RNA–Protein interactions for RNA: ENST00000489551.5

CSF3R-213, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 1 (best)

Gene CSF3R, Length 787 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-213ENST00000489551 PNISRQ8TF01 805 aaKnown RBP13.34□□□□□ -0.27
CSF3R-213ENST00000489551 PSMD1Q99460 953 aa13.34□□□□□ -0.27
CSF3R-213ENST00000489551 RNF123Q5XPI4 1314 aa13.34□□□□□ -0.27
CSF3R-213ENST00000489551 TRPM7Q96QT4 1865 aa13.33□□□□□ -0.27
CSF3R-213ENST00000489551 CNTNAP1P78357 1384 aa13.33□□□□□ -0.27
CSF3R-213ENST00000489551 IBTKQ9P2D0 1353 aaPredicted RBP13.33□□□□□ -0.27
CSF3R-213ENST00000489551 CAPN15O75808 1086 aa13.33□□□□□ -0.28
CSF3R-213ENST00000489551 GTF2E1P29083 439 aaPredicted RBP13.33□□□□□ -0.28
CSF3R-213ENST00000489551 EPHX2P34913 555 aa13.33□□□□□ -0.28
CSF3R-213ENST00000489551 PROSER3Q2NL68 480 aa13.33□□□□□ -0.28
CSF3R-213ENST00000489551 EAPPQ56P03 285 aaPredicted RBP13.33□□□□□ -0.28
CSF3R-213ENST00000489551 GIGYF2Q6Y7W6 1299 aaKnown RBP13.33□□□□□ -0.28
CSF3R-213ENST00000489551 HACL1Q9UJ83 578 aa13.33□□□□□ -0.28
CSF3R-213ENST00000489551 ANXA1P04083 346 aa13.32□□□□□ -0.28
CSF3R-213ENST00000489551 NYXQ9GZU5 481 aa13.32□□□□□ -0.28
CSF3R-213ENST00000489551 FOXN1O15353 648 aa13.31□□□□□ -0.28
CSF3R-213ENST00000489551 VEGFBP49765 207 aa13.31□□□□□ -0.28
CSF3R-213ENST00000489551 FMR1Q06787 632 aaKnown RBP eCLIP13.31□□□□□ -0.28
CSF3R-213ENST00000489551 MAP1SQ66K74 1059 aaPredicted RBP13.31□□□□□ -0.28
CSF3R-213ENST00000489551 KIF6Q6ZMV9 814 aa13.31□□□□□ -0.28
CSF3R-213ENST00000489551 GPC2Q8N158 579 aa13.31□□□□□ -0.28
CSF3R-213ENST00000489551 DDX60Q8IY21 1712 aaKnown RBP13.3□□□□□ -0.28
CSF3R-213ENST00000489551 TCERG1O14776 1098 aaKnown RBP13.3□□□□□ -0.28
CSF3R-213ENST00000489551 CRAMP1Q96RY5 1269 aa13.3□□□□□ -0.28
CSF3R-213ENST00000489551 COL4A1P02462 1669 aa13.29□□□□□ -0.28
CSF3R-213ENST00000489551 TMEM88BA6NKF7 163 aa13.29□□□□□ -0.28
CSF3R-213ENST00000489551 NEFMP07197 916 aa13.29□□□□□ -0.28
CSF3R-213ENST00000489551 EIF2S2P20042 333 aaKnown RBP13.29□□□□□ -0.28
CSF3R-213ENST00000489551 EPS15P42566 896 aa13.29□□□□□ -0.28
CSF3R-213ENST00000489551 SCNN1DP51172 638 aa13.29□□□□□ -0.28
CSF3R-213ENST00000489551 CNTROBQ8N137 903 aa13.29□□□□□ -0.28
CSF3R-213ENST00000489551 RPGRQ92834 1020 aaKnown RBP13.29□□□□□ -0.28
CSF3R-213ENST00000489551 TSPYL4Q9UJ04 414 aa13.29□□□□□ -0.28
CSF3R-213ENST00000489551 CLEC11AQ9Y240 323 aa13.29□□□□□ -0.28
CSF3R-213ENST00000489551 ERBB4Q15303 1308 aa13.29□□□□□ -0.28
CSF3R-213ENST00000489551 PPEF1O14829 653 aaPredicted RBP13.28□□□□□ -0.28
CSF3R-213ENST00000489551 RIPK4P57078 832 aa13.28□□□□□ -0.28
CSF3R-213ENST00000489551 KRT24Q2M2I5 525 aa13.28□□□□□ -0.28
CSF3R-213ENST00000489551 SLC10A5Q5PT55 438 aa13.28□□□□□ -0.28
CSF3R-213ENST00000489551 CC2D2BQ6DHV5 1058 aa13.28□□□□□ -0.28
CSF3R-213ENST00000489551 RBM17Q96I25 401 aaKnown RBP13.28□□□□□ -0.28
CSF3R-213ENST00000489551 GJA3Q9Y6H8 435 aa13.28□□□□□ -0.28
CSF3R-213ENST00000489551 POLR2AP24928 1970 aaKnown RBP13.28□□□□□ -0.28
CSF3R-213ENST00000489551 TMPOP42166 694 aaKnown RBP13.27□□□□□ -0.29
CSF3R-213ENST00000489551 PNMA8AQ86V59 439 aaPredicted RBP13.27□□□□□ -0.29
CSF3R-213ENST00000489551 JDP2Q8WYK2 163 aa13.27□□□□□ -0.29
CSF3R-213ENST00000489551 NECTIN2Q92692 538 aa13.27□□□□□ -0.29
CSF3R-213ENST00000489551 ABCC4O15439 1325 aa13.27□□□□□ -0.29
CSF3R-213ENST00000489551 MAPK8IP3Q9UPT6 1336 aa13.27□□□□□ -0.29
CSF3R-213ENST00000489551 THSD7BQ9C0I4 1608 aa13.27□□□□□ -0.29
CSF3R-213ENST00000489551 LRRC37AA6NMS7 1700 aa13.27□□□□□ -0.29
CSF3R-213ENST00000489551 RASSF10A6NK89 507 aa13.26□□□□□ -0.29
CSF3R-213ENST00000489551 AOC3Q16853 763 aa13.26□□□□□ -0.29
CSF3R-213ENST00000489551 PARP10Q53GL7 1025 aa13.26□□□□□ -0.29
CSF3R-213ENST00000489551 PPP1R42Q7Z4L9 355 aa13.26□□□□□ -0.29
CSF3R-213ENST00000489551 LARGE2Q8N3Y3 721 aa13.26□□□□□ -0.29
CSF3R-213ENST00000489551 DUOX1Q9NRD9 1551 aa13.26□□□□□ -0.29
CSF3R-213ENST00000489551 WBP1LQ9NX94 342 aa13.26□□□□□ -0.29
CSF3R-213ENST00000489551 EIF6P56537 245 aaKnown RBP13.25□□□□□ -0.29
CSF3R-213ENST00000489551 COPS6Q7L5N1 327 aa13.25□□□□□ -0.29
CSF3R-213ENST00000489551 NLRP10Q86W26 655 aa13.25□□□□□ -0.29
CSF3R-213ENST00000489551 XAGE3Q8WTP9 111 aa13.25□□□□□ -0.29
CSF3R-213ENST00000489551 ZNF428Q96B54 188 aa13.25□□□□□ -0.29
CSF3R-213ENST00000489551 NLRP3Q96P20 1036 aa13.25□□□□□ -0.29
CSF3R-213ENST00000489551 UTP14AQ9BVJ6 771 aaKnown RBP13.25□□□□□ -0.29
CSF3R-213ENST00000489551 DDX21Q9NR30 783 aaKnown RBP eCLIP13.25□□□□□ -0.29
CSF3R-213ENST00000489551 ATP6V0A2Q9Y487 856 aa13.25□□□□□ -0.29
CSF3R-213ENST00000489551 HCLS1P14317 486 aaPredicted RBP13.24□□□□□ -0.29
CSF3R-213ENST00000489551 AIMP1Q12904 312 aaKnown RBP13.24□□□□□ -0.29
CSF3R-213ENST00000489551 DEFB115Q30KQ5 88 aa13.24□□□□□ -0.29
CSF3R-213ENST00000489551 CST9Q5W186 159 aa13.24□□□□□ -0.29
CSF3R-213ENST00000489551 CCDC146Q8IYE0 955 aa13.24□□□□□ -0.29
CSF3R-213ENST00000489551 RTFDC1Q9BY42 306 aaPredicted RBP13.24□□□□□ -0.29
CSF3R-213ENST00000489551 PNNQ9H307 717 aaKnown RBP13.24□□□□□ -0.29
CSF3R-213ENST00000489551 BABAM1Q9NWV8 329 aa13.24□□□□□ -0.29
CSF3R-213ENST00000489551 TRIM35Q9UPQ4 493 aa13.24□□□□□ -0.29
CSF3R-213ENST00000489551 TRAF5O00463 557 aa13.23□□□□□ -0.29
CSF3R-213ENST00000489551 CHL1O00533 1208 aa13.23□□□□□ -0.29
CSF3R-213ENST00000489551 PPIP5K2O43314 1243 aa13.23□□□□□ -0.29
CSF3R-213ENST00000489551 CXCL9Q07325 125 aa13.23□□□□□ -0.29
CSF3R-213ENST00000489551 GRIPAP1Q4V328 841 aa13.23□□□□□ -0.29
CSF3R-213ENST00000489551 PRDM10Q9NQV6 1147 aa13.23□□□□□ -0.29
CSF3R-213ENST00000489551 WDR33Q9C0J8 1336 aaKnown RBP13.22□□□□□ -0.29
CSF3R-213ENST00000489551 TCIRG1Q13488 830 aa13.22□□□□□ -0.29
CSF3R-213ENST00000489551 RALBP1Q15311 655 aa13.22□□□□□ -0.29
CSF3R-213ENST00000489551 NEUROD2Q15784 382 aa13.22□□□□□ -0.29
CSF3R-213ENST00000489551 SP8Q8IXZ3 490 aa13.22□□□□□ -0.29
CSF3R-213ENST00000489551 NIM1KQ8IY84 436 aa13.22□□□□□ -0.29
CSF3R-213ENST00000489551 SCN9AQ15858 1988 aa13.21□□□□□ -0.29
CSF3R-213ENST00000489551 SHTN1A0MZ66 631 aa13.21□□□□□ -0.29
CSF3R-213ENST00000489551 LMOD1P29536 600 aaPredicted RBP13.21□□□□□ -0.29
CSF3R-213ENST00000489551 CTCFP49711 727 aaPredicted RBP13.21□□□□□ -0.29
CSF3R-213ENST00000489551 LBX1P52954 281 aa13.21□□□□□ -0.29
CSF3R-213ENST00000489551 HIRAP54198 1017 aaPredicted RBP13.21□□□□□ -0.29
CSF3R-213ENST00000489551 USP50Q70EL3 339 aaPredicted RBP13.21□□□□□ -0.29
CSF3R-213ENST00000489551 GPRC5DQ9NZD1 345 aa13.21□□□□□ -0.29
CSF3R-213ENST00000489551 ZNRF3Q9ULT6 936 aa13.21□□□□□ -0.29
CSF3R-213ENST00000489551 YDJCA8MPS7 323 aa13.2□□□□□ -0.3
CSF3R-213ENST00000489551 BBOX1O75936 387 aa13.2□□□□□ -0.3
CSF3R-213ENST00000489551 HSPA8P11142 646 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms