RNA–Protein interactions for RNA: ENST00000489452.1

LINC00173-204, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 543 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-204ENST00000489452 LAS1LQ9Y4W2 734 aaKnown RBP17.56■□□□□ 0.4
LINC00173-204ENST00000489452 PPP1R42Q7Z4L9 355 aa17.55■□□□□ 0.4
LINC00173-204ENST00000489452 LDHDQ86WU2 507 aa17.55■□□□□ 0.4
LINC00173-204ENST00000489452 JDP2Q8WYK2 163 aa17.55■□□□□ 0.4
LINC00173-204ENST00000489452 L3MBTL3Q96JM7 780 aaPredicted RBP17.55■□□□□ 0.4
LINC00173-204ENST00000489452 HACL1Q9UJ83 578 aa17.55■□□□□ 0.4
LINC00173-204ENST00000489452 GJA3Q9Y6H8 435 aa17.55■□□□□ 0.4
LINC00173-204ENST00000489452 KDM3BQ7LBC6 1761 aa17.55■□□□□ 0.4
LINC00173-204ENST00000489452 ERBB4Q15303 1308 aa17.54■□□□□ 0.4
LINC00173-204ENST00000489452 NTSR2O95665 410 aa17.54■□□□□ 0.4
LINC00173-204ENST00000489452 HOXA10P31260 410 aaPredicted RBP17.54■□□□□ 0.4
LINC00173-204ENST00000489452 ZNF428Q96B54 188 aa17.54■□□□□ 0.4
LINC00173-204ENST00000489452 NUP98P52948 1817 aa17.54■□□□□ 0.4
LINC00173-204ENST00000489452 FZD9O00144 591 aa17.53■□□□□ 0.4
LINC00173-204ENST00000489452 HSPA1AP0DMV8 641 aaKnown RBP17.53■□□□□ 0.4
LINC00173-204ENST00000489452 HSPA1BP0DMV9 641 aaKnown RBP17.53■□□□□ 0.4
LINC00173-204ENST00000489452 LMOD3Q0VAK6 560 aa17.53■□□□□ 0.4
LINC00173-204ENST00000489452 COPS6Q7L5N1 327 aa17.53■□□□□ 0.4
LINC00173-204ENST00000489452 NLRP3Q96P20 1036 aa17.53■□□□□ 0.4
LINC00173-204ENST00000489452 PSMD1Q99460 953 aa17.53■□□□□ 0.4
LINC00173-204ENST00000489452 UTP14AQ9BVJ6 771 aaKnown RBP17.53■□□□□ 0.4
LINC00173-204ENST00000489452 CREBZFQ9NS37 354 aa17.53■□□□□ 0.4
LINC00173-204ENST00000489452 LAMB4A4D0S4 1761 aa17.53■□□□□ 0.4
LINC00173-204ENST00000489452 ARFGEF2Q9Y6D5 1785 aa17.53■□□□□ 0.4
LINC00173-204ENST00000489452 RNF123Q5XPI4 1314 aa17.52■□□□□ 0.4
LINC00173-204ENST00000489452 PPEF1O14829 653 aaPredicted RBP17.52■□□□□ 0.4
LINC00173-204ENST00000489452 EPHX2P34913 555 aa17.52■□□□□ 0.4
LINC00173-204ENST00000489452 KRT24Q2M2I5 525 aa17.52■□□□□ 0.4
LINC00173-204ENST00000489452 PARP10Q53GL7 1025 aa17.52■□□□□ 0.4
LINC00173-204ENST00000489452 CC2D2BQ6DHV5 1058 aa17.52■□□□□ 0.4
LINC00173-204ENST00000489452 LRP10Q7Z4F1 713 aa17.52■□□□□ 0.4
LINC00173-204ENST00000489452 LARGE2Q8N3Y3 721 aa17.52■□□□□ 0.4
LINC00173-204ENST00000489452 XAGE3Q8WTP9 111 aa17.52■□□□□ 0.4
LINC00173-204ENST00000489452 CRAMP1Q96RY5 1269 aa17.52■□□□□ 0.4
LINC00173-204ENST00000489452 CAPN15O75808 1086 aa17.51■□□□□ 0.39
LINC00173-204ENST00000489452 EIF6P56537 245 aaKnown RBP17.51■□□□□ 0.39
LINC00173-204ENST00000489452 BABAM1Q9NWV8 329 aa17.51■□□□□ 0.39
LINC00173-204ENST00000489452 HCLS1P14317 486 aaPredicted RBP17.5■□□□□ 0.39
LINC00173-204ENST00000489452 WDR43Q15061 677 aaKnown RBP eCLIP17.5■□□□□ 0.39
LINC00173-204ENST00000489452 MAP1SQ66K74 1059 aaPredicted RBP17.5■□□□□ 0.39
LINC00173-204ENST00000489452 GPC2Q8N158 579 aa17.5■□□□□ 0.39
LINC00173-204ENST00000489452 TMX4Q9H1E5 349 aaPredicted RBP17.5■□□□□ 0.39
LINC00173-204ENST00000489452 MYBBP1AQ9BQG0 1328 aaKnown RBP17.49■□□□□ 0.39
LINC00173-204ENST00000489452 CHL1O00533 1208 aa17.49■□□□□ 0.39
LINC00173-204ENST00000489452 ITGBL1O95965 494 aaPredicted RBP17.49■□□□□ 0.39
LINC00173-204ENST00000489452 SLC10A5Q5PT55 438 aa17.49■□□□□ 0.39
LINC00173-204ENST00000489452 TNS4Q8IZW8 715 aa17.49■□□□□ 0.39
LINC00173-204ENST00000489452 RUNDC1Q96C34 613 aa17.49■□□□□ 0.39
LINC00173-204ENST00000489452 ADAMTS8Q9UP79 889 aa17.49■□□□□ 0.39
LINC00173-204ENST00000489452 TRIM35Q9UPQ4 493 aa17.49■□□□□ 0.39
LINC00173-204ENST00000489452 IBTKQ9P2D0 1353 aaPredicted RBP17.49■□□□□ 0.39
LINC00173-204ENST00000489452 PASKQ96RG2 1323 aa17.48■□□□□ 0.39
LINC00173-204ENST00000489452 PNMA8AQ86V59 439 aaPredicted RBP17.48■□□□□ 0.39
LINC00173-204ENST00000489452 NLRP10Q86W26 655 aa17.48■□□□□ 0.39
LINC00173-204ENST00000489452 CNTROBQ8N137 903 aa17.48■□□□□ 0.39
LINC00173-204ENST00000489452 TRMT112Q9UI30 125 aaKnown RBP17.48■□□□□ 0.39
LINC00173-204ENST00000489452 TMEM88BA6NKF7 163 aa17.47■□□□□ 0.39
LINC00173-204ENST00000489452 PPIP5K2O43314 1243 aa17.47■□□□□ 0.39
LINC00173-204ENST00000489452 TCIRG1Q13488 830 aa17.47■□□□□ 0.39
LINC00173-204ENST00000489452 GRIPAP1Q4V328 841 aa17.47■□□□□ 0.39
LINC00173-204ENST00000489452 HSP90AB3PQ58FF7 597 aa17.47■□□□□ 0.39
LINC00173-204ENST00000489452 DDX21Q9NR30 783 aaKnown RBP eCLIP17.47■□□□□ 0.39
LINC00173-204ENST00000489452 ATP6V0A2Q9Y487 856 aa17.47■□□□□ 0.39
LINC00173-204ENST00000489452 LMOD1P29536 600 aaPredicted RBP17.46■□□□□ 0.39
LINC00173-204ENST00000489452 EPS15P42566 896 aa17.46■□□□□ 0.39
LINC00173-204ENST00000489452 AOC3Q16853 763 aa17.46■□□□□ 0.39
LINC00173-204ENST00000489452 NIM1KQ8IY84 436 aa17.46■□□□□ 0.39
LINC00173-204ENST00000489452 CHPF2Q9P2E5 772 aa17.46■□□□□ 0.39
LINC00173-204ENST00000489452 SCN4AP35499 1836 aa17.46■□□□□ 0.39
LINC00173-204ENST00000489452 SNED1Q8TER0 1413 aa17.46■□□□□ 0.39
LINC00173-204ENST00000489452 ABCC4O15439 1325 aa17.46■□□□□ 0.38
LINC00173-204ENST00000489452 HDGFL1Q5TGJ6 251 aa17.45■□□□□ 0.38
LINC00173-204ENST00000489452 RIC1Q4ADV7 1423 aa17.45■□□□□ 0.38
LINC00173-204ENST00000489452 COL4A5P29400 1685 aa17.45■□□□□ 0.38
LINC00173-204ENST00000489452 BBOX1O75936 387 aa17.44■□□□□ 0.38
LINC00173-204ENST00000489452 VEGFBP49765 207 aa17.44■□□□□ 0.38
LINC00173-204ENST00000489452 DDX46Q7L014 1031 aaKnown RBP17.44■□□□□ 0.38
LINC00173-204ENST00000489452 CNTNAP1P78357 1384 aa17.43■□□□□ 0.38
LINC00173-204ENST00000489452 ATP5J2-PTCD1G3V325 749 aa17.43■□□□□ 0.38
LINC00173-204ENST00000489452 SCNN1DP51172 638 aa17.43■□□□□ 0.38
LINC00173-204ENST00000489452 FMR1Q06787 632 aaKnown RBP eCLIP17.43■□□□□ 0.38
LINC00173-204ENST00000489452 DPP8Q6V1X1 898 aaPredicted RBP17.43■□□□□ 0.38
LINC00173-204ENST00000489452 SH3TC1Q8TE82 1336 aa17.43■□□□□ 0.38
LINC00173-204ENST00000489452 RTL5Q5HYW3 569 aaPredicted RBP17.42■□□□□ 0.38
LINC00173-204ENST00000489452 ANKRD13DQ6ZTN6 518 aa17.42■□□□□ 0.38
LINC00173-204ENST00000489452 SP8Q8IXZ3 490 aa17.42■□□□□ 0.38
LINC00173-204ENST00000489452 MPNDQ8N594 471 aa17.42■□□□□ 0.38
LINC00173-204ENST00000489452 CXCL9Q07325 125 aa17.41■□□□□ 0.38
LINC00173-204ENST00000489452 DEFB115Q30KQ5 88 aa17.41■□□□□ 0.38
LINC00173-204ENST00000489452 DUSP27Q5VZP5 1158 aa17.41■□□□□ 0.38
LINC00173-204ENST00000489452 SUPT20HQ8NEM7 779 aa17.41■□□□□ 0.38
LINC00173-204ENST00000489452 FAM89AQ96GI7 184 aa17.41■□□□□ 0.38
LINC00173-204ENST00000489452 ZNRF3Q9ULT6 936 aa17.41■□□□□ 0.38
LINC00173-204ENST00000489452 ABT1Q9ULW3 272 aaKnown RBP17.41■□□□□ 0.38
LINC00173-204ENST00000489452 FOXN1O15353 648 aa17.4■□□□□ 0.38
LINC00173-204ENST00000489452 RAD17O75943 681 aa17.4■□□□□ 0.38
LINC00173-204ENST00000489452 PLBD2Q8NHP8 589 aa17.4■□□□□ 0.38
LINC00173-204ENST00000489452 CFAP44Q96MT7 982 aa17.4■□□□□ 0.38
LINC00173-204ENST00000489452 DBF4Q9UBU7 674 aaPredicted RBP17.4■□□□□ 0.38
LINC00173-204ENST00000489452 TRAF5O00463 557 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms