RNA–Protein interactions for RNA: ENST00000493498.1

TRIM50-204, Transcript of tripartite motif containing 50, humanhuman

TSL 4

Gene TRIM50, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-204ENST00000493498 HOXA10P31260 410 aaPredicted RBP17.72■□□□□ 0.43
TRIM50-204ENST00000493498 EPHX2P34913 555 aa17.72■□□□□ 0.43
TRIM50-204ENST00000493498 PPP1R42Q7Z4L9 355 aa17.72■□□□□ 0.43
TRIM50-204ENST00000493498 TMX4Q9H1E5 349 aaPredicted RBP17.72■□□□□ 0.43
TRIM50-204ENST00000493498 BABAM1Q9NWV8 329 aa17.72■□□□□ 0.43
TRIM50-204ENST00000493498 ZNF541Q9H0D2 1346 aa17.72■□□□□ 0.43
TRIM50-204ENST00000493498 CNTNAP1P78357 1384 aa17.71■□□□□ 0.43
TRIM50-204ENST00000493498 ABCC12Q96J65 1359 aa17.71■□□□□ 0.43
TRIM50-204ENST00000493498 TMEM88BA6NKF7 163 aa17.71■□□□□ 0.43
TRIM50-204ENST00000493498 POTEIP0CG38 1075 aa17.71■□□□□ 0.43
TRIM50-204ENST00000493498 POTEJP0CG39 1038 aa17.71■□□□□ 0.43
TRIM50-204ENST00000493498 MYL6BP14649 208 aa17.71■□□□□ 0.43
TRIM50-204ENST00000493498 EIF6P56537 245 aaKnown RBP17.71■□□□□ 0.43
TRIM50-204ENST00000493498 PARP10Q53GL7 1025 aa17.71■□□□□ 0.43
TRIM50-204ENST00000493498 EAPPQ56P03 285 aaPredicted RBP17.71■□□□□ 0.43
TRIM50-204ENST00000493498 NUTM1Q86Y26 1132 aa17.71■□□□□ 0.43
TRIM50-204ENST00000493498 RBM17Q96I25 401 aaKnown RBP17.71■□□□□ 0.43
TRIM50-204ENST00000493498 CRAMP1Q96RY5 1269 aa17.71■□□□□ 0.43
TRIM50-204ENST00000493498 CLEC11AQ9Y240 323 aa17.71■□□□□ 0.43
TRIM50-204ENST00000493498 LMOD3Q0VAK6 560 aa17.7■□□□□ 0.42
TRIM50-204ENST00000493498 GIGYF2Q6Y7W6 1299 aaKnown RBP17.7■□□□□ 0.42
TRIM50-204ENST00000493498 MKRN1Q9UHC7 482 aaKnown RBP17.7■□□□□ 0.42
TRIM50-204ENST00000493498 SNED1Q8TER0 1413 aa17.7■□□□□ 0.42
TRIM50-204ENST00000493498 RNF123Q5XPI4 1314 aa17.7■□□□□ 0.42
TRIM50-204ENST00000493498 ADAMTSL1Q8N6G6 1762 aa17.69■□□□□ 0.42
TRIM50-204ENST00000493498 LMOD1P29536 600 aaPredicted RBP17.69■□□□□ 0.42
TRIM50-204ENST00000493498 TTLL7Q6ZT98 887 aa17.69■□□□□ 0.42
TRIM50-204ENST00000493498 ZNF34Q8IZ26 560 aa17.69■□□□□ 0.42
TRIM50-204ENST00000493498 FAM9BQ8IZU0 186 aa17.69■□□□□ 0.42
TRIM50-204ENST00000493498 ZBTB3Q9H5J0 574 aa17.69■□□□□ 0.42
TRIM50-204ENST00000493498 TSPYL4Q9UJ04 414 aa17.69■□□□□ 0.42
TRIM50-204ENST00000493498 ITGBL1O95965 494 aaPredicted RBP17.68■□□□□ 0.42
TRIM50-204ENST00000493498 GPTP24298 496 aa17.68■□□□□ 0.42
TRIM50-204ENST00000493498 OLFM4Q6UX06 510 aa17.68■□□□□ 0.42
TRIM50-204ENST00000493498 NLRP3Q96P20 1036 aa17.68■□□□□ 0.42
TRIM50-204ENST00000493498 VPS33BQ9H267 617 aa17.68■□□□□ 0.42
TRIM50-204ENST00000493498 UBN2Q6ZU65 1347 aa17.68■□□□□ 0.42
TRIM50-204ENST00000493498 NTSR2O95665 410 aa17.67■□□□□ 0.42
TRIM50-204ENST00000493498 HSP90AB3PQ58FF7 597 aa17.67■□□□□ 0.42
TRIM50-204ENST00000493498 SUSD4Q5VX71 490 aa17.67■□□□□ 0.42
TRIM50-204ENST00000493498 LARGE2Q8N3Y3 721 aa17.67■□□□□ 0.42
TRIM50-204ENST00000493498 AIDAQ96BJ3 306 aa17.67■□□□□ 0.42
TRIM50-204ENST00000493498 THUMPD2Q9BTF0 503 aaKnown RBP17.67■□□□□ 0.42
TRIM50-204ENST00000493498 PPEF1O14829 653 aaPredicted RBP17.66■□□□□ 0.42
TRIM50-204ENST00000493498 WDR43Q15061 677 aaKnown RBP eCLIP17.66■□□□□ 0.42
TRIM50-204ENST00000493498 CNTROBQ8N137 903 aa17.66■□□□□ 0.42
TRIM50-204ENST00000493498 RIPK4P57078 832 aa17.65■□□□□ 0.42
TRIM50-204ENST00000493498 NIM1KQ8IY84 436 aa17.65■□□□□ 0.42
TRIM50-204ENST00000493498 SUPT20HQ8NEM7 779 aa17.65■□□□□ 0.42
TRIM50-204ENST00000493498 UTP14AQ9BVJ6 771 aaKnown RBP17.65■□□□□ 0.42
TRIM50-204ENST00000493498 ANKRD36CQ5JPF3 1778 aa17.64■□□□□ 0.41
TRIM50-204ENST00000493498 SLC10A5Q5PT55 438 aa17.64■□□□□ 0.41
TRIM50-204ENST00000493498 PRDM10Q9NQV6 1147 aa17.64■□□□□ 0.41
TRIM50-204ENST00000493498 GJA3Q9Y6H8 435 aa17.64■□□□□ 0.41
TRIM50-204ENST00000493498 CAPN15O75808 1086 aa17.63■□□□□ 0.41
TRIM50-204ENST00000493498 EIF2S2P20042 333 aaKnown RBP17.63■□□□□ 0.41
TRIM50-204ENST00000493498 CTCFP49711 727 aaPredicted RBP17.63■□□□□ 0.41
TRIM50-204ENST00000493498 ADAMTS8Q9UP79 889 aa17.63■□□□□ 0.41
TRIM50-204ENST00000493498 RASSF10A6NK89 507 aa17.62■□□□□ 0.41
TRIM50-204ENST00000493498 VEGFBP49765 207 aa17.62■□□□□ 0.41
TRIM50-204ENST00000493498 NCBP3Q53F19 620 aaKnown RBP17.62■□□□□ 0.41
TRIM50-204ENST00000493498 MAP1SQ66K74 1059 aaPredicted RBP17.62■□□□□ 0.41
TRIM50-204ENST00000493498 USP50Q70EL3 339 aaPredicted RBP17.62■□□□□ 0.41
TRIM50-204ENST00000493498 ATP6V0A2Q9Y487 856 aa17.62■□□□□ 0.41
TRIM50-204ENST00000493498 PPIP5K2O43314 1243 aa17.61■□□□□ 0.41
TRIM50-204ENST00000493498 BBOX1O75936 387 aa17.61■□□□□ 0.41
TRIM50-204ENST00000493498 TMPOP42166 694 aaKnown RBP17.61■□□□□ 0.41
TRIM50-204ENST00000493498 PDIA6Q15084 440 aa17.61■□□□□ 0.41
TRIM50-204ENST00000493498 DEFB115Q30KQ5 88 aa17.61■□□□□ 0.41
TRIM50-204ENST00000493498 LRP10Q7Z4F1 713 aa17.61■□□□□ 0.41
TRIM50-204ENST00000493498 TRPM7Q96QT4 1865 aa17.61■□□□□ 0.41
TRIM50-204ENST00000493498 ABT1Q9ULW3 272 aaKnown RBP17.6■□□□□ 0.41
TRIM50-204ENST00000493498 COL4A5P29400 1685 aa17.59■□□□□ 0.41
TRIM50-204ENST00000493498 CDHR2Q9BYE9 1310 aa17.59■□□□□ 0.41
TRIM50-204ENST00000493498 FOXN1O15353 648 aa17.59■□□□□ 0.41
TRIM50-204ENST00000493498 SCNN1DP51172 638 aa17.59■□□□□ 0.41
TRIM50-204ENST00000493498 MAP2K1Q02750 393 aaPredicted RBP17.59■□□□□ 0.41
TRIM50-204ENST00000493498 TMC4Q7Z404 712 aa17.59■□□□□ 0.41
TRIM50-204ENST00000493498 RTFDC1Q9BY42 306 aaPredicted RBP17.59■□□□□ 0.41
TRIM50-204ENST00000493498 DDX21Q9NR30 783 aaKnown RBP eCLIP17.59■□□□□ 0.41
TRIM50-204ENST00000493498 ABCC4O15439 1325 aa17.58■□□□□ 0.4
TRIM50-204ENST00000493498 ZBED9Q6R2W3 1325 aa17.58■□□□□ 0.4
TRIM50-204ENST00000493498 TCERG1O14776 1098 aaKnown RBP17.58■□□□□ 0.4
TRIM50-204ENST00000493498 CENPBP07199 599 aaPredicted RBP17.58■□□□□ 0.4
TRIM50-204ENST00000493498 ECE1P42892 770 aa17.58■□□□□ 0.4
TRIM50-204ENST00000493498 DPP8Q6V1X1 898 aaPredicted RBP17.58■□□□□ 0.4
TRIM50-204ENST00000493498 DDX46Q7L014 1031 aaKnown RBP17.58■□□□□ 0.4
TRIM50-204ENST00000493498 COPS6Q7L5N1 327 aa17.58■□□□□ 0.4
TRIM50-204ENST00000493498 SP8Q8IXZ3 490 aa17.58■□□□□ 0.4
TRIM50-204ENST00000493498 YTHDC1Q96MU7 727 aaKnown RBP17.58■□□□□ 0.4
TRIM50-204ENST00000493498 ADARB2Q9NS39 739 aaKnown RBP17.58■□□□□ 0.4
TRIM50-204ENST00000493498 WBP1LQ9NX94 342 aa17.58■□□□□ 0.4
TRIM50-204ENST00000493498 ZNRF3Q9ULT6 936 aa17.58■□□□□ 0.4
TRIM50-204ENST00000493498 LAMB2P55268 1798 aa17.58■□□□□ 0.4
TRIM50-204ENST00000493498 LTBP1Q14766 1721 aa17.58■□□□□ 0.4
TRIM50-204ENST00000493498 SH3TC1Q8TE82 1336 aa17.57■□□□□ 0.4
TRIM50-204ENST00000493498 HOXB7P09629 217 aa17.57■□□□□ 0.4
TRIM50-204ENST00000493498 HNRNPUQ00839 825 aaKnown RBP eCLIP17.57■□□□□ 0.42e-8■□□□□ 9
TRIM50-204ENST00000493498 TCIRG1Q13488 830 aa17.57■□□□□ 0.4
TRIM50-204ENST00000493498 C3orf67Q6ZVT6 689 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms