RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 GPC2Q8N158 579 aa13.71□□□□□ -0.21
CHKB-211ENST00000489453 ZBTB3Q9H5J0 574 aa13.71□□□□□ -0.21
CHKB-211ENST00000489453 GJA3Q9Y6H8 435 aa13.71□□□□□ -0.21
CHKB-211ENST00000489453 IBTKQ9P2D0 1353 aaPredicted RBP13.71□□□□□ -0.22
CHKB-211ENST00000489453 PASKQ96RG2 1323 aa13.7□□□□□ -0.22
CHKB-211ENST00000489453 TTLL7Q6ZT98 887 aa13.7□□□□□ -0.22
CHKB-211ENST00000489453 RBM17Q96I25 401 aaKnown RBP13.7□□□□□ -0.22
CHKB-211ENST00000489453 PSMD1Q99460 953 aa13.7□□□□□ -0.22
CHKB-211ENST00000489453 FZD9O00144 591 aa13.69□□□□□ -0.22
CHKB-211ENST00000489453 EIF4A1P60842 406 aaKnown RBP13.69□□□□□ -0.22
CHKB-211ENST00000489453 CRY2Q49AN0 593 aa13.69□□□□□ -0.22
CHKB-211ENST00000489453 GRIPAP1Q4V328 841 aa13.69□□□□□ -0.22
CHKB-211ENST00000489453 LARGE2Q8N3Y3 721 aa13.69□□□□□ -0.22
CHKB-211ENST00000489453 THUMPD2Q9BTF0 503 aaKnown RBP13.69□□□□□ -0.22
CHKB-211ENST00000489453 RIC1Q4ADV7 1423 aa13.69□□□□□ -0.22
CHKB-211ENST00000489453 TCERG1O14776 1098 aaKnown RBP13.68□□□□□ -0.22
CHKB-211ENST00000489453 PPEF1O14829 653 aaPredicted RBP13.68□□□□□ -0.22
CHKB-211ENST00000489453 PPP1R42Q7Z4L9 355 aa13.68□□□□□ -0.22
CHKB-211ENST00000489453 CNTROBQ8N137 903 aa13.68□□□□□ -0.22
CHKB-211ENST00000489453 ABT1Q9ULW3 272 aaKnown RBP13.68□□□□□ -0.22
CHKB-211ENST00000489453 LAMB2P55268 1798 aa13.68□□□□□ -0.22
CHKB-211ENST00000489453 ERBB4Q15303 1308 aa13.67□□□□□ -0.22
CHKB-211ENST00000489453 UBN2Q6ZU65 1347 aa13.67□□□□□ -0.22
CHKB-211ENST00000489453 FOXN1O15353 648 aa13.67□□□□□ -0.22
CHKB-211ENST00000489453 ITGBL1O95965 494 aaPredicted RBP13.67□□□□□ -0.22
CHKB-211ENST00000489453 HOXA10P31260 410 aaPredicted RBP13.67□□□□□ -0.22
CHKB-211ENST00000489453 CTCFP49711 727 aaPredicted RBP13.67□□□□□ -0.22
CHKB-211ENST00000489453 VEGFBP49765 207 aa13.67□□□□□ -0.22
CHKB-211ENST00000489453 PARP10Q53GL7 1025 aa13.67□□□□□ -0.22
CHKB-211ENST00000489453 SUSD4Q5VX71 490 aa13.67□□□□□ -0.22
CHKB-211ENST00000489453 MAP1SQ66K74 1059 aaPredicted RBP13.67□□□□□ -0.22
CHKB-211ENST00000489453 NIM1KQ8IY84 436 aa13.67□□□□□ -0.22
CHKB-211ENST00000489453 PLEKHF1Q96S99 279 aa13.67□□□□□ -0.22
CHKB-211ENST00000489453 TSPYL4Q9UJ04 414 aa13.67□□□□□ -0.22
CHKB-211ENST00000489453 EIF2S2P20042 333 aaKnown RBP13.66□□□□□ -0.22
CHKB-211ENST00000489453 NLRP3Q96P20 1036 aa13.66□□□□□ -0.22
CHKB-211ENST00000489453 CRAMP1Q96RY5 1269 aa13.66□□□□□ -0.22
CHKB-211ENST00000489453 SNED1Q8TER0 1413 aa13.65□□□□□ -0.22
CHKB-211ENST00000489453 LTBP1Q14766 1721 aa13.65□□□□□ -0.22
CHKB-211ENST00000489453 PPIP5K2O43314 1243 aa13.65□□□□□ -0.22
CHKB-211ENST00000489453 NTSR2O95665 410 aa13.65□□□□□ -0.22
CHKB-211ENST00000489453 DEFB115Q30KQ5 88 aa13.65□□□□□ -0.22
CHKB-211ENST00000489453 GIGYF2Q6Y7W6 1299 aaKnown RBP13.65□□□□□ -0.22
CHKB-211ENST00000489453 PAXIP1Q6ZW49 1069 aaPredicted RBP13.65□□□□□ -0.22
CHKB-211ENST00000489453 ZNF34Q8IZ26 560 aa13.65□□□□□ -0.22
CHKB-211ENST00000489453 UTP14AQ9BVJ6 771 aaKnown RBP13.65□□□□□ -0.22
CHKB-211ENST00000489453 PRDM10Q9NQV6 1147 aa13.65□□□□□ -0.22
CHKB-211ENST00000489453 COL4A5P29400 1685 aa13.65□□□□□ -0.22
CHKB-211ENST00000489453 LMOD3Q0VAK6 560 aa13.64□□□□□ -0.23
CHKB-211ENST00000489453 RASSF10A6NK89 507 aa13.63□□□□□ -0.23
CHKB-211ENST00000489453 RIPK4P57078 832 aa13.63□□□□□ -0.23
CHKB-211ENST00000489453 HSP90AB3PQ58FF7 597 aa13.63□□□□□ -0.23
CHKB-211ENST00000489453 SUPT20HQ8NEM7 779 aa13.63□□□□□ -0.23
CHKB-211ENST00000489453 TAF1P21675 1872 aa13.63□□□□□ -0.23
CHKB-211ENST00000489453 MAP2K1Q02750 393 aaPredicted RBP13.62□□□□□ -0.23
CHKB-211ENST00000489453 AOC3Q16853 763 aa13.62□□□□□ -0.23
CHKB-211ENST00000489453 USP50Q70EL3 339 aaPredicted RBP13.62□□□□□ -0.23
CHKB-211ENST00000489453 DDX21Q9NR30 783 aaKnown RBP eCLIP13.62□□□□□ -0.23
CHKB-211ENST00000489453 WDR33Q9C0J8 1336 aaKnown RBP13.62□□□□□ -0.23
CHKB-211ENST00000489453 EPS15P42566 896 aa13.61□□□□□ -0.23
CHKB-211ENST00000489453 SCNN1DP51172 638 aa13.61□□□□□ -0.23
CHKB-211ENST00000489453 LBX1P52954 281 aa13.61□□□□□ -0.23
CHKB-211ENST00000489453 AIMP1Q12904 312 aaKnown RBP13.61□□□□□ -0.23
CHKB-211ENST00000489453 GRM1Q13255 1194 aa13.61□□□□□ -0.23
CHKB-211ENST00000489453 C3orf67Q6ZVT6 689 aa13.61□□□□□ -0.23
CHKB-211ENST00000489453 NECTIN2Q92692 538 aa13.61□□□□□ -0.23
CHKB-211ENST00000489453 BEGAINQ9BUH8 593 aa13.61□□□□□ -0.23
CHKB-211ENST00000489453 WBP1LQ9NX94 342 aa13.61□□□□□ -0.23
CHKB-211ENST00000489453 ATP6V0A2Q9Y487 856 aa13.61□□□□□ -0.23
CHKB-211ENST00000489453 ABCC4O15439 1325 aa13.61□□□□□ -0.23
CHKB-211ENST00000489453 ANXA1P04083 346 aa13.6□□□□□ -0.23
CHKB-211ENST00000489453 ECE1P42892 770 aa13.6□□□□□ -0.23
CHKB-211ENST00000489453 DPP8Q6V1X1 898 aaPredicted RBP13.6□□□□□ -0.23
CHKB-211ENST00000489453 DDX46Q7L014 1031 aaKnown RBP13.6□□□□□ -0.23
CHKB-211ENST00000489453 VPS33BQ9H267 617 aa13.6□□□□□ -0.23
CHKB-211ENST00000489453 ADARB2Q9NS39 739 aaKnown RBP13.6□□□□□ -0.23
CHKB-211ENST00000489453 BABAM1Q9NWV8 329 aa13.6□□□□□ -0.23
CHKB-211ENST00000489453 PROSER3Q2NL68 480 aa13.59□□□□□ -0.23
CHKB-211ENST00000489453 SLC51AQ86UW1 340 aa13.59□□□□□ -0.23
CHKB-211ENST00000489453 MPNDQ8N594 471 aa13.59□□□□□ -0.23
CHKB-211ENST00000489453 BCL2L13Q9BXK5 485 aa13.59□□□□□ -0.23
CHKB-211ENST00000489453 ZNRF3Q9ULT6 936 aa13.59□□□□□ -0.23
CHKB-211ENST00000489453 THSD7BQ9C0I4 1608 aa13.59□□□□□ -0.23
CHKB-211ENST00000489453 DDX60Q8IY21 1712 aaKnown RBP13.59□□□□□ -0.23
CHKB-211ENST00000489453 BBOX1O75936 387 aa13.58□□□□□ -0.24
CHKB-211ENST00000489453 TMPOP42166 694 aaKnown RBP13.58□□□□□ -0.24
CHKB-211ENST00000489453 PDIA6Q15084 440 aa13.58□□□□□ -0.24
CHKB-211ENST00000489453 RALBP1Q15311 655 aa13.58□□□□□ -0.24
CHKB-211ENST00000489453 SLC10A5Q5PT55 438 aa13.58□□□□□ -0.24
CHKB-211ENST00000489453 COPS6Q7L5N1 327 aa13.58□□□□□ -0.24
CHKB-211ENST00000489453 XAGE3Q8WTP9 111 aa13.58□□□□□ -0.24
CHKB-211ENST00000489453 CAPNS2Q96L46 248 aa13.58□□□□□ -0.24
CHKB-211ENST00000489453 GPRC5DQ9NZD1 345 aa13.58□□□□□ -0.24
CHKB-211ENST00000489453 TRMT112Q9UI30 125 aaKnown RBP13.58□□□□□ -0.24
CHKB-211ENST00000489453 LAS1LQ9Y4W2 734 aaKnown RBP13.58□□□□□ -0.24
CHKB-211ENST00000489453 TRAF5O00463 557 aa13.57□□□□□ -0.24
CHKB-211ENST00000489453 HSPA8P11142 646 aaKnown RBP13.57□□□□□ -0.24
CHKB-211ENST00000489453 HCLS1P14317 486 aaPredicted RBP13.57□□□□□ -0.24
CHKB-211ENST00000489453 TNIP1Q15025 636 aa13.57□□□□□ -0.24
CHKB-211ENST00000489453 NEUROD2Q15784 382 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms