RNA–Protein interactions for RNA: ENST00000491770.1

UBE2D4-211, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-211ENST00000491770 PNNQ9H307 717 aaKnown RBP6.75□□□□□ -1.33
UBE2D4-211ENST00000491770 SLC52A2Q9HAB3 445 aa6.75□□□□□ -1.33
UBE2D4-211ENST00000491770 BCL2L12Q9HB09 334 aa6.75□□□□□ -1.33
UBE2D4-211ENST00000491770 ATG3Q9NT62 314 aa6.75□□□□□ -1.33
UBE2D4-211ENST00000491770 CD2APQ9Y5K6 639 aa6.75□□□□□ -1.33
UBE2D4-211ENST00000491770 UBR2Q8IWV8 1755 aa6.74□□□□□ -1.33
UBE2D4-211ENST00000491770 A0A087WZG4 1122 aa6.74□□□□□ -1.33
UBE2D4-211ENST00000491770 SENP3-EIF4A1A0A087X0R7 540 aa6.74□□□□□ -1.33
UBE2D4-211ENST00000491770 COL9A1P20849 921 aa6.74□□□□□ -1.33
UBE2D4-211ENST00000491770 ITPK1Q13572 414 aa6.74□□□□□ -1.33
UBE2D4-211ENST00000491770 WDR43Q15061 677 aaKnown RBP eCLIP6.74□□□□□ -1.33
UBE2D4-211ENST00000491770 ZNF526Q8TF50 670 aaPredicted RBP6.74□□□□□ -1.33
UBE2D4-211ENST00000491770 PHOX2BQ99453 314 aa6.74□□□□□ -1.33
UBE2D4-211ENST00000491770 RBM27Q9P2N5 1060 aaKnown RBP6.74□□□□□ -1.33
UBE2D4-211ENST00000491770 BCS1LQ9Y276 419 aa6.74□□□□□ -1.33
UBE2D4-211ENST00000491770 CACNA1SQ13698 1873 aa6.74□□□□□ -1.33
UBE2D4-211ENST00000491770 RNMTO43148 476 aaKnown RBP6.73□□□□□ -1.33
UBE2D4-211ENST00000491770 ST18O60284 1047 aa6.73□□□□□ -1.33
UBE2D4-211ENST00000491770 RPS6KA4O75676 772 aa6.73□□□□□ -1.33
UBE2D4-211ENST00000491770 CANXP27824 592 aaKnown RBP6.73□□□□□ -1.33
UBE2D4-211ENST00000491770 PADI6Q6TGC4 694 aa6.73□□□□□ -1.33
UBE2D4-211ENST00000491770 C16orf71Q8IYS4 520 aaPredicted RBP6.73□□□□□ -1.33
UBE2D4-211ENST00000491770 FMNL2Q96PY5 1086 aa6.73□□□□□ -1.33
UBE2D4-211ENST00000491770 KDM4CQ9H3R0 1056 aa6.73□□□□□ -1.33
UBE2D4-211ENST00000491770 FAM198AQ9UFP1 575 aa6.73□□□□□ -1.33
UBE2D4-211ENST00000491770 ZNF652Q9Y2D9 606 aa6.73□□□□□ -1.33
UBE2D4-211ENST00000491770 C10orf71Q711Q0 1435 aa6.73□□□□□ -1.33
UBE2D4-211ENST00000491770 COL3A1P02461 1466 aaPredicted RBP6.73□□□□□ -1.33
UBE2D4-211ENST00000491770 KIF13BQ9NQT8 1826 aa6.72□□□□□ -1.33
UBE2D4-211ENST00000491770 BTBD11A6QL63 1104 aa6.72□□□□□ -1.33
UBE2D4-211ENST00000491770 PRSS12P56730 875 aa6.72□□□□□ -1.33
UBE2D4-211ENST00000491770 ST5P78524 1137 aa6.72□□□□□ -1.33
UBE2D4-211ENST00000491770 LMOD3Q0VAK6 560 aa6.72□□□□□ -1.33
UBE2D4-211ENST00000491770 SLC39A6Q13433 755 aa6.72□□□□□ -1.33
UBE2D4-211ENST00000491770 MTHFSDQ2M296 383 aaKnown RBP6.72□□□□□ -1.33
UBE2D4-211ENST00000491770 FAM161AQ3B820 660 aa6.72□□□□□ -1.33
UBE2D4-211ENST00000491770 RC3H1Q5TC82 1133 aaKnown RBP6.72□□□□□ -1.33
UBE2D4-211ENST00000491770 DNAJC10Q8IXB1 793 aa6.72□□□□□ -1.33
UBE2D4-211ENST00000491770 PARP9Q8IXQ6 854 aa6.72□□□□□ -1.33
UBE2D4-211ENST00000491770 TEX13AQ9BXU3 409 aaPredicted RBP6.72□□□□□ -1.33
UBE2D4-211ENST00000491770 ATP10DQ9P241 1426 aa6.72□□□□□ -1.33
UBE2D4-211ENST00000491770 USP42Q9H9J4 1324 aaKnown RBP6.72□□□□□ -1.33
UBE2D4-211ENST00000491770 SIPA1L3O60292 1781 aaPredicted RBP6.72□□□□□ -1.33
UBE2D4-211ENST00000491770 DLG5Q8TDM6 1919 aa6.72□□□□□ -1.33
UBE2D4-211ENST00000491770 ARFGEF1Q9Y6D6 1849 aa6.71□□□□□ -1.33
UBE2D4-211ENST00000491770 KCPQ6ZWJ8 1503 aa6.71□□□□□ -1.33
UBE2D4-211ENST00000491770 GTF2E1P29083 439 aaPredicted RBP6.71□□□□□ -1.34
UBE2D4-211ENST00000491770 BICDL1Q6ZP65 573 aa6.71□□□□□ -1.34
UBE2D4-211ENST00000491770 ZNF784Q8NCA9 323 aaPredicted RBP6.71□□□□□ -1.34
UBE2D4-211ENST00000491770 CDCA7LQ96GN5 454 aa6.71□□□□□ -1.34
UBE2D4-211ENST00000491770 TMUB1Q9BVT8 246 aa6.71□□□□□ -1.34
UBE2D4-211ENST00000491770 REPIN1Q9BWE0 567 aaKnown RBP6.71□□□□□ -1.34
UBE2D4-211ENST00000491770 ADGRG1Q9Y653 693 aa6.71□□□□□ -1.34
UBE2D4-211ENST00000491770 BCORQ6W2J9 1755 aa6.71□□□□□ -1.34
UBE2D4-211ENST00000491770 PXDNLA1KZ92 1463 aa6.71□□□□□ -1.34
UBE2D4-211ENST00000491770 MYH14Q7Z406 1995 aaKnown RBP6.71□□□□□ -1.34
UBE2D4-211ENST00000491770 ADAMTS7Q9UKP4 1686 aa6.71□□□□□ -1.34
UBE2D4-211ENST00000491770 HEG1Q9ULI3 1381 aa6.7□□□□□ -1.34
UBE2D4-211ENST00000491770 TIAM2Q8IVF5 1701 aa6.7□□□□□ -1.34
UBE2D4-211ENST00000491770 PPP1R3GB7ZBB8 358 aa6.7□□□□□ -1.34
UBE2D4-211ENST00000491770 PTPREP23469 700 aa6.7□□□□□ -1.34
UBE2D4-211ENST00000491770 PPP2R1AP30153 589 aa6.7□□□□□ -1.34
UBE2D4-211ENST00000491770 DALRD3Q5D0E6 543 aaKnown RBP6.7□□□□□ -1.34
UBE2D4-211ENST00000491770 USPL1Q5W0Q7 1092 aa6.7□□□□□ -1.34
UBE2D4-211ENST00000491770 POTEEQ6S8J3 1075 aa6.7□□□□□ -1.34
UBE2D4-211ENST00000491770 KIF6Q6ZMV9 814 aa6.7□□□□□ -1.34
UBE2D4-211ENST00000491770 ARHGAP27Q6ZUM4 889 aa6.7□□□□□ -1.34
UBE2D4-211ENST00000491770 SMIM5Q71RC9 77 aa6.7□□□□□ -1.34
UBE2D4-211ENST00000491770 SRP68Q9UHB9 627 aaKnown RBP6.7□□□□□ -1.34
UBE2D4-211ENST00000491770 ZBTB1Q9Y2K1 713 aa6.7□□□□□ -1.34
UBE2D4-211ENST00000491770 AFDNP55196 1824 aaKnown RBP6.7□□□□□ -1.34
UBE2D4-211ENST00000491770 SOS1Q07889 1333 aaPredicted RBP6.7□□□□□ -1.34
UBE2D4-211ENST00000491770 CARMIL3Q8ND23 1372 aa6.69□□□□□ -1.34
UBE2D4-211ENST00000491770 DLEC1Q9Y238 1755 aa6.69□□□□□ -1.34
UBE2D4-211ENST00000491770 C3orf80F5H4A9 247 aa6.69□□□□□ -1.34
UBE2D4-211ENST00000491770 GYS1P13807 737 aa6.69□□□□□ -1.34
UBE2D4-211ENST00000491770 YBX3P16989 372 aaKnown RBP eCLIP6.69□□□□□ -1.34
UBE2D4-211ENST00000491770 TGFB2P61812 414 aa6.69□□□□□ -1.34
UBE2D4-211ENST00000491770 LCE2DQ5TA82 110 aaPredicted RBP6.69□□□□□ -1.34
UBE2D4-211ENST00000491770 ZNF790Q6PG37 636 aa6.69□□□□□ -1.34
UBE2D4-211ENST00000491770 METTL3Q86U44 580 aaKnown RBP6.69□□□□□ -1.34
UBE2D4-211ENST00000491770 CNBD1Q8NA66 436 aa6.69□□□□□ -1.34
UBE2D4-211ENST00000491770 PXYLP1Q8TE99 480 aa6.69□□□□□ -1.34
UBE2D4-211ENST00000491770 PNISRQ8TF01 805 aaKnown RBP6.69□□□□□ -1.34
UBE2D4-211ENST00000491770 TMX4Q9H1E5 349 aaPredicted RBP6.69□□□□□ -1.34
UBE2D4-211ENST00000491770 PIM2Q9P1W9 311 aa6.69□□□□□ -1.34
UBE2D4-211ENST00000491770 TSKSQ9UJT2 592 aa6.69□□□□□ -1.34
UBE2D4-211ENST00000491770 KDM2BQ8NHM5 1336 aa6.69□□□□□ -1.34
UBE2D4-211ENST00000491770 BRCA1P38398 1863 aaKnown RBP6.68□□□□□ -1.34
UBE2D4-211ENST00000491770 TNRC6CQ9HCJ0 1690 aaKnown RBP6.68□□□□□ -1.34
UBE2D4-211ENST00000491770 H0YIN7 160 aa6.68□□□□□ -1.34
UBE2D4-211ENST00000491770 ZEB1P37275 1124 aaPredicted RBP6.68□□□□□ -1.34
UBE2D4-211ENST00000491770 RALBP1Q15311 655 aa6.68□□□□□ -1.34
UBE2D4-211ENST00000491770 VARS2Q5ST30 1063 aaKnown RBP6.68□□□□□ -1.34
UBE2D4-211ENST00000491770 MCM10Q7L590 875 aa6.68□□□□□ -1.34
UBE2D4-211ENST00000491770 DZIP3Q86Y13 1208 aaKnown RBP6.68□□□□□ -1.34
UBE2D4-211ENST00000491770 ZNF622Q969S3 477 aaKnown RBP eCLIP6.68□□□□□ -1.34
UBE2D4-211ENST00000491770 RSPH6AQ9H0K4 717 aa6.68□□□□□ -1.34
UBE2D4-211ENST00000491770 LGR6Q9HBX8 967 aa6.68□□□□□ -1.34
UBE2D4-211ENST00000491770 NARFQ9UHQ1 456 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms