RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 CRISPLD1Q9H336 500 aa6.65□□□□□ -1.34
FN1-222ENST00000485567 PARP2Q9UGN5 583 aa6.65□□□□□ -1.34
FN1-222ENST00000485567 A0A1W2PNR3 127 aa6.64□□□□□ -1.35
FN1-222ENST00000485567 RECKO95980 971 aa6.64□□□□□ -1.35
FN1-222ENST00000485567 RHOQP17081 205 aa6.64□□□□□ -1.35
FN1-222ENST00000485567 C8orf34Q49A92 452 aa6.64□□□□□ -1.35
FN1-222ENST00000485567 TRIM46Q7Z4K8 759 aa6.64□□□□□ -1.35
FN1-222ENST00000485567 CRIPAKQ8N1N5 446 aa6.64□□□□□ -1.35
FN1-222ENST00000485567 HSH2DQ96JZ2 352 aa6.64□□□□□ -1.35
FN1-222ENST00000485567 RTCBQ9Y3I0 505 aaKnown RBP6.64□□□□□ -1.35
FN1-222ENST00000485567 DYRK1BQ9Y463 629 aa6.64□□□□□ -1.35
FN1-222ENST00000485567 PNMA6FA0A0J9YX94 578 aa6.63□□□□□ -1.35
FN1-222ENST00000485567 FIGNL2A6NMB9 653 aa6.63□□□□□ -1.35
FN1-222ENST00000485567 EIF1AYO14602 144 aaKnown RBP6.63□□□□□ -1.35
FN1-222ENST00000485567 F11P03951 625 aa6.63□□□□□ -1.35
FN1-222ENST00000485567 SAMD5Q5TGI4 173 aa6.63□□□□□ -1.35
FN1-222ENST00000485567 PDE12Q6L8Q7 609 aaKnown RBP6.63□□□□□ -1.35
FN1-222ENST00000485567 LRRC69Q6ZNQ3 347 aa6.63□□□□□ -1.35
FN1-222ENST00000485567 NLRP8Q86W28 1048 aa6.63□□□□□ -1.35
FN1-222ENST00000485567 WWC3Q9ULE0 1092 aa6.63□□□□□ -1.35
FN1-222ENST00000485567 SORBS3O60504 671 aa6.62□□□□□ -1.35
FN1-222ENST00000485567 EPB42P16452 691 aa6.62□□□□□ -1.35
FN1-222ENST00000485567 PSMD2Q13200 908 aa6.62□□□□□ -1.35
FN1-222ENST00000485567 LBRQ14739 615 aaKnown RBP6.62□□□□□ -1.35
FN1-222ENST00000485567 ZFP42Q96MM3 310 aa6.62□□□□□ -1.35
FN1-222ENST00000485567 BACH2Q9BYV9 841 aa6.62□□□□□ -1.35
FN1-222ENST00000485567 KCNMB2Q9Y691 235 aa6.62□□□□□ -1.35
FN1-222ENST00000485567 AXIN1O15169 862 aa6.61□□□□□ -1.35
FN1-222ENST00000485567 CPNE3O75131 537 aaKnown RBP6.61□□□□□ -1.35
FN1-222ENST00000485567 TNFRSF21O75509 655 aa6.61□□□□□ -1.35
FN1-222ENST00000485567 EGFRP00533 1210 aa6.61□□□□□ -1.35
FN1-222ENST00000485567 BMP1P13497 986 aa6.61□□□□□ -1.35
FN1-222ENST00000485567 GNA15P30679 374 aa6.61□□□□□ -1.35
FN1-222ENST00000485567 TYRO3Q06418 890 aa6.61□□□□□ -1.35
FN1-222ENST00000485567 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.61□□□□□ -1.352e-55■□□□□ 9.1
FN1-222ENST00000485567 CMTR1Q8N1G2 835 aaKnown RBP6.61□□□□□ -1.35
FN1-222ENST00000485567 PGBD3Q8N328 593 aa6.61□□□□□ -1.35
FN1-222ENST00000485567 CFHR5Q9BXR6 569 aa6.61□□□□□ -1.35
FN1-222ENST00000485567 MRS2Q9HD23 443 aa6.61□□□□□ -1.35
FN1-222ENST00000485567 GJA3Q9Y6H8 435 aa6.61□□□□□ -1.35
FN1-222ENST00000485567 A6NHS1 94 aa6.6□□□□□ -1.35
FN1-222ENST00000485567 UBAP1LF5GYI3 381 aa6.6□□□□□ -1.35
FN1-222ENST00000485567 NRG2O14511 850 aaPredicted RBP6.6□□□□□ -1.35
FN1-222ENST00000485567 SCAMP3O14828 347 aaKnown RBP6.6□□□□□ -1.35
FN1-222ENST00000485567 KCNQ4P56696 695 aa6.6□□□□□ -1.35
FN1-222ENST00000485567 ORC1Q13415 861 aa6.6□□□□□ -1.35
FN1-222ENST00000485567 TSNAXIP1Q2TAA8 658 aa6.6□□□□□ -1.35
FN1-222ENST00000485567 PKDCCQ504Y2 493 aa6.6□□□□□ -1.35
FN1-222ENST00000485567 LDLRAD1Q5T700 205 aa6.6□□□□□ -1.35
FN1-222ENST00000485567 CEP63Q96MT8 703 aa6.6□□□□□ -1.35
FN1-222ENST00000485567 SETDB2Q96T68 719 aa6.6□□□□□ -1.35
FN1-222ENST00000485567 ZFYVE28Q9HCC9 887 aa6.6□□□□□ -1.35
FN1-222ENST00000485567 AK5Q9Y6K8 562 aa6.6□□□□□ -1.35
FN1-222ENST00000485567 GIPC1O14908 333 aa6.59□□□□□ -1.35
FN1-222ENST00000485567 GRNP28799 593 aaKnown RBP6.59□□□□□ -1.35
FN1-222ENST00000485567 TRIP4Q15650 581 aaPredicted RBP6.59□□□□□ -1.35
FN1-222ENST00000485567 EFHC2Q5JST6 749 aa6.59□□□□□ -1.35
FN1-222ENST00000485567 ZNF438Q7Z4V0 828 aa6.59□□□□□ -1.35
FN1-222ENST00000485567 SNX29Q8TEQ0 813 aa6.59□□□□□ -1.35
FN1-222ENST00000485567 ELP3Q9H9T3 547 aa6.59□□□□□ -1.35
FN1-222ENST00000485567 RNF19AQ9NV58 838 aa6.59□□□□□ -1.35
FN1-222ENST00000485567 DNMT3LQ9UJW3 386 aa6.59□□□□□ -1.35
FN1-222ENST00000485567 GFRA3O60609 400 aa6.58□□□□□ -1.36
FN1-222ENST00000485567 FIGNL1Q6PIW4 674 aa6.58□□□□□ -1.36
FN1-222ENST00000485567 PMEPA1Q969W9 287 aa6.58□□□□□ -1.36
FN1-222ENST00000485567 FAM161BQ96MY7 647 aa6.58□□□□□ -1.36
FN1-222ENST00000485567 RUBCNLQ9H714 662 aa6.58□□□□□ -1.36
FN1-222ENST00000485567 METTL5Q9NRN9 209 aaKnown RBP6.58□□□□□ -1.36
FN1-222ENST00000485567 SPG7Q9UQ90 795 aa6.58□□□□□ -1.36
FN1-222ENST00000485567 USP20Q9Y2K6 914 aa6.58□□□□□ -1.36
FN1-222ENST00000485567 SENP3-EIF4A1A0A087X0R7 540 aa6.57□□□□□ -1.36
FN1-222ENST00000485567 PHACTR2O75167 634 aa6.57□□□□□ -1.36
FN1-222ENST00000485567 XYLBO75191 536 aa6.57□□□□□ -1.36
FN1-222ENST00000485567 LAMC2Q13753 1193 aa6.57□□□□□ -1.36
FN1-222ENST00000485567 LAPTM4AQ15012 233 aa6.57□□□□□ -1.36
FN1-222ENST00000485567 NLRP13Q86W25 1043 aa6.57□□□□□ -1.36
FN1-222ENST00000485567 TMEM87AQ8NBN3 555 aa6.57□□□□□ -1.36
FN1-222ENST00000485567 CCDC74AQ96AQ1 378 aa6.57□□□□□ -1.36
FN1-222ENST00000485567 C8orf37Q96NL8 207 aa6.57□□□□□ -1.36
FN1-222ENST00000485567 GAS2L1Q99501 681 aaPredicted RBP6.57□□□□□ -1.36
FN1-222ENST00000485567 ZCCHC2Q9C0B9 1178 aaKnown RBP6.57□□□□□ -1.36
FN1-222ENST00000485567 GPAMQ9HCL2 828 aa6.57□□□□□ -1.36
FN1-222ENST00000485567 BRD7Q9NPI1 651 aa6.57□□□□□ -1.36
FN1-222ENST00000485567 VTI1BQ9UEU0 232 aa6.57□□□□□ -1.36
FN1-222ENST00000485567 FOXD3Q9UJU5 478 aaPredicted RBP6.57□□□□□ -1.36
FN1-222ENST00000485567 MAN1A2O60476 641 aa6.56□□□□□ -1.36
FN1-222ENST00000485567 FAM157BP0CG42 384 aa6.56□□□□□ -1.36
FN1-222ENST00000485567 ATP13A2Q9NQ11 1180 aa6.56□□□□□ -1.36
FN1-222ENST00000485567 TMEM63CQ9P1W3 806 aa6.56□□□□□ -1.36
FN1-222ENST00000485567 KCNH4Q9UQ05 1017 aa6.56□□□□□ -1.36
FN1-222ENST00000485567 PCDHGC4Q9Y5F7 938 aa6.56□□□□□ -1.36
FN1-222ENST00000485567 SLC35F4A4IF30 521 aa6.55□□□□□ -1.36
FN1-222ENST00000485567 H7C1W4 665 aa6.55□□□□□ -1.36
FN1-222ENST00000485567 ATXN7O15265 892 aaPredicted RBP6.55□□□□□ -1.36
FN1-222ENST00000485567 EFSO43281 561 aa6.55□□□□□ -1.36
FN1-222ENST00000485567 EIF4BP23588 611 aaKnown RBP6.55□□□□□ -1.36
FN1-222ENST00000485567 HDLBPQ00341 1268 aaKnown RBP6.55□□□□□ -1.36
FN1-222ENST00000485567 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.55□□□□□ -1.361e-13■■□□□ 11.8
FN1-222ENST00000485567 TTC39BQ5VTQ0 682 aaPredicted RBP6.55□□□□□ -1.36
FN1-222ENST00000485567 GALNT12Q8IXK2 581 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms