RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 NCOA7Q8NI08 942 aa13.61□□□□□ -0.23
COL25A1-204ENST00000494183 TBC1D32Q96NH3 1257 aa13.61□□□□□ -0.23
COL25A1-204ENST00000494183 CFAP100Q494V2 611 aa13.61□□□□□ -0.23
COL25A1-204ENST00000494183 HSP90B2PQ58FF3 399 aa13.61□□□□□ -0.23
COL25A1-204ENST00000494183 LRRC2Q9BYS8 371 aa13.61□□□□□ -0.23
COL25A1-204ENST00000494183 SLC9C2Q5TAH2 1124 aa13.6□□□□□ -0.23
COL25A1-204ENST00000494183 TNPO1Q92973 898 aaKnown RBP13.6□□□□□ -0.23
COL25A1-204ENST00000494183 ATP10AO60312 1499 aa13.6□□□□□ -0.23
COL25A1-204ENST00000494183 TRPM2O94759 1503 aa13.6□□□□□ -0.23
COL25A1-204ENST00000494183 CYP7A1P22680 504 aa13.6□□□□□ -0.23
COL25A1-204ENST00000494183 GJB2P29033 226 aa13.6□□□□□ -0.23
COL25A1-204ENST00000494183 TPTE2Q6XPS3 522 aa13.6□□□□□ -0.23
COL25A1-204ENST00000494183 DDX21Q9NR30 783 aaKnown RBP eCLIP13.6□□□□□ -0.23
COL25A1-204ENST00000494183 HMG20BQ9P0W2 317 aa13.6□□□□□ -0.23
COL25A1-204ENST00000494183 PIK3C2GO75747 1445 aa13.6□□□□□ -0.23
COL25A1-204ENST00000494183 STX6O43752 255 aa13.59□□□□□ -0.23
COL25A1-204ENST00000494183 ZFYP08048 801 aaPredicted RBP13.59□□□□□ -0.23
COL25A1-204ENST00000494183 FEZ1Q99689 392 aa13.59□□□□□ -0.23
COL25A1-204ENST00000494183 UTP14AQ9BVJ6 771 aaKnown RBP13.59□□□□□ -0.23
COL25A1-204ENST00000494183 LMTK3Q96Q04 1460 aa13.59□□□□□ -0.23
COL25A1-204ENST00000494183 CCP110O43303 1012 aa13.59□□□□□ -0.23
COL25A1-204ENST00000494183 CBFA2T2O43439 604 aa13.59□□□□□ -0.23
COL25A1-204ENST00000494183 IL13P35225 146 aa13.59□□□□□ -0.23
COL25A1-204ENST00000494183 CEP85Q6P2H3 762 aa13.59□□□□□ -0.23
COL25A1-204ENST00000494183 G2E3Q7L622 706 aa13.59□□□□□ -0.23
COL25A1-204ENST00000494183 DDX17Q92841 729 aaKnown RBP13.59□□□□□ -0.23
COL25A1-204ENST00000494183 DCTPP1Q9H773 170 aa13.59□□□□□ -0.23
COL25A1-204ENST00000494183 RTCBQ9Y3I0 505 aaKnown RBP13.59□□□□□ -0.23
COL25A1-204ENST00000494183 TTLL12Q14166 644 aaPredicted RBP13.59□□□□□ -0.23
COL25A1-204ENST00000494183 ZBTB40Q9NUA8 1239 aa13.59□□□□□ -0.23
COL25A1-204ENST00000494183 WWC3Q9ULE0 1092 aa13.59□□□□□ -0.23
COL25A1-204ENST00000494183 NSFL1CQ9UNZ2 370 aaKnown RBP13.59□□□□□ -0.23
COL25A1-204ENST00000494183 SMTNL1A8MU46 457 aa13.59□□□□□ -0.23
COL25A1-204ENST00000494183 F8W031 263 aaPredicted RBP13.59□□□□□ -0.23
COL25A1-204ENST00000494183 IRS4O14654 1257 aaPredicted RBP13.59□□□□□ -0.23
COL25A1-204ENST00000494183 ZNF790Q6PG37 636 aa13.59□□□□□ -0.23
COL25A1-204ENST00000494183 CKAP2LQ8IYA6 745 aa13.59□□□□□ -0.23
COL25A1-204ENST00000494183 NECAB1Q8N987 351 aa13.59□□□□□ -0.23
COL25A1-204ENST00000494183 LUC7LQ9NQ29 371 aaKnown RBP13.59□□□□□ -0.23
COL25A1-204ENST00000494183 RBM8AQ9Y5S9 174 aaKnown RBP13.59□□□□□ -0.23
COL25A1-204ENST00000494183 LTKP29376 864 aa13.58□□□□□ -0.24
COL25A1-204ENST00000494183 MCM5P33992 734 aa13.58□□□□□ -0.24
COL25A1-204ENST00000494183 METAP2P50579 478 aaKnown RBP eCLIP13.58□□□□□ -0.24
COL25A1-204ENST00000494183 EIF5P55010 431 aaKnown RBP13.58□□□□□ -0.24
COL25A1-204ENST00000494183 PANK2Q9BZ23 570 aa13.58□□□□□ -0.24
COL25A1-204ENST00000494183 CRNKL1Q9BZJ0 848 aaKnown RBP13.58□□□□□ -0.24
COL25A1-204ENST00000494183 LGR6Q9HBX8 967 aa13.58□□□□□ -0.24
COL25A1-204ENST00000494183 TFCP2L1Q9NZI6 479 aa13.58□□□□□ -0.24
COL25A1-204ENST00000494183 ARHGEF12Q9NZN5 1544 aa13.58□□□□□ -0.24
COL25A1-204ENST00000494183 KIF5BP33176 963 aa13.57□□□□□ -0.24
COL25A1-204ENST00000494183 TEX35Q5T0J7 233 aa13.57□□□□□ -0.24
COL25A1-204ENST00000494183 ESYT1Q9BSJ8 1104 aa13.57□□□□□ -0.24
COL25A1-204ENST00000494183 ACBD3Q9H3P7 528 aa13.57□□□□□ -0.24
COL25A1-204ENST00000494183 KAT14Q9H8E8 782 aa13.57□□□□□ -0.24
COL25A1-204ENST00000494183 KLF18A0A0U1RQI7 1052 aa13.57□□□□□ -0.24
COL25A1-204ENST00000494183 HLA-DOAP06340 250 aa13.57□□□□□ -0.24
COL25A1-204ENST00000494183 TRMT1LQ7Z2T5 733 aaKnown RBP13.57□□□□□ -0.24
COL25A1-204ENST00000494183 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.57□□□□□ -0.24
COL25A1-204ENST00000494183 ZFYVE9O95405 1425 aa13.57□□□□□ -0.24
COL25A1-204ENST00000494183 CFAP65Q6ZU64 1925 aaKnown RBP13.57□□□□□ -0.24
COL25A1-204ENST00000494183 MCMDC2Q4G0Z9 681 aa13.57□□□□□ -0.24
COL25A1-204ENST00000494183 TMX3Q96JJ7 454 aa13.57□□□□□ -0.24
COL25A1-204ENST00000494183 SLC26A6Q9BXS9 759 aa13.57□□□□□ -0.24
COL25A1-204ENST00000494183 CHMP4BP1P59074 171 aa13.57□□□□□ -0.24
COL25A1-204ENST00000494183 NAA16Q6N069 864 aaPredicted RBP13.57□□□□□ -0.24
COL25A1-204ENST00000494183 ZNF771Q7L3S4 317 aaPredicted RBP13.57□□□□□ -0.24
COL25A1-204ENST00000494183 FAM89AQ96GI7 184 aa13.57□□□□□ -0.24
COL25A1-204ENST00000494183 RAB34Q9BZG1 259 aa13.57□□□□□ -0.24
COL25A1-204ENST00000494183 CABP5Q9NP86 173 aa13.57□□□□□ -0.24
COL25A1-204ENST00000494183 PCDH11XQ9BZA7 1347 aa13.56□□□□□ -0.24
COL25A1-204ENST00000494183 PCDH11YQ9BZA8 1340 aa13.56□□□□□ -0.24
COL25A1-204ENST00000494183 SLC4A4Q9Y6R1 1079 aa13.56□□□□□ -0.24
COL25A1-204ENST00000494183 ATP7AQ04656 1500 aa13.56□□□□□ -0.24
COL25A1-204ENST00000494183 FSIP1Q8NA03 581 aa13.56□□□□□ -0.24
COL25A1-204ENST00000494183 TNIP1Q15025 636 aa13.56□□□□□ -0.24
COL25A1-204ENST00000494183 ZC3H12CQ9C0D7 883 aaKnown RBP13.56□□□□□ -0.24
COL25A1-204ENST00000494183 ANO10Q9NW15 660 aa13.56□□□□□ -0.24
COL25A1-204ENST00000494183 CCDC183Q5T5S1 534 aa13.56□□□□□ -0.24
COL25A1-204ENST00000494183 PAF1Q8N7H5 531 aa13.56□□□□□ -0.24
COL25A1-204ENST00000494183 IBSPP21815 317 aaPredicted RBP13.55□□□□□ -0.24
COL25A1-204ENST00000494183 CDR1P51861 262 aa13.55□□□□□ -0.24
COL25A1-204ENST00000494183 WTAPQ15007 396 aa13.55□□□□□ -0.24
COL25A1-204ENST00000494183 CNNM3Q8NE01 707 aa13.55□□□□□ -0.24
COL25A1-204ENST00000494183 CUL5Q93034 780 aa13.55□□□□□ -0.24
COL25A1-204ENST00000494183 SEPT11Q9NVA2 429 aaKnown RBP13.55□□□□□ -0.24
COL25A1-204ENST00000494183 SLAIN2Q9P270 581 aa13.55□□□□□ -0.24
COL25A1-204ENST00000494183 MATR3P43243 847 aaKnown RBP eCLIP13.55□□□□□ -0.24
COL25A1-204ENST00000494183 PAG1Q9NWQ8 432 aa13.55□□□□□ -0.24
COL25A1-204ENST00000494183 EIF2AK4Q9P2K8 1649 aaKnown RBP13.55□□□□□ -0.24
COL25A1-204ENST00000494183 CEP170Q5SW79 1584 aa13.54□□□□□ -0.24
COL25A1-204ENST00000494183 SMC5Q8IY18 1101 aa13.54□□□□□ -0.24
COL25A1-204ENST00000494183 UBA5Q9GZZ9 404 aa13.54□□□□□ -0.24
COL25A1-204ENST00000494183 BICC1Q9H694 974 aaKnown RBP13.54□□□□□ -0.24
COL25A1-204ENST00000494183 EDC4Q6P2E9 1401 aaKnown RBP13.54□□□□□ -0.24
COL25A1-204ENST00000494183 TMEM266Q2M3C6 531 aa13.54□□□□□ -0.24
COL25A1-204ENST00000494183 ESR2Q92731 530 aa13.54□□□□□ -0.24
COL25A1-204ENST00000494183 SBNO1A3KN83 1393 aa13.54□□□□□ -0.24
COL25A1-204ENST00000494183 BIN1O00499 593 aa13.54□□□□□ -0.24
COL25A1-204ENST00000494183 CHL1O00533 1208 aa13.54□□□□□ -0.24
COL25A1-204ENST00000494183 ZBTB43O43298 467 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms