RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 ZNF541Q9H0D2 1346 aa27.36■■□□□ 1.97
LMBR1-217ENST00000485985 LAMB2P55268 1798 aa27.35■■□□□ 1.97
LMBR1-217ENST00000485985 CAPN15O75808 1086 aa27.35■■□□□ 1.97
LMBR1-217ENST00000485985 PROSER3Q2NL68 480 aa27.35■■□□□ 1.97
LMBR1-217ENST00000485985 PASKQ96RG2 1323 aa27.35■■□□□ 1.97
LMBR1-217ENST00000485985 IBTKQ9P2D0 1353 aaPredicted RBP27.35■■□□□ 1.97
LMBR1-217ENST00000485985 EIF2S2P20042 333 aaKnown RBP27.34■■□□□ 1.97
LMBR1-217ENST00000485985 NUTM1Q86Y26 1132 aa27.34■■□□□ 1.97
LMBR1-217ENST00000485985 NYXQ9GZU5 481 aa27.34■■□□□ 1.97
LMBR1-217ENST00000485985 RIC1Q4ADV7 1423 aa27.33■■□□□ 1.97
LMBR1-217ENST00000485985 ANXA1P04083 346 aa27.33■■□□□ 1.97
LMBR1-217ENST00000485985 GPTP24298 496 aa27.33■■□□□ 1.97
LMBR1-217ENST00000485985 IARSP41252 1262 aaKnown RBP27.33■■□□□ 1.97
LMBR1-217ENST00000485985 KRT24Q2M2I5 525 aa27.33■■□□□ 1.97
LMBR1-217ENST00000485985 CRY2Q49AN0 593 aa27.33■■□□□ 1.97
LMBR1-217ENST00000485985 SYNE4Q8N205 404 aa27.33■■□□□ 1.97
LMBR1-217ENST00000485985 CHL1O00533 1208 aa27.32■■□□□ 1.96
LMBR1-217ENST00000485985 HACL1Q9UJ83 578 aa27.32■■□□□ 1.96
LMBR1-217ENST00000485985 FZD9O00144 591 aa27.31■■□□□ 1.96
LMBR1-217ENST00000485985 EAPPQ56P03 285 aaPredicted RBP27.31■■□□□ 1.96
LMBR1-217ENST00000485985 GIGYF2Q6Y7W6 1299 aaKnown RBP27.31■■□□□ 1.96
LMBR1-217ENST00000485985 ITGBL1O95965 494 aaPredicted RBP27.3■■□□□ 1.96
LMBR1-217ENST00000485985 ZNF34Q8IZ26 560 aa27.3■■□□□ 1.96
LMBR1-217ENST00000485985 SNED1Q8TER0 1413 aa27.3■■□□□ 1.96
LMBR1-217ENST00000485985 EPHX2P34913 555 aa27.29■■□□□ 1.96
LMBR1-217ENST00000485985 NECTIN2Q92692 538 aa27.29■■□□□ 1.96
LMBR1-217ENST00000485985 PSMD1Q99460 953 aa27.29■■□□□ 1.96
LMBR1-217ENST00000485985 CNTNAP1P78357 1384 aa27.29■■□□□ 1.96
LMBR1-217ENST00000485985 SUSD4Q5VX71 490 aa27.28■■□□□ 1.96
LMBR1-217ENST00000485985 CLEC11AQ9Y240 323 aa27.28■■□□□ 1.96
LMBR1-217ENST00000485985 LAS1LQ9Y4W2 734 aaKnown RBP27.28■■□□□ 1.96
LMBR1-217ENST00000485985 RNF123Q5XPI4 1314 aa27.27■■□□□ 1.96
LMBR1-217ENST00000485985 NTSR2O95665 410 aa27.27■■□□□ 1.96
LMBR1-217ENST00000485985 HOXA10P31260 410 aaPredicted RBP27.27■■□□□ 1.96
LMBR1-217ENST00000485985 CC2D2BQ6DHV5 1058 aa27.27■■□□□ 1.96
LMBR1-217ENST00000485985 PNMA8AQ86V59 439 aaPredicted RBP27.27■■□□□ 1.96
LMBR1-217ENST00000485985 GPC2Q8N158 579 aa27.27■■□□□ 1.96
LMBR1-217ENST00000485985 ADAMTSL1Q8N6G6 1762 aa27.27■■□□□ 1.96
LMBR1-217ENST00000485985 TMEM88BA6NKF7 163 aa27.26■■□□□ 1.95
LMBR1-217ENST00000485985 JDP2Q8WYK2 163 aa27.26■■□□□ 1.95
LMBR1-217ENST00000485985 RPGRQ92834 1020 aaKnown RBP27.25■■□□□ 1.95
LMBR1-217ENST00000485985 C3orf67Q6ZVT6 689 aa27.23■■□□□ 1.95
LMBR1-217ENST00000485985 XAGE3Q8WTP9 111 aa27.23■■□□□ 1.95
LMBR1-217ENST00000485985 DDX60Q8IY21 1712 aaKnown RBP27.23■■□□□ 1.95
LMBR1-217ENST00000485985 TAF1P21675 1872 aa27.22■■□□□ 1.95
LMBR1-217ENST00000485985 VEGFBP49765 207 aa27.22■■□□□ 1.95
LMBR1-217ENST00000485985 GRIPAP1Q4V328 841 aa27.22■■□□□ 1.95
LMBR1-217ENST00000485985 COPS6Q7L5N1 327 aa27.22■■□□□ 1.95
LMBR1-217ENST00000485985 CNTROBQ8N137 903 aa27.22■■□□□ 1.95
LMBR1-217ENST00000485985 CHPF2Q9P2E5 772 aa27.22■■□□□ 1.95
LMBR1-217ENST00000485985 COL4A5P29400 1685 aa27.21■■□□□ 1.95
LMBR1-217ENST00000485985 APAF1O14727 1248 aa27.21■■□□□ 1.95
LMBR1-217ENST00000485985 FOXN1O15353 648 aa27.21■■□□□ 1.95
LMBR1-217ENST00000485985 EIF6P56537 245 aaKnown RBP27.21■■□□□ 1.95
LMBR1-217ENST00000485985 AIMP1Q12904 312 aaKnown RBP27.21■■□□□ 1.95
LMBR1-217ENST00000485985 PARP10Q53GL7 1025 aa27.21■■□□□ 1.95
LMBR1-217ENST00000485985 MAP1SQ66K74 1059 aaPredicted RBP27.21■■□□□ 1.95
LMBR1-217ENST00000485985 SLC51AQ86UW1 340 aa27.21■■□□□ 1.95
LMBR1-217ENST00000485985 CFAP44Q96MT7 982 aa27.21■■□□□ 1.95
LMBR1-217ENST00000485985 CRAMP1Q96RY5 1269 aa27.21■■□□□ 1.95
LMBR1-217ENST00000485985 DDX21Q9NR30 783 aaKnown RBP eCLIP27.21■■□□□ 1.95
LMBR1-217ENST00000485985 RBM17Q96I25 401 aaKnown RBP27.2■■□□□ 1.94
LMBR1-217ENST00000485985 MBIPQ9NS73 344 aa27.2■■□□□ 1.94
LMBR1-217ENST00000485985 HDGFL1Q5TGJ6 251 aa27.19■■□□□ 1.94
LMBR1-217ENST00000485985 PPP1R42Q7Z4L9 355 aa27.19■■□□□ 1.94
LMBR1-217ENST00000485985 GJA3Q9Y6H8 435 aa27.19■■□□□ 1.94
LMBR1-217ENST00000485985 HOXB7P09629 217 aa27.18■■□□□ 1.94
LMBR1-217ENST00000485985 CCDC184Q52MB2 194 aa27.18■■□□□ 1.94
LMBR1-217ENST00000485985 LARGE2Q8N3Y3 721 aa27.18■■□□□ 1.94
LMBR1-217ENST00000485985 TCERG1O14776 1098 aaKnown RBP27.17■■□□□ 1.94
LMBR1-217ENST00000485985 PPEF1O14829 653 aaPredicted RBP27.17■■□□□ 1.94
LMBR1-217ENST00000485985 ZNF853P0CG23 659 aa27.17■■□□□ 1.94
LMBR1-217ENST00000485985 UTP14AQ9BVJ6 771 aaKnown RBP27.17■■□□□ 1.94
LMBR1-217ENST00000485985 RASSF10A6NK89 507 aa27.15■■□□□ 1.94
LMBR1-217ENST00000485985 LMOD1P29536 600 aaPredicted RBP27.15■■□□□ 1.94
LMBR1-217ENST00000485985 DUSP27Q5VZP5 1158 aa27.15■■□□□ 1.94
LMBR1-217ENST00000485985 NLRP10Q86W26 655 aa27.15■■□□□ 1.94
LMBR1-217ENST00000485985 AIDAQ96BJ3 306 aa27.15■■□□□ 1.94
LMBR1-217ENST00000485985 NLRP3Q96P20 1036 aa27.15■■□□□ 1.94
LMBR1-217ENST00000485985 PRDM10Q9NQV6 1147 aa27.15■■□□□ 1.94
LMBR1-217ENST00000485985 LTBP1Q14766 1721 aa27.15■■□□□ 1.94
LMBR1-217ENST00000485985 DEFB115Q30KQ5 88 aa27.14■■□□□ 1.94
LMBR1-217ENST00000485985 HSP90AB3PQ58FF7 597 aa27.14■■□□□ 1.94
LMBR1-217ENST00000485985 WBP1LQ9NX94 342 aa27.14■■□□□ 1.94
LMBR1-217ENST00000485985 EPS15P42566 896 aa27.13■■□□□ 1.93
LMBR1-217ENST00000485985 CTCFP49711 727 aaPredicted RBP27.13■■□□□ 1.93
LMBR1-217ENST00000485985 SCNN1DP51172 638 aa27.13■■□□□ 1.93
LMBR1-217ENST00000485985 TCIRG1Q13488 830 aa27.13■■□□□ 1.93
LMBR1-217ENST00000485985 SLC10A5Q5PT55 438 aa27.13■■□□□ 1.93
LMBR1-217ENST00000485985 IFT57Q9NWB7 429 aa27.13■■□□□ 1.93
LMBR1-217ENST00000485985 ZEB1P37275 1124 aaPredicted RBP27.12■■□□□ 1.93
LMBR1-217ENST00000485985 DBF4Q9UBU7 674 aaPredicted RBP27.12■■□□□ 1.93
LMBR1-217ENST00000485985 LRRC37AA6NMS7 1700 aa27.12■■□□□ 1.93
LMBR1-217ENST00000485985 NIM1KQ8IY84 436 aa27.11■■□□□ 1.93
LMBR1-217ENST00000485985 ZNF428Q96B54 188 aa27.11■■□□□ 1.93
LMBR1-217ENST00000485985 TMX4Q9H1E5 349 aaPredicted RBP27.11■■□□□ 1.93
LMBR1-217ENST00000485985 ATP6V0A2Q9Y487 856 aa27.11■■□□□ 1.93
LMBR1-217ENST00000485985 PPIP5K2O43314 1243 aa27.1■■□□□ 1.93
LMBR1-217ENST00000485985 PLBD2Q8NHP8 589 aa27.1■■□□□ 1.93
LMBR1-217ENST00000485985 ABT1Q9ULW3 272 aaKnown RBP27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms