST00000494424 TMOD3Q9NYL9 352 aa9.04□□□□□ -0.96
TSPAN6-202ENST00000494424 ASAP1Q9ULH1 1129 aa9.04□□□□□ -0.96
TSPAN6-202ENST00000494424 KDRP35968 1356 aa9.03□□□□□ -0.96
TSPAN6-202ENST00000494424 NBPF26B4DH59 902 aa9.03□□□□□ -0.96
TSPAN6-202ENST00000494424 CYP27B1O15528 508 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms