RNA–Protein interactions for RNA: ENST00000489857.5

FAM3D-204, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-204ENST00000489857 KIF6Q6ZMV9 814 aa19.89■□□□□ 0.77
FAM3D-204ENST00000489857 GPC2Q8N158 579 aa19.89■□□□□ 0.77
FAM3D-204ENST00000489857 ZBTB3Q9H5J0 574 aa19.89■□□□□ 0.77
FAM3D-204ENST00000489857 IBTKQ9P2D0 1353 aaPredicted RBP19.89■□□□□ 0.77
FAM3D-204ENST00000489857 DLG5Q8TDM6 1919 aa19.88■□□□□ 0.77
FAM3D-204ENST00000489857 NEFMP07197 916 aa19.88■□□□□ 0.77
FAM3D-204ENST00000489857 NFE2L2Q16236 605 aa19.88■□□□□ 0.77
FAM3D-204ENST00000489857 SUSD4Q5VX71 490 aa19.88■□□□□ 0.77
FAM3D-204ENST00000489857 MAP1SQ66K74 1059 aaPredicted RBP19.88■□□□□ 0.77
FAM3D-204ENST00000489857 CC2D2BQ6DHV5 1058 aa19.88■□□□□ 0.77
FAM3D-204ENST00000489857 PNMA8AQ86V59 439 aaPredicted RBP19.88■□□□□ 0.77
FAM3D-204ENST00000489857 NUP98P52948 1817 aa19.88■□□□□ 0.77
FAM3D-204ENST00000489857 CNTROBQ8N137 903 aa19.87■□□□□ 0.77
FAM3D-204ENST00000489857 JDP2Q8WYK2 163 aa19.87■□□□□ 0.77
FAM3D-204ENST00000489857 RPGRQ92834 1020 aaKnown RBP19.87■□□□□ 0.77
FAM3D-204ENST00000489857 NTSR2O95665 410 aa19.86■□□□□ 0.77
FAM3D-204ENST00000489857 C3orf67Q6ZVT6 689 aa19.86■□□□□ 0.77
FAM3D-204ENST00000489857 ZNF34Q8IZ26 560 aa19.86■□□□□ 0.77
FAM3D-204ENST00000489857 GJA3Q9Y6H8 435 aa19.85■□□□□ 0.77
FAM3D-204ENST00000489857 RASSF10A6NK89 507 aa19.84■□□□□ 0.77
FAM3D-204ENST00000489857 EIF6P56537 245 aaKnown RBP19.84■□□□□ 0.77
FAM3D-204ENST00000489857 GIGYF2Q6Y7W6 1299 aaKnown RBP19.84■□□□□ 0.77
FAM3D-204ENST00000489857 CRAMP1Q96RY5 1269 aa19.84■□□□□ 0.77
FAM3D-204ENST00000489857 PRDM10Q9NQV6 1147 aa19.84■□□□□ 0.77
FAM3D-204ENST00000489857 LTBP1Q14766 1721 aa19.84■□□□□ 0.77
FAM3D-204ENST00000489857 ERBB4Q15303 1308 aa19.83■□□□□ 0.77
FAM3D-204ENST00000489857 TCERG1O14776 1098 aaKnown RBP19.83■□□□□ 0.77
FAM3D-204ENST00000489857 PPEF1O14829 653 aaPredicted RBP19.83■□□□□ 0.77
FAM3D-204ENST00000489857 LRP10Q7Z4F1 713 aa19.83■□□□□ 0.77
FAM3D-204ENST00000489857 LARGE2Q8N3Y3 721 aa19.83■□□□□ 0.77
FAM3D-204ENST00000489857 RBM17Q96I25 401 aaKnown RBP19.83■□□□□ 0.77
FAM3D-204ENST00000489857 WBP1LQ9NX94 342 aa19.83■□□□□ 0.77
FAM3D-204ENST00000489857 CTCFP49711 727 aaPredicted RBP19.82■□□□□ 0.76
FAM3D-204ENST00000489857 SCNN1DP51172 638 aa19.82■□□□□ 0.76
FAM3D-204ENST00000489857 PDIA6Q15084 440 aa19.82■□□□□ 0.76
FAM3D-204ENST00000489857 AIDAQ96BJ3 306 aa19.82■□□□□ 0.76
FAM3D-204ENST00000489857 EPS15P42566 896 aa19.81■□□□□ 0.76
FAM3D-204ENST00000489857 DEFB115Q30KQ5 88 aa19.81■□□□□ 0.76
FAM3D-204ENST00000489857 GRIPAP1Q4V328 841 aa19.81■□□□□ 0.76
FAM3D-204ENST00000489857 MAPK8IP3Q9UPT6 1336 aa19.8■□□□□ 0.76
FAM3D-204ENST00000489857 LMOD1P29536 600 aaPredicted RBP19.8■□□□□ 0.76
FAM3D-204ENST00000489857 FMR1Q06787 632 aaKnown RBP eCLIP19.8■□□□□ 0.76
FAM3D-204ENST00000489857 PARP10Q53GL7 1025 aa19.8■□□□□ 0.76
FAM3D-204ENST00000489857 DDX21Q9NR30 783 aaKnown RBP eCLIP19.8■□□□□ 0.76
FAM3D-204ENST00000489857 PROSER3Q2NL68 480 aa19.79■□□□□ 0.76
FAM3D-204ENST00000489857 PPP1R42Q7Z4L9 355 aa19.79■□□□□ 0.76
FAM3D-204ENST00000489857 TSPYL4Q9UJ04 414 aa19.79■□□□□ 0.76
FAM3D-204ENST00000489857 ABT1Q9ULW3 272 aaKnown RBP19.79■□□□□ 0.76
FAM3D-204ENST00000489857 ANXA1P04083 346 aa19.78■□□□□ 0.76
FAM3D-204ENST00000489857 EIF2S2P20042 333 aaKnown RBP19.78■□□□□ 0.76
FAM3D-204ENST00000489857 LBX1P52954 281 aa19.78■□□□□ 0.76
FAM3D-204ENST00000489857 SLC10A5Q5PT55 438 aa19.78■□□□□ 0.76
FAM3D-204ENST00000489857 NIM1KQ8IY84 436 aa19.78■□□□□ 0.76
FAM3D-204ENST00000489857 NLRP3Q96P20 1036 aa19.78■□□□□ 0.76
FAM3D-204ENST00000489857 WDR33Q9C0J8 1336 aaKnown RBP19.77■□□□□ 0.76
FAM3D-204ENST00000489857 PPIP5K2O43314 1243 aa19.77■□□□□ 0.76
FAM3D-204ENST00000489857 AOC3Q16853 763 aa19.77■□□□□ 0.76
FAM3D-204ENST00000489857 UTP14AQ9BVJ6 771 aaKnown RBP19.77■□□□□ 0.76
FAM3D-204ENST00000489857 PNNQ9H307 717 aaKnown RBP19.77■□□□□ 0.76
FAM3D-204ENST00000489857 ATP6V0A2Q9Y487 856 aa19.77■□□□□ 0.76
FAM3D-204ENST00000489857 ABCC4O15439 1325 aa19.76■□□□□ 0.75
FAM3D-204ENST00000489857 USP50Q70EL3 339 aaPredicted RBP19.76■□□□□ 0.75
FAM3D-204ENST00000489857 TRAF5O00463 557 aa19.75■□□□□ 0.75
FAM3D-204ENST00000489857 HSPA8P11142 646 aaKnown RBP19.75■□□□□ 0.75
FAM3D-204ENST00000489857 RIPK4P57078 832 aa19.75■□□□□ 0.75
FAM3D-204ENST00000489857 RTFDC1Q9BY42 306 aaPredicted RBP19.74■□□□□ 0.75
FAM3D-204ENST00000489857 MAP2K1Q02750 393 aaPredicted RBP19.73■□□□□ 0.75
FAM3D-204ENST00000489857 CXCL9Q07325 125 aa19.73■□□□□ 0.75
FAM3D-204ENST00000489857 CST9Q5W186 159 aa19.73■□□□□ 0.75
FAM3D-204ENST00000489857 NLRP10Q86W26 655 aa19.73■□□□□ 0.75
FAM3D-204ENST00000489857 NECTIN2Q92692 538 aa19.73■□□□□ 0.75
FAM3D-204ENST00000489857 TMX4Q9H1E5 349 aaPredicted RBP19.73■□□□□ 0.75
FAM3D-204ENST00000489857 VPS33BQ9H267 617 aa19.73■□□□□ 0.75
FAM3D-204ENST00000489857 BABAM1Q9NWV8 329 aa19.73■□□□□ 0.75
FAM3D-204ENST00000489857 GPRC5DQ9NZD1 345 aa19.73■□□□□ 0.75
FAM3D-204ENST00000489857 ZNRF3Q9ULT6 936 aa19.73■□□□□ 0.75
FAM3D-204ENST00000489857 THSD7BQ9C0I4 1608 aa19.73■□□□□ 0.75
FAM3D-204ENST00000489857 HCLS1P14317 486 aaPredicted RBP19.72■□□□□ 0.75
FAM3D-204ENST00000489857 COPS6Q7L5N1 327 aa19.72■□□□□ 0.75
FAM3D-204ENST00000489857 XAGE3Q8WTP9 111 aa19.72■□□□□ 0.75
FAM3D-204ENST00000489857 CAPNS2Q96L46 248 aa19.72■□□□□ 0.75
FAM3D-204ENST00000489857 ADARB2Q9NS39 739 aaKnown RBP19.72■□□□□ 0.75
FAM3D-204ENST00000489857 BBOX1O75936 387 aa19.71■□□□□ 0.75
FAM3D-204ENST00000489857 TMPOP42166 694 aaKnown RBP19.71■□□□□ 0.75
FAM3D-204ENST00000489857 AIMP1Q12904 312 aaKnown RBP19.71■□□□□ 0.75
FAM3D-204ENST00000489857 CYP4F22Q6NT55 531 aa19.71■□□□□ 0.75
FAM3D-204ENST00000489857 SP8Q8IXZ3 490 aa19.71■□□□□ 0.75
FAM3D-204ENST00000489857 SUPT20HQ8NEM7 779 aa19.71■□□□□ 0.75
FAM3D-204ENST00000489857 GMPSP49915 693 aaPredicted RBP19.7■□□□□ 0.74
FAM3D-204ENST00000489857 HSP90AB3PQ58FF7 597 aa19.7■□□□□ 0.74
FAM3D-204ENST00000489857 DPP8Q6V1X1 898 aaPredicted RBP19.7■□□□□ 0.74
FAM3D-204ENST00000489857 PAXIP1Q6ZW49 1069 aaPredicted RBP19.7■□□□□ 0.74
FAM3D-204ENST00000489857 TLL2Q9Y6L7 1015 aa19.7■□□□□ 0.74
FAM3D-204ENST00000489857 KIAA2012Q0VF49 1180 aa19.69■□□□□ 0.74
FAM3D-204ENST00000489857 GRM1Q13255 1194 aa19.69■□□□□ 0.74
FAM3D-204ENST00000489857 TCIRG1Q13488 830 aa19.69■□□□□ 0.74
FAM3D-204ENST00000489857 KRT24Q2M2I5 525 aa19.69■□□□□ 0.74
FAM3D-204ENST00000489857 MPNDQ8N594 471 aa19.69■□□□□ 0.74
FAM3D-204ENST00000489857 TRMT112Q9UI30 125 aaKnown RBP19.69■□□□□ 0.74
FAM3D-204ENST00000489857 LAMB2P55268 1798 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms