RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 C3orf67Q6ZVT6 689 aa25.26■■□□□ 1.63
COL27A1-205ENST00000485397 BABAM1Q9NWV8 329 aa25.26■■□□□ 1.63
COL27A1-205ENST00000485397 LMOD3Q0VAK6 560 aa25.25■■□□□ 1.63
COL27A1-205ENST00000485397 SLC51AQ86UW1 340 aa25.25■■□□□ 1.63
COL27A1-205ENST00000485397 NECTIN2Q92692 538 aa25.25■■□□□ 1.63
COL27A1-205ENST00000485397 MYBBP1AQ9BQG0 1328 aaKnown RBP25.25■■□□□ 1.63
COL27A1-205ENST00000485397 RIC1Q4ADV7 1423 aa25.25■■□□□ 1.63
COL27A1-205ENST00000485397 FZD9O00144 591 aa25.24■■□□□ 1.63
COL27A1-205ENST00000485397 PPP1R42Q7Z4L9 355 aa25.24■■□□□ 1.63
COL27A1-205ENST00000485397 PSMD1Q99460 953 aa25.24■■□□□ 1.63
COL27A1-205ENST00000485397 TCERG1O14776 1098 aaKnown RBP25.23■■□□□ 1.63
COL27A1-205ENST00000485397 PARP10Q53GL7 1025 aa25.23■■□□□ 1.63
COL27A1-205ENST00000485397 COL13A1Q5TAT6 717 aaPredicted RBP25.23■■□□□ 1.63
COL27A1-205ENST00000485397 CC2D2BQ6DHV5 1058 aa25.23■■□□□ 1.63
COL27A1-205ENST00000485397 LDHDQ86WU2 507 aa25.23■■□□□ 1.63
COL27A1-205ENST00000485397 RBM17Q96I25 401 aaKnown RBP25.23■■□□□ 1.63
COL27A1-205ENST00000485397 EAPPQ56P03 285 aaPredicted RBP25.22■■□□□ 1.63
COL27A1-205ENST00000485397 CRAMP1Q96RY5 1269 aa25.22■■□□□ 1.63
COL27A1-205ENST00000485397 HACL1Q9UJ83 578 aa25.22■■□□□ 1.63
COL27A1-205ENST00000485397 SCN4AP35499 1836 aa25.21■■□□□ 1.63
COL27A1-205ENST00000485397 AIMP1Q12904 312 aaKnown RBP25.21■■□□□ 1.63
COL27A1-205ENST00000485397 KRT24Q2M2I5 525 aa25.21■■□□□ 1.63
COL27A1-205ENST00000485397 COPS6Q7L5N1 327 aa25.21■■□□□ 1.63
COL27A1-205ENST00000485397 UTP14AQ9BVJ6 771 aaKnown RBP25.21■■□□□ 1.63
COL27A1-205ENST00000485397 CREBZFQ9NS37 354 aa25.21■■□□□ 1.63
COL27A1-205ENST00000485397 RNF123Q5XPI4 1314 aa25.2■■□□□ 1.62
COL27A1-205ENST00000485397 PPEF1O14829 653 aaPredicted RBP25.2■■□□□ 1.62
COL27A1-205ENST00000485397 EPHX2P34913 555 aa25.2■■□□□ 1.62
COL27A1-205ENST00000485397 XAGE3Q8WTP9 111 aa25.2■■□□□ 1.62
COL27A1-205ENST00000485397 JDP2Q8WYK2 163 aa25.2■■□□□ 1.62
COL27A1-205ENST00000485397 NLRP3Q96P20 1036 aa25.2■■□□□ 1.62
COL27A1-205ENST00000485397 HSPA1AP0DMV8 641 aaKnown RBP25.19■■□□□ 1.62
COL27A1-205ENST00000485397 HSPA1BP0DMV9 641 aaKnown RBP25.19■■□□□ 1.62
COL27A1-205ENST00000485397 SLC10A5Q5PT55 438 aa25.19■■□□□ 1.62
COL27A1-205ENST00000485397 RUNDC1Q96C34 613 aa25.19■■□□□ 1.62
COL27A1-205ENST00000485397 MKRN1Q9UHC7 482 aaKnown RBP25.19■■□□□ 1.62
COL27A1-205ENST00000485397 TRIM35Q9UPQ4 493 aa25.19■■□□□ 1.62
COL27A1-205ENST00000485397 CLEC11AQ9Y240 323 aa25.19■■□□□ 1.62
COL27A1-205ENST00000485397 LAS1LQ9Y4W2 734 aaKnown RBP25.19■■□□□ 1.62
COL27A1-205ENST00000485397 PASKQ96RG2 1323 aa25.18■■□□□ 1.62
COL27A1-205ENST00000485397 COL4A5P29400 1685 aa25.18■■□□□ 1.62
COL27A1-205ENST00000485397 CHL1O00533 1208 aa25.18■■□□□ 1.62
COL27A1-205ENST00000485397 GPC2Q8N158 579 aa25.18■■□□□ 1.62
COL27A1-205ENST00000485397 WDR43Q15061 677 aaKnown RBP eCLIP25.17■■□□□ 1.62
COL27A1-205ENST00000485397 ITGBL1O95965 494 aaPredicted RBP25.16■■□□□ 1.62
COL27A1-205ENST00000485397 EIF6P56537 245 aaKnown RBP25.16■■□□□ 1.62
COL27A1-205ENST00000485397 GRIPAP1Q4V328 841 aa25.16■■□□□ 1.62
COL27A1-205ENST00000485397 NLRP10Q86W26 655 aa25.16■■□□□ 1.62
COL27A1-205ENST00000485397 LARGE2Q8N3Y3 721 aa25.16■■□□□ 1.62
COL27A1-205ENST00000485397 DDX21Q9NR30 783 aaKnown RBP eCLIP25.16■■□□□ 1.62
COL27A1-205ENST00000485397 ADAMTS8Q9UP79 889 aa25.16■■□□□ 1.62
COL27A1-205ENST00000485397 GJA3Q9Y6H8 435 aa25.16■■□□□ 1.62
COL27A1-205ENST00000485397 HSP90AB3PQ58FF7 597 aa25.15■■□□□ 1.62
COL27A1-205ENST00000485397 HCLS1P14317 486 aaPredicted RBP25.14■■□□□ 1.62
COL27A1-205ENST00000485397 TCIRG1Q13488 830 aa25.14■■□□□ 1.62
COL27A1-205ENST00000485397 ABCC4O15439 1325 aa25.13■■□□□ 1.61
COL27A1-205ENST00000485397 PNMA8AQ86V59 439 aaPredicted RBP25.13■■□□□ 1.61
COL27A1-205ENST00000485397 CHPF2Q9P2E5 772 aa25.13■■□□□ 1.61
COL27A1-205ENST00000485397 ATP6V0A2Q9Y487 856 aa25.13■■□□□ 1.61
COL27A1-205ENST00000485397 MAP1SQ66K74 1059 aaPredicted RBP25.12■■□□□ 1.61
COL27A1-205ENST00000485397 ZNF428Q96B54 188 aa25.12■■□□□ 1.61
COL27A1-205ENST00000485397 ADAMTSL1Q8N6G6 1762 aa25.11■■□□□ 1.61
COL27A1-205ENST00000485397 TRMT112Q9UI30 125 aaKnown RBP25.11■■□□□ 1.61
COL27A1-205ENST00000485397 TMEM88BA6NKF7 163 aa25.1■■□□□ 1.61
COL27A1-205ENST00000485397 PPIP5K2O43314 1243 aa25.1■■□□□ 1.61
COL27A1-205ENST00000485397 HDGFL1Q5TGJ6 251 aa25.1■■□□□ 1.61
COL27A1-205ENST00000485397 NIM1KQ8IY84 436 aa25.1■■□□□ 1.61
COL27A1-205ENST00000485397 CNTROBQ8N137 903 aa25.1■■□□□ 1.61
COL27A1-205ENST00000485397 TMX4Q9H1E5 349 aaPredicted RBP25.1■■□□□ 1.61
COL27A1-205ENST00000485397 CNTNAP1P78357 1384 aa25.09■■□□□ 1.61
COL27A1-205ENST00000485397 SCNN1DP51172 638 aa25.09■■□□□ 1.61
COL27A1-205ENST00000485397 AOC3Q16853 763 aa25.09■■□□□ 1.61
COL27A1-205ENST00000485397 SH3TC1Q8TE82 1336 aa25.09■■□□□ 1.61
COL27A1-205ENST00000485397 ANKRD36CQ5JPF3 1778 aa25.08■■□□□ 1.61
COL27A1-205ENST00000485397 BBOX1O75936 387 aa25.08■■□□□ 1.61
COL27A1-205ENST00000485397 LMOD1P29536 600 aaPredicted RBP25.08■■□□□ 1.61
COL27A1-205ENST00000485397 EPS15P42566 896 aa25.08■■□□□ 1.61
COL27A1-205ENST00000485397 LTBP1Q14766 1721 aa25.07■■□□□ 1.6
COL27A1-205ENST00000485397 SP8Q8IXZ3 490 aa25.07■■□□□ 1.6
COL27A1-205ENST00000485397 TNS4Q8IZW8 715 aa25.07■■□□□ 1.6
COL27A1-205ENST00000485397 PRKRIP1Q9H875 184 aaPredicted RBP25.07■■□□□ 1.6
COL27A1-205ENST00000485397 HOXB7P09629 217 aa25.06■■□□□ 1.6
COL27A1-205ENST00000485397 DDX46Q7L014 1031 aaKnown RBP25.06■■□□□ 1.6
COL27A1-205ENST00000485397 PLBD2Q8NHP8 589 aa25.06■■□□□ 1.6
COL27A1-205ENST00000485397 CFAP44Q96MT7 982 aa25.06■■□□□ 1.6
COL27A1-205ENST00000485397 RTFDC1Q9BY42 306 aaPredicted RBP25.06■■□□□ 1.6
COL27A1-205ENST00000485397 PCNTO95613 3336 aa25.05■■□□□ 1.6
COL27A1-205ENST00000485397 VEGFBP49765 207 aa25.05■■□□□ 1.6
COL27A1-205ENST00000485397 DUSP27Q5VZP5 1158 aa25.05■■□□□ 1.6
COL27A1-205ENST00000485397 DPP8Q6V1X1 898 aaPredicted RBP25.05■■□□□ 1.6
COL27A1-205ENST00000485397 ANKRD13DQ6ZTN6 518 aa25.05■■□□□ 1.6
COL27A1-205ENST00000485397 DBF4Q9UBU7 674 aaPredicted RBP25.05■■□□□ 1.6
COL27A1-205ENST00000485397 LAMB2P55268 1798 aa25.05■■□□□ 1.6
COL27A1-205ENST00000485397 GRAPQ13588 217 aa25.04■■□□□ 1.6
COL27A1-205ENST00000485397 MPNDQ8N594 471 aa25.04■■□□□ 1.6
COL27A1-205ENST00000485397 SUPT20HQ8NEM7 779 aa25.04■■□□□ 1.6
COL27A1-205ENST00000485397 GRAPLQ8TC17 118 aaPredicted RBP25.04■■□□□ 1.6
COL27A1-205ENST00000485397 ISCA1Q9BUE6 129 aa25.04■■□□□ 1.6
COL27A1-205ENST00000485397 VPS33BQ9H267 617 aa25.04■■□□□ 1.6
COL27A1-205ENST00000485397 MBIPQ9NS73 344 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms