RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 SYNE4Q8N205 404 aa16.28■□□□□ 0.2
TTC3-221ENST00000488522 PLEKHF1Q96S99 279 aa16.28■□□□□ 0.2
TTC3-221ENST00000488522 LTBP1Q14766 1721 aa16.28■□□□□ 0.2
TTC3-221ENST00000488522 UBN2Q6ZU65 1347 aa16.27■□□□□ 0.2
TTC3-221ENST00000488522 FOXN1O15353 648 aa16.27■□□□□ 0.2
TTC3-221ENST00000488522 EIF4A1P60842 406 aaKnown RBP16.27■□□□□ 0.2
TTC3-221ENST00000488522 RNF123Q5XPI4 1314 aa16.26■□□□□ 0.19
TTC3-221ENST00000488522 RASSF10A6NK89 507 aa16.26■□□□□ 0.19
TTC3-221ENST00000488522 CAPN15O75808 1086 aa16.26■□□□□ 0.19
TTC3-221ENST00000488522 GTF2E1P29083 439 aaPredicted RBP16.25■□□□□ 0.19
TTC3-221ENST00000488522 VEGFBP49765 207 aa16.25■□□□□ 0.19
TTC3-221ENST00000488522 EAPPQ56P03 285 aaPredicted RBP16.25■□□□□ 0.19
TTC3-221ENST00000488522 CRAMP1Q96RY5 1269 aa16.25■□□□□ 0.19
TTC3-221ENST00000488522 WBP1LQ9NX94 342 aa16.25■□□□□ 0.19
TTC3-221ENST00000488522 MIS18AQ9NYP9 233 aa16.25■□□□□ 0.19
TTC3-221ENST00000488522 FAM177BA6PVY3 158 aa16.24■□□□□ 0.19
TTC3-221ENST00000488522 NTSR2O95665 410 aa16.24■□□□□ 0.19
TTC3-221ENST00000488522 NFE2L2Q16236 605 aa16.24■□□□□ 0.19
TTC3-221ENST00000488522 GIGYF2Q6Y7W6 1299 aaKnown RBP16.24■□□□□ 0.19
TTC3-221ENST00000488522 KIF6Q6ZMV9 814 aa16.24■□□□□ 0.19
TTC3-221ENST00000488522 TTLL7Q6ZT98 887 aa16.24■□□□□ 0.19
TTC3-221ENST00000488522 LRP10Q7Z4F1 713 aa16.24■□□□□ 0.19
TTC3-221ENST00000488522 NUTM1Q86Y26 1132 aa16.24■□□□□ 0.19
TTC3-221ENST00000488522 ZNF34Q8IZ26 560 aa16.24■□□□□ 0.19
TTC3-221ENST00000488522 JDP2Q8WYK2 163 aa16.24■□□□□ 0.19
TTC3-221ENST00000488522 CTCFP49711 727 aaPredicted RBP16.23■□□□□ 0.19
TTC3-221ENST00000488522 CNTROBQ8N137 903 aa16.23■□□□□ 0.19
TTC3-221ENST00000488522 NEFMP07197 916 aa16.22■□□□□ 0.19
TTC3-221ENST00000488522 SCNN1DP51172 638 aa16.22■□□□□ 0.19
TTC3-221ENST00000488522 SUSD4Q5VX71 490 aa16.22■□□□□ 0.19
TTC3-221ENST00000488522 RPGRQ92834 1020 aaKnown RBP16.22■□□□□ 0.19
TTC3-221ENST00000488522 VPS33BQ9H267 617 aa16.22■□□□□ 0.19
TTC3-221ENST00000488522 ANKRD36CQ5JPF3 1778 aa16.22■□□□□ 0.19
TTC3-221ENST00000488522 TRPM7Q96QT4 1865 aa16.21■□□□□ 0.19
TTC3-221ENST00000488522 EIF6P56537 245 aaKnown RBP16.21■□□□□ 0.19
TTC3-221ENST00000488522 PARP10Q53GL7 1025 aa16.21■□□□□ 0.19
TTC3-221ENST00000488522 MAP1SQ66K74 1059 aaPredicted RBP16.21■□□□□ 0.19
TTC3-221ENST00000488522 CLEC11AQ9Y240 323 aa16.21■□□□□ 0.19
TTC3-221ENST00000488522 DEFB115Q30KQ5 88 aa16.2■□□□□ 0.18
TTC3-221ENST00000488522 SLC10A5Q5PT55 438 aa16.2■□□□□ 0.18
TTC3-221ENST00000488522 AIDAQ96BJ3 306 aa16.2■□□□□ 0.18
TTC3-221ENST00000488522 RBM17Q96I25 401 aaKnown RBP16.2■□□□□ 0.18
TTC3-221ENST00000488522 ZBTB3Q9H5J0 574 aa16.2■□□□□ 0.18
TTC3-221ENST00000488522 DDX21Q9NR30 783 aaKnown RBP eCLIP16.2■□□□□ 0.18
TTC3-221ENST00000488522 RRP7AQ9Y3A4 280 aaKnown RBP16.2■□□□□ 0.18
TTC3-221ENST00000488522 LAMB2P55268 1798 aa16.19■□□□□ 0.18
TTC3-221ENST00000488522 PPEF1O14829 653 aaPredicted RBP16.19■□□□□ 0.18
TTC3-221ENST00000488522 MYL6BP14649 208 aa16.19■□□□□ 0.18
TTC3-221ENST00000488522 GPTP24298 496 aa16.19■□□□□ 0.18
TTC3-221ENST00000488522 PDIA6Q15084 440 aa16.19■□□□□ 0.18
TTC3-221ENST00000488522 USP50Q70EL3 339 aaPredicted RBP16.19■□□□□ 0.18
TTC3-221ENST00000488522 PPP1R42Q7Z4L9 355 aa16.19■□□□□ 0.18
TTC3-221ENST00000488522 LARGE2Q8N3Y3 721 aa16.19■□□□□ 0.18
TTC3-221ENST00000488522 NGEFQ8N5V2 710 aa16.19■□□□□ 0.18
TTC3-221ENST00000488522 PNNQ9H307 717 aaKnown RBP16.19■□□□□ 0.18
TTC3-221ENST00000488522 BABAM1Q9NWV8 329 aa16.19■□□□□ 0.18
TTC3-221ENST00000488522 LMOD1P29536 600 aaPredicted RBP16.18■□□□□ 0.18
TTC3-221ENST00000488522 C3orf67Q6ZVT6 689 aa16.18■□□□□ 0.18
TTC3-221ENST00000488522 THUMPD2Q9BTF0 503 aaKnown RBP16.18■□□□□ 0.18
TTC3-221ENST00000488522 RTFDC1Q9BY42 306 aaPredicted RBP16.18■□□□□ 0.18
TTC3-221ENST00000488522 WDR33Q9C0J8 1336 aaKnown RBP16.18■□□□□ 0.18
TTC3-221ENST00000488522 HSPA8P11142 646 aaKnown RBP16.17■□□□□ 0.18
TTC3-221ENST00000488522 EPS15P42566 896 aa16.17■□□□□ 0.18
TTC3-221ENST00000488522 MAP2K1Q02750 393 aaPredicted RBP16.17■□□□□ 0.18
TTC3-221ENST00000488522 SLC51AQ86UW1 340 aa16.17■□□□□ 0.18
TTC3-221ENST00000488522 ATP6V0A2Q9Y487 856 aa16.17■□□□□ 0.18
TTC3-221ENST00000488522 CDHR2Q9BYE9 1310 aa16.17■□□□□ 0.18
TTC3-221ENST00000488522 LRRC37AA6NMS7 1700 aa16.16■□□□□ 0.18
TTC3-221ENST00000488522 NIM1KQ8IY84 436 aa16.16■□□□□ 0.18
TTC3-221ENST00000488522 NLRP3Q96P20 1036 aa16.16■□□□□ 0.18
TTC3-221ENST00000488522 GJA3Q9Y6H8 435 aa16.16■□□□□ 0.18
TTC3-221ENST00000488522 ABCC4O15439 1325 aa16.16■□□□□ 0.18
TTC3-221ENST00000488522 MAPK8IP3Q9UPT6 1336 aa16.16■□□□□ 0.18
TTC3-221ENST00000488522 LBX1P52954 281 aa16.15■□□□□ 0.18
TTC3-221ENST00000488522 GPRC5DQ9NZD1 345 aa16.15■□□□□ 0.18
TTC3-221ENST00000488522 DUOX1Q9NRD9 1551 aa16.14■□□□□ 0.17
TTC3-221ENST00000488522 PPIP5K2O43314 1243 aa16.14■□□□□ 0.17
TTC3-221ENST00000488522 SUPT20HQ8NEM7 779 aa16.14■□□□□ 0.17
TTC3-221ENST00000488522 UTP14AQ9BVJ6 771 aaKnown RBP16.14■□□□□ 0.17
TTC3-221ENST00000488522 ADARB2Q9NS39 739 aaKnown RBP16.14■□□□□ 0.17
TTC3-221ENST00000488522 TSPYL4Q9UJ04 414 aa16.14■□□□□ 0.17
TTC3-221ENST00000488522 ABT1Q9ULW3 272 aaKnown RBP16.14■□□□□ 0.17
TTC3-221ENST00000488522 BBOX1O75936 387 aa16.13■□□□□ 0.17
TTC3-221ENST00000488522 ECE1P42892 770 aa16.13■□□□□ 0.17
TTC3-221ENST00000488522 AOC3Q16853 763 aa16.13■□□□□ 0.17
TTC3-221ENST00000488522 HSP90AB3PQ58FF7 597 aa16.13■□□□□ 0.17
TTC3-221ENST00000488522 CST9Q5W186 159 aa16.13■□□□□ 0.17
TTC3-221ENST00000488522 PGAP2Q9UHJ9 254 aa16.13■□□□□ 0.17
TTC3-221ENST00000488522 ZNRF3Q9ULT6 936 aa16.13■□□□□ 0.17
TTC3-221ENST00000488522 TLL2Q9Y6L7 1015 aa16.13■□□□□ 0.17
TTC3-221ENST00000488522 CXCL9Q07325 125 aa16.12■□□□□ 0.17
TTC3-221ENST00000488522 KIAA2012Q0VF49 1180 aa16.12■□□□□ 0.17
TTC3-221ENST00000488522 PROSER3Q2NL68 480 aa16.12■□□□□ 0.17
TTC3-221ENST00000488522 NLRP10Q86W26 655 aa16.12■□□□□ 0.17
TTC3-221ENST00000488522 SP8Q8IXZ3 490 aa16.12■□□□□ 0.17
TTC3-221ENST00000488522 HHIPL1Q96JK4 782 aa16.12■□□□□ 0.17
TTC3-221ENST00000488522 CAPNS2Q96L46 248 aa16.12■□□□□ 0.17
TTC3-221ENST00000488522 FMR1Q06787 632 aaKnown RBP eCLIP16.11■□□□□ 0.173e-7■■□□□ 12.6
TTC3-221ENST00000488522 TMX4Q9H1E5 349 aaPredicted RBP16.11■□□□□ 0.17
TTC3-221ENST00000488522 DDX60Q8IY21 1712 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms