RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 DDNO94850 711 aaPredicted RBP19.49■□□□□ 0.71
CDC42SE1-205ENST00000491825 FKBP4Q02790 459 aaKnown RBP eCLIP19.49■□□□□ 0.71
CDC42SE1-205ENST00000491825 PDIA6Q15084 440 aa19.49■□□□□ 0.71
CDC42SE1-205ENST00000491825 NUTM1Q86Y26 1132 aa19.49■□□□□ 0.71
CDC42SE1-205ENST00000491825 WDR63Q8IWG1 891 aa19.49■□□□□ 0.71
CDC42SE1-205ENST00000491825 NYXQ9GZU5 481 aa19.49■□□□□ 0.71
CDC42SE1-205ENST00000491825 ZBTB3Q9H5J0 574 aa19.49■□□□□ 0.71
CDC42SE1-205ENST00000491825 GNAI1P63096 354 aa19.48■□□□□ 0.71
CDC42SE1-205ENST00000491825 ZNF34Q8IZ26 560 aa19.48■□□□□ 0.71
CDC42SE1-205ENST00000491825 ALDH1B1P30837 517 aa19.47■□□□□ 0.71
CDC42SE1-205ENST00000491825 SUSD4Q5VX71 490 aa19.47■□□□□ 0.71
CDC42SE1-205ENST00000491825 NTSR2O95665 410 aa19.46■□□□□ 0.71
CDC42SE1-205ENST00000491825 GPTP24298 496 aa19.46■□□□□ 0.71
CDC42SE1-205ENST00000491825 GTF2E1P29083 439 aaPredicted RBP19.46■□□□□ 0.71
CDC42SE1-205ENST00000491825 PROSER3Q2NL68 480 aa19.46■□□□□ 0.71
CDC42SE1-205ENST00000491825 GIGYF2Q6Y7W6 1299 aaKnown RBP19.46■□□□□ 0.71
CDC42SE1-205ENST00000491825 RTKN2Q8IZC4 609 aa19.46■□□□□ 0.71
CDC42SE1-205ENST00000491825 L3MBTL3Q96JM7 780 aaPredicted RBP19.46■□□□□ 0.71
CDC42SE1-205ENST00000491825 ZNF277Q9NRM2 450 aaPredicted RBP19.46■□□□□ 0.71
CDC42SE1-205ENST00000491825 POTEIP0CG38 1075 aa19.45■□□□□ 0.7
CDC42SE1-205ENST00000491825 POTEJP0CG39 1038 aa19.45■□□□□ 0.7
CDC42SE1-205ENST00000491825 HOXA10P31260 410 aaPredicted RBP19.45■□□□□ 0.7
CDC42SE1-205ENST00000491825 MBIPQ9NS73 344 aa19.45■□□□□ 0.7
CDC42SE1-205ENST00000491825 NUP98P52948 1817 aa19.45■□□□□ 0.7
CDC42SE1-205ENST00000491825 ZNF541Q9H0D2 1346 aa19.45■□□□□ 0.7
CDC42SE1-205ENST00000491825 SALL2Q9Y467 1007 aaPredicted RBP19.44■□□□□ 0.7
CDC42SE1-205ENST00000491825 EIF2S2P20042 333 aaKnown RBP19.43■□□□□ 0.7
CDC42SE1-205ENST00000491825 C3orf67Q6ZVT6 689 aa19.43■□□□□ 0.7
CDC42SE1-205ENST00000491825 PSMD1Q99460 953 aa19.43■□□□□ 0.7
CDC42SE1-205ENST00000491825 LAS1LQ9Y4W2 734 aaKnown RBP19.43■□□□□ 0.7
CDC42SE1-205ENST00000491825 ANXA1P04083 346 aa19.42■□□□□ 0.7
CDC42SE1-205ENST00000491825 IARSP41252 1262 aaKnown RBP19.42■□□□□ 0.7
CDC42SE1-205ENST00000491825 PARP10Q53GL7 1025 aa19.42■□□□□ 0.7
CDC42SE1-205ENST00000491825 SLC51AQ86UW1 340 aa19.42■□□□□ 0.7
CDC42SE1-205ENST00000491825 COL4A5P29400 1685 aa19.41■□□□□ 0.7
CDC42SE1-205ENST00000491825 IQCA1LA6NCM1 817 aa19.41■□□□□ 0.7
CDC42SE1-205ENST00000491825 FZD9O00144 591 aa19.41■□□□□ 0.7
CDC42SE1-205ENST00000491825 CHADLQ6NUI6 762 aa19.41■□□□□ 0.7
CDC42SE1-205ENST00000491825 SYNE4Q8N205 404 aa19.41■□□□□ 0.7
CDC42SE1-205ENST00000491825 HOXB7P09629 217 aa19.4■□□□□ 0.7
CDC42SE1-205ENST00000491825 KRT24Q2M2I5 525 aa19.4■□□□□ 0.7
CDC42SE1-205ENST00000491825 CC2D2BQ6DHV5 1058 aa19.4■□□□□ 0.7
CDC42SE1-205ENST00000491825 RPGRQ92834 1020 aaKnown RBP19.4■□□□□ 0.7
CDC42SE1-205ENST00000491825 CRAMP1Q96RY5 1269 aa19.4■□□□□ 0.7
CDC42SE1-205ENST00000491825 TAF1DQ9H5J8 278 aaPredicted RBP19.4■□□□□ 0.7
CDC42SE1-205ENST00000491825 FANCIQ9NVI1 1328 aa19.4■□□□□ 0.7
CDC42SE1-205ENST00000491825 HNRNPUQ00839 825 aaKnown RBP eCLIP19.39■□□□□ 0.69
CDC42SE1-205ENST00000491825 GOLGA2Q08379 1002 aa19.39■□□□□ 0.69
CDC42SE1-205ENST00000491825 PPP1R42Q7Z4L9 355 aa19.39■□□□□ 0.69
CDC42SE1-205ENST00000491825 MYH16Q9H6N6 1097 aa19.39■□□□□ 0.69
CDC42SE1-205ENST00000491825 SLC10A5Q5PT55 438 aa19.38■□□□□ 0.69
CDC42SE1-205ENST00000491825 COPS6Q7L5N1 327 aa19.38■□□□□ 0.69
CDC42SE1-205ENST00000491825 SPINK5Q9NQ38 1064 aaPredicted RBP19.38■□□□□ 0.69
CDC42SE1-205ENST00000491825 RNF123Q5XPI4 1314 aa19.37■□□□□ 0.69
CDC42SE1-205ENST00000491825 ZBED9Q6R2W3 1325 aa19.37■□□□□ 0.69
CDC42SE1-205ENST00000491825 PASKQ96RG2 1323 aa19.37■□□□□ 0.69
CDC42SE1-205ENST00000491825 E9PSI1 815 aa19.37■□□□□ 0.69
CDC42SE1-205ENST00000491825 LDHDQ86WU2 507 aa19.37■□□□□ 0.69
CDC42SE1-205ENST00000491825 XAGE3Q8WTP9 111 aa19.37■□□□□ 0.69
CDC42SE1-205ENST00000491825 NECTIN2Q92692 538 aa19.37■□□□□ 0.69
CDC42SE1-205ENST00000491825 TSR2Q969E8 191 aaKnown RBP19.37■□□□□ 0.69
CDC42SE1-205ENST00000491825 RBM17Q96I25 401 aaKnown RBP19.37■□□□□ 0.69
CDC42SE1-205ENST00000491825 UTP14AQ9BVJ6 771 aaKnown RBP19.37■□□□□ 0.69
CDC42SE1-205ENST00000491825 SCN4AP35499 1836 aa19.37■□□□□ 0.69
CDC42SE1-205ENST00000491825 ADAMTSL1Q8N6G6 1762 aa19.37■□□□□ 0.69
CDC42SE1-205ENST00000491825 PPEF1O14829 653 aaPredicted RBP19.36■□□□□ 0.69
CDC42SE1-205ENST00000491825 GRIPAP1Q4V328 841 aa19.36■□□□□ 0.69
CDC42SE1-205ENST00000491825 NLRP10Q86W26 655 aa19.36■□□□□ 0.69
CDC42SE1-205ENST00000491825 DDX21Q9NR30 783 aaKnown RBP eCLIP19.36■□□□□ 0.69
CDC42SE1-205ENST00000491825 CREBZFQ9NS37 354 aa19.36■□□□□ 0.69
CDC42SE1-205ENST00000491825 HSP90AB3PQ58FF7 597 aa19.35■□□□□ 0.69
CDC42SE1-205ENST00000491825 GPC2Q8N158 579 aa19.35■□□□□ 0.69
CDC42SE1-205ENST00000491825 NLRP3Q96P20 1036 aa19.35■□□□□ 0.69
CDC42SE1-205ENST00000491825 HACL1Q9UJ83 578 aa19.35■□□□□ 0.69
CDC42SE1-205ENST00000491825 ABCC4O15439 1325 aa19.34■□□□□ 0.69
CDC42SE1-205ENST00000491825 AIMP1Q12904 312 aaKnown RBP19.34■□□□□ 0.69
CDC42SE1-205ENST00000491825 JDP2Q8WYK2 163 aa19.34■□□□□ 0.69
CDC42SE1-205ENST00000491825 CHPF2Q9P2E5 772 aa19.34■□□□□ 0.69
CDC42SE1-205ENST00000491825 ITGBL1O95965 494 aaPredicted RBP19.33■□□□□ 0.68
CDC42SE1-205ENST00000491825 EPHX2P34913 555 aa19.33■□□□□ 0.68
CDC42SE1-205ENST00000491825 SLFN5Q08AF3 891 aa19.33■□□□□ 0.68
CDC42SE1-205ENST00000491825 TCIRG1Q13488 830 aa19.33■□□□□ 0.68
CDC42SE1-205ENST00000491825 DUSP27Q5VZP5 1158 aa19.33■□□□□ 0.68
CDC42SE1-205ENST00000491825 ANKRD36CQ5JPF3 1778 aa19.33■□□□□ 0.68
CDC42SE1-205ENST00000491825 TRMT2AQ8IZ69 625 aaKnown RBP19.32■□□□□ 0.68
CDC42SE1-205ENST00000491825 C8orf58Q8NAV2 365 aa19.32■□□□□ 0.68
CDC42SE1-205ENST00000491825 ATP6V0A2Q9Y487 856 aa19.32■□□□□ 0.68
CDC42SE1-205ENST00000491825 TCERG1O14776 1098 aaKnown RBP19.31■□□□□ 0.68
CDC42SE1-205ENST00000491825 EAPPQ56P03 285 aaPredicted RBP19.31■□□□□ 0.68
CDC42SE1-205ENST00000491825 COL13A1Q5TAT6 717 aaPredicted RBP19.31■□□□□ 0.68
CDC42SE1-205ENST00000491825 HDGFL1Q5TGJ6 251 aa19.31■□□□□ 0.68
CDC42SE1-205ENST00000491825 CHMP4AQ9BY43 222 aa19.31■□□□□ 0.68
CDC42SE1-205ENST00000491825 LTBP1Q14766 1721 aa19.31■□□□□ 0.68
CDC42SE1-205ENST00000491825 HCLS1P14317 486 aaPredicted RBP19.3■□□□□ 0.68
CDC42SE1-205ENST00000491825 PNMA8AQ86V59 439 aaPredicted RBP19.3■□□□□ 0.68
CDC42SE1-205ENST00000491825 LARGE2Q8N3Y3 721 aa19.3■□□□□ 0.68
CDC42SE1-205ENST00000491825 RTFDC1Q9BY42 306 aaPredicted RBP19.3■□□□□ 0.68
CDC42SE1-205ENST00000491825 SH3TC1Q8TE82 1336 aa19.29■□□□□ 0.68
CDC42SE1-205ENST00000491825 HSPA1AP0DMV8 641 aaKnown RBP19.29■□□□□ 0.68
CDC42SE1-205ENST00000491825 HSPA1BP0DMV9 641 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms