RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 SAP130Q9H0E3 1048 aa8.83□□□□□ -1
SNX13-210ENST00000494402 STRIP2Q9ULQ0 834 aa8.83□□□□□ -1
SNX13-210ENST00000494402 ESYT3A0FGR9 886 aa8.82□□□□□ -1
SNX13-210ENST00000494402 LDHAP00338 332 aaKnown RBP8.82□□□□□ -1
SNX13-210ENST00000494402 KRT18P05783 430 aaKnown RBP8.82□□□□□ -1
SNX13-210ENST00000494402 TAF1CQ15572 869 aaPredicted RBP8.82□□□□□ -1
SNX13-210ENST00000494402 ZRSR2Q15696 482 aaKnown RBP8.82□□□□□ -1
SNX13-210ENST00000494402 WDR78Q5VTH9 848 aa8.82□□□□□ -1
SNX13-210ENST00000494402 C16orf86Q6ZW13 317 aa8.82□□□□□ -1
SNX13-210ENST00000494402 ZBTB33Q86T24 672 aa8.82□□□□□ -1
SNX13-210ENST00000494402 LAPTM4BQ86VI4 370 aa8.82□□□□□ -1
SNX13-210ENST00000494402 GJD3Q8N144 294 aa8.82□□□□□ -1
SNX13-210ENST00000494402 SAMD3Q8N6K7 520 aa8.82□□□□□ -1
SNX13-210ENST00000494402 SCG3Q8WXD2 468 aaKnown RBP8.82□□□□□ -1
SNX13-210ENST00000494402 NAP1L5Q96NT1 182 aaPredicted RBP8.82□□□□□ -1
SNX13-210ENST00000494402 R3HCC1Q9Y3T6 440 aaKnown RBP8.82□□□□□ -1
SNX13-210ENST00000494402 ETFBP38117 255 aa8.81□□□□□ -1
SNX13-210ENST00000494402 NASPP49321 788 aaPredicted RBP8.81□□□□□ -1
SNX13-210ENST00000494402 LSM11P83369 360 aaKnown RBP eCLIP8.81□□□□□ -1
SNX13-210ENST00000494402 VPS72Q15906 364 aa8.81□□□□□ -1
SNX13-210ENST00000494402 ERMP1Q7Z2K6 904 aa8.81□□□□□ -1
SNX13-210ENST00000494402 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.81□□□□□ -1
SNX13-210ENST00000494402 TSR2Q969E8 191 aaKnown RBP8.81□□□□□ -1
SNX13-210ENST00000494402 MPHOSPH6Q99547 160 aaKnown RBP8.81□□□□□ -1
SNX13-210ENST00000494402 KANSL2Q9H9L4 492 aa8.81□□□□□ -1
SNX13-210ENST00000494402 CNTN3Q9P232 1028 aa8.81□□□□□ -1
SNX13-210ENST00000494402 SFMBT1Q9UHJ3 866 aa8.81□□□□□ -1
SNX13-210ENST00000494402 RPS6KL1Q9Y6S9 549 aa8.81□□□□□ -1
SNX13-210ENST00000494402 BHMG1C9JSJ3 638 aaPredicted RBP8.8□□□□□ -1
SNX13-210ENST00000494402 RGS20O76081 388 aa8.8□□□□□ -1
SNX13-210ENST00000494402 KIF4AO95239 1232 aa8.8□□□□□ -1
SNX13-210ENST00000494402 ST13P50502 369 aaKnown RBP8.8□□□□□ -1
SNX13-210ENST00000494402 BRD3Q15059 726 aa8.8□□□□□ -1
SNX13-210ENST00000494402 MORN1Q5T089 497 aa8.8□□□□□ -1
SNX13-210ENST00000494402 KRT26Q7Z3Y9 468 aa8.8□□□□□ -1
SNX13-210ENST00000494402 PGBD3Q8N328 593 aa8.8□□□□□ -1
SNX13-210ENST00000494402 USB1Q9BQ65 265 aaKnown RBP8.8□□□□□ -1
SNX13-210ENST00000494402 ZNF358Q9NW07 568 aa8.8□□□□□ -1
SNX13-210ENST00000494402 TMEM260Q9NX78 707 aa8.8□□□□□ -1
SNX13-210ENST00000494402 SWAP70Q9UH65 585 aa8.8□□□□□ -1
SNX13-210ENST00000494402 SLC27A5Q9Y2P5 690 aa8.8□□□□□ -1
SNX13-210ENST00000494402 CCDC85CA6NKD9 419 aa8.79□□□□□ -1
SNX13-210ENST00000494402 GIPC1O14908 333 aa8.79□□□□□ -1
SNX13-210ENST00000494402 IFRD2Q12894 506 aaPredicted RBP8.79□□□□□ -1
SNX13-210ENST00000494402 PPP2R5AQ15172 486 aa8.79□□□□□ -1
SNX13-210ENST00000494402 NBPF20Q3BBV1 942 aa8.79□□□□□ -1
SNX13-210ENST00000494402 ADGRD1Q6QNK2 874 aa8.79□□□□□ -1
SNX13-210ENST00000494402 AMOTL1Q8IY63 956 aa8.79□□□□□ -1
SNX13-210ENST00000494402 LILRB2Q8N423 598 aa8.79□□□□□ -1
SNX13-210ENST00000494402 HNRNPLLQ8WVV9 542 aaKnown RBP8.79□□□□□ -1
SNX13-210ENST00000494402 SPON2Q9BUD6 331 aa8.79□□□□□ -1
SNX13-210ENST00000494402 FBXO9Q9UK97 447 aaPredicted RBP8.79□□□□□ -1
SNX13-210ENST00000494402 POLIQ9UNA4 740 aa8.79□□□□□ -1
SNX13-210ENST00000494402 MRVI1Q9Y6F6 885 aa8.79□□□□□ -1
SNX13-210ENST00000494402 ATAD2Q6PL18 1390 aa8.78□□□□□ -1
SNX13-210ENST00000494402 IFRD1O00458 451 aaPredicted RBP8.78□□□□□ -1
SNX13-210ENST00000494402 HSP90AA1P07900 732 aaKnown RBP8.78□□□□□ -1
SNX13-210ENST00000494402 LIG1P18858 919 aa8.78□□□□□ -1
SNX13-210ENST00000494402 EPHB1P54762 984 aa8.78□□□□□ -1
SNX13-210ENST00000494402 PPP4CP60510 307 aa8.78□□□□□ -1
SNX13-210ENST00000494402 HLTFQ14527 1009 aaKnown RBP eCLIP8.78□□□□□ -1
SNX13-210ENST00000494402 KMT5BQ4FZB7 885 aa8.78□□□□□ -1
SNX13-210ENST00000494402 BRDTQ58F21 947 aaPredicted RBP8.78□□□□□ -1
SNX13-210ENST00000494402 KIAA0825Q8IV33 1275 aa8.78□□□□□ -1
SNX13-210ENST00000494402 MRPL50Q8N5N7 158 aaKnown RBP8.78□□□□□ -1
SNX13-210ENST00000494402 DNAJC7Q99615 494 aa8.78□□□□□ -1
SNX13-210ENST00000494402 CCDC113Q9H0I3 377 aa8.78□□□□□ -1
SNX13-210ENST00000494402 JADE2Q9NQC1 790 aa8.78□□□□□ -1
SNX13-210ENST00000494402 EXOC5O00471 708 aa8.77□□□□□ -1.01
SNX13-210ENST00000494402 TSPAN6O43657 245 aa8.77□□□□□ -1.01
SNX13-210ENST00000494402 MYL1P05976 194 aa8.77□□□□□ -1.01
SNX13-210ENST00000494402 JUNDP17535 347 aa8.77□□□□□ -1.01
SNX13-210ENST00000494402 BDNFP23560 247 aa8.77□□□□□ -1.01
SNX13-210ENST00000494402 POU5F1BQ06416 359 aa8.77□□□□□ -1.01
SNX13-210ENST00000494402 NFE2Q16621 373 aaPredicted RBP8.77□□□□□ -1.01
SNX13-210ENST00000494402 PPP4R4Q6NUP7 873 aa8.77□□□□□ -1.01
SNX13-210ENST00000494402 RAVER1Q8IY67 606 aaKnown RBP8.77□□□□□ -1.01
SNX13-210ENST00000494402 DNAJC25Q9H1X3 360 aa8.77□□□□□ -1.01
SNX13-210ENST00000494402 EIF1AYO14602 144 aaKnown RBP8.76□□□□□ -1.01
SNX13-210ENST00000494402 CNGA1P29973 690 aa8.76□□□□□ -1.01
SNX13-210ENST00000494402 CDKN1CP49918 316 aaPredicted RBP8.76□□□□□ -1.01
SNX13-210ENST00000494402 COX20Q5RI15 118 aa8.76□□□□□ -1.01
SNX13-210ENST00000494402 MEI1Q5TIA1 1274 aa8.76□□□□□ -1.01
SNX13-210ENST00000494402 SAMD7Q7Z3H4 446 aa8.76□□□□□ -1.01
SNX13-210ENST00000494402 NKX2-3Q8TAU0 364 aa8.76□□□□□ -1.01
SNX13-210ENST00000494402 CHMP7Q8WUX9 453 aaPredicted RBP8.76□□□□□ -1.01
SNX13-210ENST00000494402 ZFRQ96KR1 1074 aaKnown RBP8.76□□□□□ -1.01
SNX13-210ENST00000494402 STAC3Q96MF2 364 aa8.76□□□□□ -1.01
SNX13-210ENST00000494402 ARNT2Q9HBZ2 717 aa8.76□□□□□ -1.01
SNX13-210ENST00000494402 COPRSQ9NQ92 184 aa8.76□□□□□ -1.01
SNX13-210ENST00000494402 PRKAG3Q9UGI9 489 aa8.76□□□□□ -1.01
SNX13-210ENST00000494402 EFR3BQ9Y2G0 817 aa8.76□□□□□ -1.01
SNX13-210ENST00000494402 ATP8A1Q9Y2Q0 1164 aa8.76□□□□□ -1.01
SNX13-210ENST00000494402 PCDHB11Q9Y5F2 797 aa8.76□□□□□ -1.01
SNX13-210ENST00000494402 SYCP2LQ5T4T6 812 aa8.75□□□□□ -1.01
SNX13-210ENST00000494402 ANKRD13DQ6ZTN6 518 aa8.75□□□□□ -1.01
SNX13-210ENST00000494402 PCGF5Q86SE9 256 aa8.75□□□□□ -1.01
SNX13-210ENST00000494402 PPM1EQ8WY54 764 aa8.75□□□□□ -1.01
SNX13-210ENST00000494402 SLC39A13Q96H72 371 aa8.75□□□□□ -1.01
SNX13-210ENST00000494402 ALG1L2C9J202 215 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms