RNA–Protein interactions for RNA: ENST00000488344.6

VAMP7-206, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 2

Gene VAMP7, Length 696 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-206ENST00000488344 TTLL7Q6ZT98 887 aa14.72□□□□□ -0.05
VAMP7-206ENST00000488344 PSMD1Q99460 953 aa14.72□□□□□ -0.05
VAMP7-206ENST00000488344 TMX4Q9H1E5 349 aaPredicted RBP14.72□□□□□ -0.05
VAMP7-206ENST00000488344 ZBTB3Q9H5J0 574 aa14.72□□□□□ -0.05
VAMP7-206ENST00000488344 ARFGEF2Q9Y6D5 1785 aa14.72□□□□□ -0.05
VAMP7-206ENST00000488344 RNF123Q5XPI4 1314 aa14.71□□□□□ -0.05
VAMP7-206ENST00000488344 TMPOP42166 694 aaKnown RBP14.71□□□□□ -0.05
VAMP7-206ENST00000488344 HTRA3P83110 453 aa14.71□□□□□ -0.05
VAMP7-206ENST00000488344 HSP90AB3PQ58FF7 597 aa14.71□□□□□ -0.05
VAMP7-206ENST00000488344 NUTM1Q86Y26 1132 aa14.71□□□□□ -0.05
VAMP7-206ENST00000488344 JDP2Q8WYK2 163 aa14.71□□□□□ -0.05
VAMP7-206ENST00000488344 RBM17Q96I25 401 aaKnown RBP14.71□□□□□ -0.05
VAMP7-206ENST00000488344 ZNF277Q9NRM2 450 aaPredicted RBP14.71□□□□□ -0.05
VAMP7-206ENST00000488344 ABCC12Q96J65 1359 aa14.71□□□□□ -0.06
VAMP7-206ENST00000488344 EIF2S2P20042 333 aaKnown RBP14.7□□□□□ -0.06
VAMP7-206ENST00000488344 GPTP24298 496 aa14.7□□□□□ -0.06
VAMP7-206ENST00000488344 HOXA10P31260 410 aaPredicted RBP14.7□□□□□ -0.06
VAMP7-206ENST00000488344 IARSP41252 1262 aaKnown RBP14.7□□□□□ -0.06
VAMP7-206ENST00000488344 LDHDQ86WU2 507 aa14.7□□□□□ -0.06
VAMP7-206ENST00000488344 ZNF34Q8IZ26 560 aa14.7□□□□□ -0.06
VAMP7-206ENST00000488344 CRAMP1Q96RY5 1269 aa14.7□□□□□ -0.06
VAMP7-206ENST00000488344 SLX4Q8IY92 1834 aa14.7□□□□□ -0.06
VAMP7-206ENST00000488344 UBN2Q6ZU65 1347 aa14.69□□□□□ -0.06
VAMP7-206ENST00000488344 NTSR2O95665 410 aa14.69□□□□□ -0.06
VAMP7-206ENST00000488344 SUSD4Q5VX71 490 aa14.69□□□□□ -0.06
VAMP7-206ENST00000488344 SYNE4Q8N205 404 aa14.69□□□□□ -0.06
VAMP7-206ENST00000488344 DDX10Q13206 875 aaKnown RBP14.68□□□□□ -0.06
VAMP7-206ENST00000488344 RUNDC1Q96C34 613 aa14.68□□□□□ -0.06
VAMP7-206ENST00000488344 NLRP3Q96P20 1036 aa14.68□□□□□ -0.06
VAMP7-206ENST00000488344 UTP14AQ9BVJ6 771 aaKnown RBP14.68□□□□□ -0.06
VAMP7-206ENST00000488344 TAF1DQ9H5J8 278 aaPredicted RBP14.68□□□□□ -0.06
VAMP7-206ENST00000488344 CREBZFQ9NS37 354 aa14.68□□□□□ -0.06
VAMP7-206ENST00000488344 HACL1Q9UJ83 578 aa14.68□□□□□ -0.06
VAMP7-206ENST00000488344 DLG5Q8TDM6 1919 aa14.67□□□□□ -0.06
VAMP7-206ENST00000488344 FZD9O00144 591 aa14.67□□□□□ -0.06
VAMP7-206ENST00000488344 EIF6P56537 245 aaKnown RBP14.67□□□□□ -0.06
VAMP7-206ENST00000488344 PNMA8AQ86V59 439 aaPredicted RBP14.67□□□□□ -0.06
VAMP7-206ENST00000488344 GPC2Q8N158 579 aa14.67□□□□□ -0.06
VAMP7-206ENST00000488344 DICER1Q9UPY3 1922 aaKnown RBP14.66□□□□□ -0.06
VAMP7-206ENST00000488344 PPEF1O14829 653 aaPredicted RBP14.66□□□□□ -0.06
VAMP7-206ENST00000488344 HOXB7P09629 217 aa14.66□□□□□ -0.06
VAMP7-206ENST00000488344 PDIA6Q15084 440 aa14.66□□□□□ -0.06
VAMP7-206ENST00000488344 ZNF541Q9H0D2 1346 aa14.66□□□□□ -0.06
VAMP7-206ENST00000488344 CHL1O00533 1208 aa14.65□□□□□ -0.06
VAMP7-206ENST00000488344 NEUROD2Q15784 382 aa14.65□□□□□ -0.06
VAMP7-206ENST00000488344 OLFM4Q6UX06 510 aa14.65□□□□□ -0.06
VAMP7-206ENST00000488344 LRP10Q7Z4F1 713 aa14.65□□□□□ -0.06
VAMP7-206ENST00000488344 VPS33BQ9H267 617 aa14.65□□□□□ -0.06
VAMP7-206ENST00000488344 DDX21Q9NR30 783 aaKnown RBP eCLIP14.65□□□□□ -0.06
VAMP7-206ENST00000488344 LMOD1P29536 600 aaPredicted RBP14.64□□□□□ -0.07
VAMP7-206ENST00000488344 EPHX2P34913 555 aa14.64□□□□□ -0.07
VAMP7-206ENST00000488344 EAPPQ56P03 285 aaPredicted RBP14.64□□□□□ -0.07
VAMP7-206ENST00000488344 SLC10A5Q5PT55 438 aa14.64□□□□□ -0.07
VAMP7-206ENST00000488344 COPS6Q7L5N1 327 aa14.64□□□□□ -0.07
VAMP7-206ENST00000488344 CCDC146Q8IYE0 955 aa14.64□□□□□ -0.07
VAMP7-206ENST00000488344 LARGE2Q8N3Y3 721 aa14.64□□□□□ -0.07
VAMP7-206ENST00000488344 SUPT20HQ8NEM7 779 aa14.64□□□□□ -0.07
VAMP7-206ENST00000488344 SNED1Q8TER0 1413 aa14.64□□□□□ -0.07
VAMP7-206ENST00000488344 CCDC88AQ3V6T2 1871 aa14.63□□□□□ -0.07
VAMP7-206ENST00000488344 CALD1Q05682 793 aaKnown RBP14.63□□□□□ -0.07
VAMP7-206ENST00000488344 AIMP1Q12904 312 aaKnown RBP14.63□□□□□ -0.07
VAMP7-206ENST00000488344 PROSER3Q2NL68 480 aa14.63□□□□□ -0.07
VAMP7-206ENST00000488344 HDGFL1Q5TGJ6 251 aa14.63□□□□□ -0.07
VAMP7-206ENST00000488344 NIM1KQ8IY84 436 aa14.63□□□□□ -0.07
VAMP7-206ENST00000488344 XAGE3Q8WTP9 111 aa14.63□□□□□ -0.07
VAMP7-206ENST00000488344 CLEC11AQ9Y240 323 aa14.63□□□□□ -0.07
VAMP7-206ENST00000488344 LAS1LQ9Y4W2 734 aaKnown RBP14.63□□□□□ -0.07
VAMP7-206ENST00000488344 CACNA1SQ13698 1873 aa14.63□□□□□ -0.07
VAMP7-206ENST00000488344 BBOX1O75936 387 aa14.62□□□□□ -0.07
VAMP7-206ENST00000488344 POTEIP0CG38 1075 aa14.62□□□□□ -0.07
VAMP7-206ENST00000488344 POTEJP0CG39 1038 aa14.62□□□□□ -0.07
VAMP7-206ENST00000488344 TCIRG1Q13488 830 aa14.62□□□□□ -0.07
VAMP7-206ENST00000488344 TMC4Q7Z404 712 aa14.62□□□□□ -0.07
VAMP7-206ENST00000488344 NLRP10Q86W26 655 aa14.62□□□□□ -0.07
VAMP7-206ENST00000488344 NECTIN2Q92692 538 aa14.62□□□□□ -0.07
VAMP7-206ENST00000488344 DBF4Q9UBU7 674 aaPredicted RBP14.62□□□□□ -0.07
VAMP7-206ENST00000488344 TRMT112Q9UI30 125 aaKnown RBP14.62□□□□□ -0.07
VAMP7-206ENST00000488344 ATP6V0A2Q9Y487 856 aa14.62□□□□□ -0.07
VAMP7-206ENST00000488344 SH3TC1Q8TE82 1336 aa14.62□□□□□ -0.07
VAMP7-206ENST00000488344 PASKQ96RG2 1323 aa14.62□□□□□ -0.07
VAMP7-206ENST00000488344 SCN4AP35499 1836 aa14.62□□□□□ -0.07
VAMP7-206ENST00000488344 PPIP5K2O43314 1243 aa14.61□□□□□ -0.07
VAMP7-206ENST00000488344 ANXA1P04083 346 aa14.61□□□□□ -0.07
VAMP7-206ENST00000488344 DDX46Q7L014 1031 aaKnown RBP14.61□□□□□ -0.07
VAMP7-206ENST00000488344 PIP4P2Q8N4L2 257 aa14.61□□□□□ -0.07
VAMP7-206ENST00000488344 PLBD2Q8NHP8 589 aa14.61□□□□□ -0.07
VAMP7-206ENST00000488344 CFAP44Q96MT7 982 aa14.61□□□□□ -0.07
VAMP7-206ENST00000488344 CHMP4AQ9BY43 222 aa14.61□□□□□ -0.07
VAMP7-206ENST00000488344 ADAMTS8Q9UP79 889 aa14.61□□□□□ -0.07
VAMP7-206ENST00000488344 TRIM35Q9UPQ4 493 aa14.61□□□□□ -0.07
VAMP7-206ENST00000488344 GJA3Q9Y6H8 435 aa14.61□□□□□ -0.07
VAMP7-206ENST00000488344 NUP98P52948 1817 aa14.61□□□□□ -0.07
VAMP7-206ENST00000488344 TMEM88BA6NKF7 163 aa14.6□□□□□ -0.07
VAMP7-206ENST00000488344 HSPA1AP0DMV8 641 aaKnown RBP14.6□□□□□ -0.07
VAMP7-206ENST00000488344 HSPA1BP0DMV9 641 aaKnown RBP14.6□□□□□ -0.07
VAMP7-206ENST00000488344 HYPKQ9NX55 129 aa14.6□□□□□ -0.07
VAMP7-206ENST00000488344 CHPF2Q9P2E5 772 aa14.6□□□□□ -0.07
VAMP7-206ENST00000488344 ABCC4O15439 1325 aa14.6□□□□□ -0.07
VAMP7-206ENST00000488344 CNTNAP1P78357 1384 aa14.6□□□□□ -0.07
VAMP7-206ENST00000488344 TCERG1O14776 1098 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms