RNA–Protein interactions for RNA: ENST00000489687.1

CNOT9-207, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 288 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-207ENST00000489687 NFKBIEO00221 500 aa7.62□□□□□ -1.19
CNOT9-207ENST00000489687 TULP1O00294 542 aaPredicted RBP7.62□□□□□ -1.19
CNOT9-207ENST00000489687 SNRPA1P09661 255 aaKnown RBP7.62□□□□□ -1.19
CNOT9-207ENST00000489687 CD44P16070 742 aaKnown RBP7.62□□□□□ -1.19
CNOT9-207ENST00000489687 HTRA3P83110 453 aa7.62□□□□□ -1.19
CNOT9-207ENST00000489687 NFE2L2Q16236 605 aa7.62□□□□□ -1.19
CNOT9-207ENST00000489687 OLFM4Q6UX06 510 aa7.62□□□□□ -1.19
CNOT9-207ENST00000489687 ZNF622Q969S3 477 aaKnown RBP eCLIP7.62□□□□□ -1.19
CNOT9-207ENST00000489687 PLEKHF1Q96S99 279 aa7.62□□□□□ -1.19
CNOT9-207ENST00000489687 WDR90Q96KV7 1748 aa7.61□□□□□ -1.19
CNOT9-207ENST00000489687 H0YIN7 160 aa7.61□□□□□ -1.19
CNOT9-207ENST00000489687 C21orf2O43822 256 aa7.61□□□□□ -1.19
CNOT9-207ENST00000489687 HLFQ16534 295 aa7.61□□□□□ -1.19
CNOT9-207ENST00000489687 NPM2Q86SE8 214 aaKnown RBP7.61□□□□□ -1.19
CNOT9-207ENST00000489687 NBPF5PQ86XG9 351 aaPredicted RBP7.61□□□□□ -1.19
CNOT9-207ENST00000489687 TTLL6Q8N841 843 aa7.61□□□□□ -1.19
CNOT9-207ENST00000489687 ZNF428Q96B54 188 aa7.61□□□□□ -1.19
CNOT9-207ENST00000489687 SETDB2Q96T68 719 aa7.61□□□□□ -1.19
CNOT9-207ENST00000489687 TEX13AQ9BXU3 409 aaPredicted RBP7.61□□□□□ -1.19
CNOT9-207ENST00000489687 ANXA1P04083 346 aa7.6□□□□□ -1.19
CNOT9-207ENST00000489687 NEFMP07197 916 aa7.6□□□□□ -1.19
CNOT9-207ENST00000489687 MYL6BP14649 208 aa7.6□□□□□ -1.19
CNOT9-207ENST00000489687 HSPA6P17066 643 aa7.6□□□□□ -1.19
CNOT9-207ENST00000489687 GPTP24298 496 aa7.6□□□□□ -1.19
CNOT9-207ENST00000489687 ST5P78524 1137 aa7.6□□□□□ -1.19
CNOT9-207ENST00000489687 TAF7Q15545 349 aaPredicted RBP7.6□□□□□ -1.19
CNOT9-207ENST00000489687 KRT24Q2M2I5 525 aa7.6□□□□□ -1.19
CNOT9-207ENST00000489687 PRPF40BQ6NWY9 871 aaKnown RBP7.6□□□□□ -1.19
CNOT9-207ENST00000489687 TTLL7Q6ZT98 887 aa7.6□□□□□ -1.19
CNOT9-207ENST00000489687 NECTIN2Q92692 538 aa7.6□□□□□ -1.19
CNOT9-207ENST00000489687 KIF12Q96FN5 646 aa7.6□□□□□ -1.19
CNOT9-207ENST00000489687 ZBTB3Q9H5J0 574 aa7.6□□□□□ -1.19
CNOT9-207ENST00000489687 NIP7Q9Y221 180 aaKnown RBP eCLIP7.6□□□□□ -1.19
CNOT9-207ENST00000489687 DICER1Q9UPY3 1922 aaKnown RBP7.6□□□□□ -1.19
CNOT9-207ENST00000489687 LMNB1P20700 586 aa7.59□□□□□ -1.19
CNOT9-207ENST00000489687 EIF4A1P60842 406 aaKnown RBP7.59□□□□□ -1.19
CNOT9-207ENST00000489687 NEUROD2Q15784 382 aa7.59□□□□□ -1.19
CNOT9-207ENST00000489687 PROSER3Q2NL68 480 aa7.59□□□□□ -1.19
CNOT9-207ENST00000489687 NUTM1Q86Y26 1132 aa7.59□□□□□ -1.19
CNOT9-207ENST00000489687 BRIP1Q9BX63 1249 aa7.59□□□□□ -1.19
CNOT9-207ENST00000489687 RRAGCQ9HB90 399 aa7.59□□□□□ -1.19
CNOT9-207ENST00000489687 TSPYL4Q9UJ04 414 aa7.59□□□□□ -1.19
CNOT9-207ENST00000489687 ANKRD36CQ5JPF3 1778 aa7.59□□□□□ -1.2
CNOT9-207ENST00000489687 UBN2Q6ZU65 1347 aa7.58□□□□□ -1.2
CNOT9-207ENST00000489687 MYBBP1AQ9BQG0 1328 aaKnown RBP7.58□□□□□ -1.2
CNOT9-207ENST00000489687 HTATSF1O43719 755 aaKnown RBP7.58□□□□□ -1.2
CNOT9-207ENST00000489687 SRGNP10124 158 aa7.58□□□□□ -1.2
CNOT9-207ENST00000489687 DEKP35659 375 aaKnown RBP7.58□□□□□ -1.2
CNOT9-207ENST00000489687 PDE6BP35913 854 aa7.58□□□□□ -1.2
CNOT9-207ENST00000489687 RIPK4P57078 832 aa7.58□□□□□ -1.2
CNOT9-207ENST00000489687 C3orf67Q6ZVT6 689 aa7.58□□□□□ -1.2
CNOT9-207ENST00000489687 ZNF652Q9Y2D9 606 aa7.58□□□□□ -1.2
CNOT9-207ENST00000489687 LAMB2P55268 1798 aa7.58□□□□□ -1.2
CNOT9-207ENST00000489687 COL4A5P29400 1685 aa7.57□□□□□ -1.2
CNOT9-207ENST00000489687 KDM2BQ8NHM5 1336 aa7.57□□□□□ -1.2
CNOT9-207ENST00000489687 TOMM70O94826 608 aa7.57□□□□□ -1.2
CNOT9-207ENST00000489687 EIF2S2P20042 333 aaKnown RBP7.57□□□□□ -1.2
CNOT9-207ENST00000489687 TMPOP42166 694 aaKnown RBP7.57□□□□□ -1.2
CNOT9-207ENST00000489687 RALBP1Q15311 655 aa7.57□□□□□ -1.2
CNOT9-207ENST00000489687 C16orf71Q8IYS4 520 aaPredicted RBP7.57□□□□□ -1.2
CNOT9-207ENST00000489687 PKNOX2Q96KN3 472 aa7.57□□□□□ -1.2
CNOT9-207ENST00000489687 TAOK3Q9H2K8 898 aa7.57□□□□□ -1.2
CNOT9-207ENST00000489687 LAS1LQ9Y4W2 734 aaKnown RBP7.57□□□□□ -1.2
CNOT9-207ENST00000489687 MAP3K15Q6ZN16 1313 aa7.56□□□□□ -1.2
CNOT9-207ENST00000489687 TAF1P21675 1872 aa7.56□□□□□ -1.2
CNOT9-207ENST00000489687 TCERG1O14776 1098 aaKnown RBP7.56□□□□□ -1.2
CNOT9-207ENST00000489687 POTEIP0CG38 1075 aa7.56□□□□□ -1.2
CNOT9-207ENST00000489687 POTEJP0CG39 1038 aa7.56□□□□□ -1.2
CNOT9-207ENST00000489687 WDR43Q15061 677 aaKnown RBP eCLIP7.56□□□□□ -1.2
CNOT9-207ENST00000489687 ERFEQ4G0M1 354 aa7.56□□□□□ -1.2
CNOT9-207ENST00000489687 STYK1Q6J9G0 422 aa7.56□□□□□ -1.2
CNOT9-207ENST00000489687 KIF6Q6ZMV9 814 aa7.56□□□□□ -1.2
CNOT9-207ENST00000489687 MASTLQ96GX5 879 aa7.56□□□□□ -1.2
CNOT9-207ENST00000489687 ZNF277Q9NRM2 450 aaPredicted RBP7.56□□□□□ -1.2
CNOT9-207ENST00000489687 PCDHB8Q9UN66 801 aa7.56□□□□□ -1.2
CNOT9-207ENST00000489687 ZNF541Q9H0D2 1346 aa7.55□□□□□ -1.2
CNOT9-207ENST00000489687 COL4A1P02462 1669 aa7.55□□□□□ -1.2
CNOT9-207ENST00000489687 MAP3K13O43283 966 aa7.55□□□□□ -1.2
CNOT9-207ENST00000489687 GTF2E1P29083 439 aaPredicted RBP7.55□□□□□ -1.2
CNOT9-207ENST00000489687 AIMP1Q12904 312 aaKnown RBP7.55□□□□□ -1.2
CNOT9-207ENST00000489687 MKRN3Q13064 507 aaKnown RBP7.55□□□□□ -1.2
CNOT9-207ENST00000489687 CLEC4GQ6UXB4 293 aa7.55□□□□□ -1.2
CNOT9-207ENST00000489687 RBM46Q8TBY0 533 aaKnown RBP7.55□□□□□ -1.2
CNOT9-207ENST00000489687 PNISRQ8TF01 805 aaKnown RBP7.55□□□□□ -1.2
CNOT9-207ENST00000489687 CNKSR1Q969H4 720 aa7.55□□□□□ -1.2
CNOT9-207ENST00000489687 SNED1Q8TER0 1413 aa7.54□□□□□ -1.2
CNOT9-207ENST00000489687 GLTPD2A6NH11 291 aa7.54□□□□□ -1.2
CNOT9-207ENST00000489687 DDNO94850 711 aaPredicted RBP7.54□□□□□ -1.2
CNOT9-207ENST00000489687 NTSR2O95665 410 aa7.54□□□□□ -1.2
CNOT9-207ENST00000489687 NPR1P16066 1061 aa7.54□□□□□ -1.2
CNOT9-207ENST00000489687 APLP1P51693 650 aa7.54□□□□□ -1.2
CNOT9-207ENST00000489687 PDIA6Q15084 440 aa7.54□□□□□ -1.2
CNOT9-207ENST00000489687 CCDC93Q567U6 631 aa7.54□□□□□ -1.2
CNOT9-207ENST00000489687 SUSD4Q5VX71 490 aa7.54□□□□□ -1.2
CNOT9-207ENST00000489687 LRP10Q7Z4F1 713 aa7.54□□□□□ -1.2
CNOT9-207ENST00000489687 IFNL1Q8IU54 200 aa7.54□□□□□ -1.2
CNOT9-207ENST00000489687 SYNE4Q8N205 404 aa7.54□□□□□ -1.2
CNOT9-207ENST00000489687 XAGE3Q8WTP9 111 aa7.54□□□□□ -1.2
CNOT9-207ENST00000489687 C7orf43Q8WVR3 580 aa7.54□□□□□ -1.2
CNOT9-207ENST00000489687 CHPF2Q9P2E5 772 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms