RNA–Protein interactions for RNA: ENST00000486417.5

TMC1-204, Transcript of transmembrane channel like 1, humanhuman

TSL 2

Gene TMC1, Length 1,528 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-204ENST00000486417 INTS3Q68E01 1043 aaKnown RBP9.11□□□□□ -0.95
TMC1-204ENST00000486417 NRAPQ86VF7 1730 aa9.11□□□□□ -0.95
TMC1-204ENST00000486417 TOGARAM1Q9Y4F4 1720 aa9.11□□□□□ -0.95
TMC1-204ENST00000486417 APBB1O00213 710 aa9.1□□□□□ -0.95
TMC1-204ENST00000486417 RIMBP2O15034 1052 aa9.1□□□□□ -0.95
TMC1-204ENST00000486417 HOXB7P09629 217 aa9.1□□□□□ -0.95
TMC1-204ENST00000486417 PHKG2P15735 406 aa9.1□□□□□ -0.95
TMC1-204ENST00000486417 RGS3P49796 1198 aa9.1□□□□□ -0.95
TMC1-204ENST00000486417 CCDC30Q5VVM6 783 aa9.1□□□□□ -0.95
TMC1-204ENST00000486417 STK31Q9BXU1 1019 aa9.1□□□□□ -0.95
TMC1-204ENST00000486417 SCUBE2Q9NQ36 999 aa9.1□□□□□ -0.95
TMC1-204ENST00000486417 POLR3EQ9NVU0 708 aa9.1□□□□□ -0.95
TMC1-204ENST00000486417 SPG7Q9UQ90 795 aa9.1□□□□□ -0.95
TMC1-204ENST00000486417 UBR2Q8IWV8 1755 aa9.1□□□□□ -0.95
TMC1-204ENST00000486417 BTBD11A6QL63 1104 aa9.1□□□□□ -0.95
TMC1-204ENST00000486417 PDIA4P13667 645 aaKnown RBP9.1□□□□□ -0.95
TMC1-204ENST00000486417 G2E3Q7L622 706 aa9.1□□□□□ -0.95
TMC1-204ENST00000486417 BACH2Q9BYV9 841 aa9.1□□□□□ -0.95
TMC1-204ENST00000486417 ATP10DQ9P241 1426 aa9.1□□□□□ -0.95
TMC1-204ENST00000486417 RBM27Q9P2N5 1060 aaKnown RBP9.1□□□□□ -0.95
TMC1-204ENST00000486417 PDZRN3Q9UPQ7 1066 aa9.1□□□□□ -0.95
TMC1-204ENST00000486417 CCDC9Q9Y3X0 531 aaKnown RBP9.1□□□□□ -0.95
TMC1-204ENST00000486417 KCNQ3O43525 872 aa9.09□□□□□ -0.95
TMC1-204ENST00000486417 FLIIQ13045 1269 aa9.09□□□□□ -0.95
TMC1-204ENST00000486417 HDGFL1Q5TGJ6 251 aa9.09□□□□□ -0.95
TMC1-204ENST00000486417 IFNL2Q8IZJ0 200 aa9.09□□□□□ -0.95
TMC1-204ENST00000486417 NECTIN2Q92692 538 aa9.09□□□□□ -0.95
TMC1-204ENST00000486417 PCMTD1Q96MG8 357 aaPredicted RBP9.09□□□□□ -0.95
TMC1-204ENST00000486417 HEG1Q9ULI3 1381 aa9.09□□□□□ -0.95
TMC1-204ENST00000486417 TOM1L2Q6ZVM7 507 aa9.08□□□□□ -0.96
TMC1-204ENST00000486417 SMC5Q8IY18 1101 aa9.08□□□□□ -0.96
TMC1-204ENST00000486417 BCL2L12Q9HB09 334 aa9.08□□□□□ -0.96
TMC1-204ENST00000486417 RCCD1A6NED2 376 aa9.07□□□□□ -0.96
TMC1-204ENST00000486417 CYP27B1O15528 508 aa9.07□□□□□ -0.96
TMC1-204ENST00000486417 PPP4R3BQ5MIZ7 849 aa9.07□□□□□ -0.96
TMC1-204ENST00000486417 MYSM1Q5VVJ2 828 aa9.07□□□□□ -0.96
TMC1-204ENST00000486417 CARD10Q9BWT7 1032 aa9.07□□□□□ -0.96
TMC1-204ENST00000486417 SLC52A2Q9HAB3 445 aa9.07□□□□□ -0.96
TMC1-204ENST00000486417 PCDH11XQ9BZA7 1347 aa9.07□□□□□ -0.96
TMC1-204ENST00000486417 PCDH11YQ9BZA8 1340 aa9.07□□□□□ -0.96
TMC1-204ENST00000486417 NWD2Q9ULI1 1742 aa9.07□□□□□ -0.96
TMC1-204ENST00000486417 F6X3S4 739 aa9.06□□□□□ -0.96
TMC1-204ENST00000486417 HSP90AB1P08238 724 aaKnown RBP9.06□□□□□ -0.96
TMC1-204ENST00000486417 CCT4P50991 539 aaKnown RBP9.06□□□□□ -0.96
TMC1-204ENST00000486417 FKBP5Q13451 457 aaPredicted RBP9.06□□□□□ -0.96
TMC1-204ENST00000486417 SKIV2LQ15477 1246 aaKnown RBP9.06□□□□□ -0.96
TMC1-204ENST00000486417 C8orf34Q49A92 452 aa9.06□□□□□ -0.96
TMC1-204ENST00000486417 NUDT18Q6ZVK8 323 aa9.06□□□□□ -0.96
TMC1-204ENST00000486417 DCAF5Q96JK2 942 aa9.06□□□□□ -0.96
TMC1-204ENST00000486417 CHMP4AQ9BY43 222 aa9.06□□□□□ -0.96
TMC1-204ENST00000486417 SMAPO00193 183 aa9.05□□□□□ -0.96
TMC1-204ENST00000486417 PROX2Q3B8N5 592 aa9.05□□□□□ -0.96
TMC1-204ENST00000486417 LARP1Q6PKG0 1096 aaKnown RBP9.05□□□□□ -0.96
TMC1-204ENST00000486417 RBM46Q8TBY0 533 aaKnown RBP9.05□□□□□ -0.96
TMC1-204ENST00000486417 MEIS3Q99687 375 aa9.05□□□□□ -0.96
TMC1-204ENST00000486417 STRN4Q9NRL3 753 aa9.05□□□□□ -0.96
TMC1-204ENST00000486417 CHPF2Q9P2E5 772 aa9.05□□□□□ -0.96
TMC1-204ENST00000486417 LRP6O75581 1613 aa9.05□□□□□ -0.96
TMC1-204ENST00000486417 DISP2A7MBM2 1401 aa9.05□□□□□ -0.96
TMC1-204ENST00000486417 ITGB4P16144 1822 aa9.05□□□□□ -0.96
TMC1-204ENST00000486417 GIGYF1O75420 1035 aaPredicted RBP9.05□□□□□ -0.96
TMC1-204ENST00000486417 HOXB1P14653 301 aaPredicted RBP9.05□□□□□ -0.96
TMC1-204ENST00000486417 IL2RBP14784 551 aa9.05□□□□□ -0.96
TMC1-204ENST00000486417 EIF2S2P20042 333 aaKnown RBP9.05□□□□□ -0.96
TMC1-204ENST00000486417 SLC4A10Q6U841 1118 aa9.05□□□□□ -0.96
TMC1-204ENST00000486417 SIRT2Q8IXJ6 389 aa9.05□□□□□ -0.96
TMC1-204ENST00000486417 ZCRB1Q8TBF4 217 aaKnown RBP9.05□□□□□ -0.96
TMC1-204ENST00000486417 GCC1Q96CN9 775 aa9.05□□□□□ -0.96
TMC1-204ENST00000486417 TBC1D2Q9BYX2 928 aa9.05□□□□□ -0.96
TMC1-204ENST00000486417 PHAXQ9H814 394 aaKnown RBP9.05□□□□□ -0.96
TMC1-204ENST00000486417 KCPQ6ZWJ8 1503 aa9.05□□□□□ -0.96
TMC1-204ENST00000486417 ARFGEF2Q9Y6D5 1785 aa9.04□□□□□ -0.96
TMC1-204ENST00000486417 PPP1R3GB7ZBB8 358 aa9.04□□□□□ -0.96
TMC1-204ENST00000486417 PTPREP23469 700 aa9.04□□□□□ -0.96
TMC1-204ENST00000486417 NUCB1Q02818 461 aa9.04□□□□□ -0.96
TMC1-204ENST00000486417 CEP85Q6P2H3 762 aa9.04□□□□□ -0.96
TMC1-204ENST00000486417 ZNF790Q6PG37 636 aa9.04□□□□□ -0.96
TMC1-204ENST00000486417 ANKRD44Q8N8A2 993 aa9.04□□□□□ -0.96
TMC1-204ENST00000486417 DOT1LQ8TEK3 1739 aa9.03□□□□□ -0.96
TMC1-204ENST00000486417 ADCY9O60503 1353 aa9.03□□□□□ -0.96
TMC1-204ENST00000486417 AFDNP55196 1824 aaKnown RBP9.03□□□□□ -0.96
TMC1-204ENST00000486417 PRAMEF22A3QJZ6 481 aa9.03□□□□□ -0.96
TMC1-204ENST00000486417 EVA1CP58658 441 aa9.03□□□□□ -0.96
TMC1-204ENST00000486417 SLC39A6Q13433 755 aa9.03□□□□□ -0.96
TMC1-204ENST00000486417 MAMSTRQ6ZN01 415 aa9.03□□□□□ -0.96
TMC1-204ENST00000486417 NFATC2IPQ8NCF5 419 aa9.03□□□□□ -0.96
TMC1-204ENST00000486417 OTUD5Q96G74 571 aa9.03□□□□□ -0.96
TMC1-204ENST00000486417 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.03□□□□□ -0.96
TMC1-204ENST00000486417 BTG4Q9NY30 223 aa9.03□□□□□ -0.96
TMC1-204ENST00000486417 DBF4Q9UBU7 674 aaPredicted RBP9.03□□□□□ -0.96
TMC1-204ENST00000486417 LIMD1Q9UGP4 676 aa9.03□□□□□ -0.96
TMC1-204ENST00000486417 NUP188Q5SRE5 1749 aa9.03□□□□□ -0.96
TMC1-204ENST00000486417 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.02□□□□□ -0.97
TMC1-204ENST00000486417 TNS2Q63HR2 1409 aa9.02□□□□□ -0.97
TMC1-204ENST00000486417 ANP32AP39687 249 aaKnown RBP9.02□□□□□ -0.97
TMC1-204ENST00000486417 CABP4P57796 275 aa9.02□□□□□ -0.97
TMC1-204ENST00000486417 CHD1LQ86WJ1 897 aa9.02□□□□□ -0.97
TMC1-204ENST00000486417 RPAP2Q8IXW5 612 aaPredicted RBP9.02□□□□□ -0.97
TMC1-204ENST00000486417 PNMA3Q9UL41 463 aa9.02□□□□□ -0.97
TMC1-204ENST00000486417 TRIM6-TRIM34B2RNG4 842 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms