RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 PAX4O43316 350 aa8.21□□□□□ -1.1
CLIP4-212ENST00000493551 FMR1NBQ8N0W7 255 aaPredicted RBP8.21□□□□□ -1.1
CLIP4-212ENST00000493551 CEP63Q96MT8 703 aa8.21□□□□□ -1.1
CLIP4-212ENST00000493551 ZNF358Q9NW07 568 aa8.21□□□□□ -1.1
CLIP4-212ENST00000493551 SERTM1A2A2V5 107 aa8.2□□□□□ -1.1
CLIP4-212ENST00000493551 SEMA3FQ13275 785 aa8.2□□□□□ -1.1
CLIP4-212ENST00000493551 NEUROD2Q15784 382 aa8.2□□□□□ -1.1
CLIP4-212ENST00000493551 SLC9A9Q8IVB4 645 aa8.2□□□□□ -1.1
CLIP4-212ENST00000493551 UBE2OQ9C0C9 1292 aaKnown RBP8.2□□□□□ -1.1
CLIP4-212ENST00000493551 ANKIB1Q9P2G1 1089 aa8.2□□□□□ -1.1
CLIP4-212ENST00000493551 KCNH4Q9UQ05 1017 aa8.2□□□□□ -1.1
CLIP4-212ENST00000493551 EPHA4P54764 986 aa8.19□□□□□ -1.1
CLIP4-212ENST00000493551 EML3Q32P44 896 aa8.19□□□□□ -1.1
CLIP4-212ENST00000493551 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.19□□□□□ -1.1
CLIP4-212ENST00000493551 BHMTQ93088 406 aa8.19□□□□□ -1.1
CLIP4-212ENST00000493551 SLC6A14Q9UN76 642 aa8.19□□□□□ -1.1
CLIP4-212ENST00000493551 COL17A1Q9UMD9 1497 aaPredicted RBP8.19□□□□□ -1.1
CLIP4-212ENST00000493551 SOX11P35716 441 aa8.18□□□□□ -1.1
CLIP4-212ENST00000493551 TXKP42681 527 aa8.18□□□□□ -1.1
CLIP4-212ENST00000493551 TBC1D8BQ0IIM8 1120 aa8.18□□□□□ -1.1
CLIP4-212ENST00000493551 C1orf53Q5VUE5 145 aa8.18□□□□□ -1.1
CLIP4-212ENST00000493551 NUDT8Q8WV74 236 aa8.18□□□□□ -1.1
CLIP4-212ENST00000493551 NOD1Q9Y239 953 aa8.18□□□□□ -1.1
CLIP4-212ENST00000493551 CFTRP13569 1480 aa8.18□□□□□ -1.1
CLIP4-212ENST00000493551 AFF1P51825 1210 aaKnown RBP8.17□□□□□ -1.1
CLIP4-212ENST00000493551 GTF2IP78347 998 aa8.17□□□□□ -1.1
CLIP4-212ENST00000493551 PSME1Q06323 249 aa8.17□□□□□ -1.1
CLIP4-212ENST00000493551 TYRO3Q06418 890 aa8.17□□□□□ -1.1
CLIP4-212ENST00000493551 WASHC4Q2M389 1173 aa8.17□□□□□ -1.1
CLIP4-212ENST00000493551 EFCC1Q9HA90 598 aa8.17□□□□□ -1.1
CLIP4-212ENST00000493551 PCMTD2Q9NV79 361 aa8.17□□□□□ -1.1
CLIP4-212ENST00000493551 LZTS3O60299 673 aaPredicted RBP8.16□□□□□ -1.1
CLIP4-212ENST00000493551 TBCELQ5QJ74 424 aa8.16□□□□□ -1.1
CLIP4-212ENST00000493551 SH3PXD2AQ5TCZ1 1133 aa8.16□□□□□ -1.1
CLIP4-212ENST00000493551 ILDR2Q71H61 639 aa8.16□□□□□ -1.1
CLIP4-212ENST00000493551 HSH2DQ96JZ2 352 aa8.16□□□□□ -1.1
CLIP4-212ENST00000493551 ARAP1Q96P48 1450 aa8.15□□□□□ -1.1
CLIP4-212ENST00000493551 SFI1A8K8P3 1242 aa8.15□□□□□ -1.1
CLIP4-212ENST00000493551 COBLO75128 1261 aa8.15□□□□□ -1.1
CLIP4-212ENST00000493551 YBX3P16989 372 aaKnown RBP eCLIP8.15□□□□□ -1.1
CLIP4-212ENST00000493551 HIRAP54198 1017 aaPredicted RBP8.15□□□□□ -1.1
CLIP4-212ENST00000493551 PSAPL1Q6NUJ1 521 aa8.15□□□□□ -1.1
CLIP4-212ENST00000493551 DMRTC2Q8IXT2 367 aaPredicted RBP8.15□□□□□ -1.1
CLIP4-212ENST00000493551 DTWD1Q8N5C7 304 aa8.15□□□□□ -1.1
CLIP4-212ENST00000493551 WFDC12Q8WWY7 111 aa8.15□□□□□ -1.1
CLIP4-212ENST00000493551 IGFLR1Q9H665 355 aa8.15□□□□□ -1.1
CLIP4-212ENST00000493551 PSMA6P60900 246 aaKnown RBP8.14□□□□□ -1.11
CLIP4-212ENST00000493551 TNS4Q8IZW8 715 aa8.14□□□□□ -1.11
CLIP4-212ENST00000493551 FMNL2Q96PY5 1086 aa8.14□□□□□ -1.11
CLIP4-212ENST00000493551 CHMP3Q9Y3E7 222 aa8.14□□□□□ -1.11
CLIP4-212ENST00000493551 EIF4G3O43432 1585 aaKnown RBP8.14□□□□□ -1.11
CLIP4-212ENST00000493551 CHD1O14646 1710 aa8.13□□□□□ -1.11
CLIP4-212ENST00000493551 PIK3CDO00329 1044 aa8.13□□□□□ -1.11
CLIP4-212ENST00000493551 RGS9O75916 674 aaPredicted RBP8.13□□□□□ -1.11
CLIP4-212ENST00000493551 PRR23CQ6ZRP0 262 aa8.13□□□□□ -1.11
CLIP4-212ENST00000493551 SLC51AQ86UW1 340 aa8.13□□□□□ -1.11
CLIP4-212ENST00000493551 IFT140Q96RY7 1462 aa8.13□□□□□ -1.11
CLIP4-212ENST00000493551 IREB2P48200 963 aaKnown RBP8.12□□□□□ -1.11
CLIP4-212ENST00000493551 MSL1Q68DK7 614 aa8.12□□□□□ -1.11
CLIP4-212ENST00000493551 SUSD3Q96L08 255 aa8.12□□□□□ -1.11
CLIP4-212ENST00000493551 PHACTR1Q9C0D0 580 aa8.12□□□□□ -1.11
CLIP4-212ENST00000493551 DNAJB12Q9NXW2 375 aaKnown RBP8.12□□□□□ -1.11
CLIP4-212ENST00000493551 NAGPAQ9UK23 515 aa8.12□□□□□ -1.11
CLIP4-212ENST00000493551 TOP2AP11388 1531 aaKnown RBP8.12□□□□□ -1.11
CLIP4-212ENST00000493551 AQRO60306 1485 aaKnown RBP eCLIP8.12□□□□□ -1.11
CLIP4-212ENST00000493551 SKIP12755 728 aa8.11□□□□□ -1.11
CLIP4-212ENST00000493551 NOS3P29474 1203 aa8.11□□□□□ -1.11
CLIP4-212ENST00000493551 ABL2P42684 1182 aa8.11□□□□□ -1.11
CLIP4-212ENST00000493551 POTEAQ6S8J7 498 aa8.11□□□□□ -1.11
CLIP4-212ENST00000493551 FBXO11Q86XK2 927 aa8.11□□□□□ -1.11
CLIP4-212ENST00000493551 ZNF280CQ8ND82 737 aa8.11□□□□□ -1.11
CLIP4-212ENST00000493551 GDPD2Q9HCC8 539 aa8.11□□□□□ -1.11
CLIP4-212ENST00000493551 RSF1Q96T23 1441 aaPredicted RBP8.11□□□□□ -1.11
CLIP4-212ENST00000493551 TOPBP1Q92547 1522 aa8.1□□□□□ -1.11
CLIP4-212ENST00000493551 NCOA4Q13772 614 aa8.1□□□□□ -1.11
CLIP4-212ENST00000493551 MEGF10Q96KG7 1140 aa8.1□□□□□ -1.11
CLIP4-212ENST00000493551 HCN4Q9Y3Q4 1203 aa8.1□□□□□ -1.11
CLIP4-212ENST00000493551 IRAK1P51617 712 aa8.09□□□□□ -1.11
CLIP4-212ENST00000493551 IGF2-ASQ6U949 168 aa8.09□□□□□ -1.11
CLIP4-212ENST00000493551 NFATC2IPQ8NCF5 419 aa8.09□□□□□ -1.11
CLIP4-212ENST00000493551 PNMA5Q96PV4 448 aa8.09□□□□□ -1.11
CLIP4-212ENST00000493551 FSTP19883 344 aa8.08□□□□□ -1.12
CLIP4-212ENST00000493551 SSTR4P31391 388 aa8.08□□□□□ -1.12
CLIP4-212ENST00000493551 PCSK7Q16549 785 aa8.08□□□□□ -1.12
CLIP4-212ENST00000493551 HIF1AQ16665 826 aa8.08□□□□□ -1.12
CLIP4-212ENST00000493551 BTLAQ7Z6A9 289 aa8.08□□□□□ -1.12
CLIP4-212ENST00000493551 TSPAN10Q9H1Z9 355 aaPredicted RBP8.08□□□□□ -1.12
CLIP4-212ENST00000493551 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.08□□□□□ -1.12
CLIP4-212ENST00000493551 CD97P48960 835 aa8.07□□□□□ -1.12
CLIP4-212ENST00000493551 GSX2Q9BZM3 304 aa8.07□□□□□ -1.12
CLIP4-212ENST00000493551 FRRS1LQ9P0K9 344 aa8.07□□□□□ -1.12
CLIP4-212ENST00000493551 FAM35AQ86V20 835 aa8.06□□□□□ -1.12
CLIP4-212ENST00000493551 TRIM50Q86XT4 487 aa8.06□□□□□ -1.12
CLIP4-212ENST00000493551 WFDC8Q8IUA0 241 aa8.06□□□□□ -1.12
CLIP4-212ENST00000493551 PRDM2Q13029 1718 aa8.06□□□□□ -1.12
CLIP4-212ENST00000493551 CCDC88BA6NC98 1476 aa8.06□□□□□ -1.12
CLIP4-212ENST00000493551 NFKB1P19838 968 aa8.05□□□□□ -1.12
CLIP4-212ENST00000493551 CCINQ13939 588 aa8.05□□□□□ -1.12
CLIP4-212ENST00000493551 GRIK5Q16478 980 aa8.05□□□□□ -1.12
CLIP4-212ENST00000493551 LCE1DQ5T752 114 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms