RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 LILRB5O75023 590 aa3.45□□□□□ -1.86
SNRNP40-207ENST00000491106 RGS9O75916 674 aaPredicted RBP3.45□□□□□ -1.86
SNRNP40-207ENST00000491106 FURINP09958 794 aa3.45□□□□□ -1.86
SNRNP40-207ENST00000491106 ADH7P40394 386 aa3.45□□□□□ -1.86
SNRNP40-207ENST00000491106 EPHA4P54764 986 aa3.45□□□□□ -1.86
SNRNP40-207ENST00000491106 AAMPQ13685 434 aa3.45□□□□□ -1.86
SNRNP40-207ENST00000491106 CCINQ13939 588 aa3.45□□□□□ -1.86
SNRNP40-207ENST00000491106 NAA30Q147X3 362 aaPredicted RBP3.45□□□□□ -1.86
SNRNP40-207ENST00000491106 KANK4Q5T7N3 995 aaPredicted RBP3.45□□□□□ -1.86
SNRNP40-207ENST00000491106 ALYREFQ86V81 257 aaKnown RBP3.45□□□□□ -1.86
SNRNP40-207ENST00000491106 IFT43Q96FT9 208 aa3.45□□□□□ -1.86
SNRNP40-207ENST00000491106 SPOCK3Q9BQ16 436 aa3.45□□□□□ -1.86
SNRNP40-207ENST00000491106 C2orf49Q9BVC5 232 aaPredicted RBP3.45□□□□□ -1.86
SNRNP40-207ENST00000491106 ZMYND15Q9H091 742 aa3.45□□□□□ -1.86
SNRNP40-207ENST00000491106 JPH1Q9HDC5 661 aaPredicted RBP3.45□□□□□ -1.86
SNRNP40-207ENST00000491106 AVENQ9NQS1 362 aaPredicted RBP3.45□□□□□ -1.86
SNRNP40-207ENST00000491106 KLF15Q9UIH9 416 aa3.45□□□□□ -1.86
SNRNP40-207ENST00000491106 NOVA2Q9UNW9 492 aaKnown RBP3.45□□□□□ -1.86
SNRNP40-207ENST00000491106 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.45□□□□□ -1.86
SNRNP40-207ENST00000491106 GPC6Q9Y625 555 aaPredicted RBP3.45□□□□□ -1.86
SNRNP40-207ENST00000491106 KRBA1A5PL33 1030 aa3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 FAM196BA6NMK8 535 aa3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 FAM177BA6PVY3 158 aa3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 C1QTNF9BB2RNN3 333 aa3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 FAM229AH3BQW9 127 aa3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 EFSO43281 561 aa3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 C21orf2O43822 256 aa3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 SIN3BO75182 1162 aa3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 SASH3O75995 380 aa3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 MICAL2O94851 1124 aa3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 RARAP10276 462 aa3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 CPB1P15086 417 aa3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 NFKB1P19838 968 aa3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 IGFBP4P22692 258 aa3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 GATA4P43694 442 aa3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 GSK3AP49840 483 aa3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 IDH3AP50213 366 aa3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 MLLT1Q03111 559 aaPredicted RBP3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 DOC2BQ14184 412 aa3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 PCSK7Q16549 785 aa3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 RTN1Q16799 776 aa3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 C11orf91Q3C1V1 193 aa3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 ELMSAN1Q6PJG2 1045 aa3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 LINC00114Q6XXX2 140 aa3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 C8orf86Q6ZUL3 223 aa3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 HFE2Q6ZVN8 426 aa3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 FAM35AQ86V20 835 aa3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 RGL4Q8IZJ4 473 aa3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 MKNK1Q9BUB5 465 aa3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 RBSNQ9H1K0 784 aa3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 USP21Q9UK80 565 aa3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 GTF3C3Q9Y5Q9 886 aa3.44□□□□□ -1.86
SNRNP40-207ENST00000491106 ARID3CA6NKF2 412 aa3.43□□□□□ -1.86
SNRNP40-207ENST00000491106 TARSP26639 723 aaKnown RBP3.43□□□□□ -1.86
SNRNP40-207ENST00000491106 COL8A1P27658 744 aa3.43□□□□□ -1.86
SNRNP40-207ENST00000491106 RAC1P63000 192 aa3.43□□□□□ -1.86
SNRNP40-207ENST00000491106 PSAPL1Q6NUJ1 521 aa3.43□□□□□ -1.86
SNRNP40-207ENST00000491106 DMRTC2Q8IXT2 367 aaPredicted RBP3.43□□□□□ -1.86
SNRNP40-207ENST00000491106 SEMA6BQ9H3T3 888 aa3.43□□□□□ -1.86
SNRNP40-207ENST00000491106 USP20Q9Y2K6 914 aa3.43□□□□□ -1.86
SNRNP40-207ENST00000491106 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.42□□□□□ -1.86
SNRNP40-207ENST00000491106 K7ELQ4 463 aaPredicted RBP3.42□□□□□ -1.86
SNRNP40-207ENST00000491106 FOXO3O43524 673 aa3.42□□□□□ -1.86
SNRNP40-207ENST00000491106 GHRHP01286 108 aa3.42□□□□□ -1.86
SNRNP40-207ENST00000491106 SPATA31C1P0DKV0 1188 aa3.42□□□□□ -1.86
SNRNP40-207ENST00000491106 EIF2AK2P19525 551 aaKnown RBP3.42□□□□□ -1.86
SNRNP40-207ENST00000491106 BRD2P25440 801 aaKnown RBP3.42□□□□□ -1.86
SNRNP40-207ENST00000491106 BAG6P46379 1132 aa3.42□□□□□ -1.86
SNRNP40-207ENST00000491106 ARSDP51689 593 aa3.42□□□□□ -1.86
SNRNP40-207ENST00000491106 HIRAP54198 1017 aaPredicted RBP3.42□□□□□ -1.86
SNRNP40-207ENST00000491106 TYRO3Q06418 890 aa3.42□□□□□ -1.86
SNRNP40-207ENST00000491106 GRIK4Q16099 956 aa3.42□□□□□ -1.86
SNRNP40-207ENST00000491106 ZNF295-AS1Q8N0V1 137 aa3.42□□□□□ -1.86
SNRNP40-207ENST00000491106 STAG2Q8N3U4 1231 aa3.42□□□□□ -1.86
SNRNP40-207ENST00000491106 SPACA7Q96KW9 195 aa3.42□□□□□ -1.86
SNRNP40-207ENST00000491106 NACC1Q96RE7 527 aa3.42□□□□□ -1.86
SNRNP40-207ENST00000491106 GSX2Q9BZM3 304 aa3.42□□□□□ -1.86
SNRNP40-207ENST00000491106 DNAJB12Q9NXW2 375 aaKnown RBP3.42□□□□□ -1.86
SNRNP40-207ENST00000491106 SERPINA10Q9UK55 444 aa3.42□□□□□ -1.86
SNRNP40-207ENST00000491106 ADARB2-AS1A8MUL3 147 aa3.41□□□□□ -1.86
SNRNP40-207ENST00000491106 TGFBR3LH3BV60 316 aa3.41□□□□□ -1.86
SNRNP40-207ENST00000491106 XYLBO75191 536 aa3.41□□□□□ -1.86
SNRNP40-207ENST00000491106 ALBP02768 609 aa3.41□□□□□ -1.86
SNRNP40-207ENST00000491106 PSAPP07602 524 aa3.41□□□□□ -1.86
SNRNP40-207ENST00000491106 SCNN1AP37088 669 aa3.41□□□□□ -1.86
SNRNP40-207ENST00000491106 DGKGP49619 791 aa3.41□□□□□ -1.86
SNRNP40-207ENST00000491106 CFAP70Q5T0N1 1121 aa3.41□□□□□ -1.86
SNRNP40-207ENST00000491106 TTC39BQ5VTQ0 682 aaPredicted RBP3.41□□□□□ -1.86
SNRNP40-207ENST00000491106 GDF6Q6KF10 455 aaPredicted RBP3.41□□□□□ -1.86
SNRNP40-207ENST00000491106 C14orf37Q86TY3 774 aa3.41□□□□□ -1.86
SNRNP40-207ENST00000491106 CD163Q86VB7 1156 aa3.41□□□□□ -1.86
SNRNP40-207ENST00000491106 TREML1Q86YW5 311 aa3.41□□□□□ -1.86
SNRNP40-207ENST00000491106 C7orf43Q8WVR3 580 aa3.41□□□□□ -1.86
SNRNP40-207ENST00000491106 PIK3R5Q8WYR1 880 aa3.41□□□□□ -1.86
SNRNP40-207ENST00000491106 TRIM11Q96F44 468 aa3.41□□□□□ -1.86
SNRNP40-207ENST00000491106 FAM13BQ9NYF5 915 aa3.41□□□□□ -1.86
SNRNP40-207ENST00000491106 SLC6A14Q9UN76 642 aa3.41□□□□□ -1.86
SNRNP40-207ENST00000491106 FNDC3AQ9Y2H6 1198 aaKnown RBP3.41□□□□□ -1.86
SNRNP40-207ENST00000491106 RTCBQ9Y3I0 505 aaKnown RBP3.41□□□□□ -1.86
SNRNP40-207ENST00000491106 SCO2A0A1W2PP80 73 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms