RNA–Protein interactions for RNA: ENST00000484404.1

ITGA4-210, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-210ENST00000484404 DDX21Q9NR30 783 aaKnown RBP eCLIP17.87■□□□□ 0.45
ITGA4-210ENST00000484404 RIC1Q4ADV7 1423 aa17.87■□□□□ 0.45
ITGA4-210ENST00000484404 GLTPD2A6NH11 291 aa17.86■□□□□ 0.45
ITGA4-210ENST00000484404 SOGA3Q5TF21 947 aa17.86■□□□□ 0.45
ITGA4-210ENST00000484404 PPP1R42Q7Z4L9 355 aa17.86■□□□□ 0.45
ITGA4-210ENST00000484404 SYNE4Q8N205 404 aa17.86■□□□□ 0.45
ITGA4-210ENST00000484404 MRS2Q9HD23 443 aa17.86■□□□□ 0.45
ITGA4-210ENST00000484404 ZNF277Q9NRM2 450 aaPredicted RBP17.86■□□□□ 0.45
ITGA4-210ENST00000484404 LTBP3Q9NS15 1303 aa17.86■□□□□ 0.45
ITGA4-210ENST00000484404 ZC3H4Q9UPT8 1303 aaKnown RBP17.86■□□□□ 0.45
ITGA4-210ENST00000484404 CRY2Q49AN0 593 aa17.85■□□□□ 0.45
ITGA4-210ENST00000484404 PARP10Q53GL7 1025 aa17.85■□□□□ 0.45
ITGA4-210ENST00000484404 UTP14AQ9BVJ6 771 aaKnown RBP17.85■□□□□ 0.45
ITGA4-210ENST00000484404 IFT57Q9NWB7 429 aa17.85■□□□□ 0.45
ITGA4-210ENST00000484404 COL4A5P29400 1685 aa17.84■□□□□ 0.45
ITGA4-210ENST00000484404 ANP32CO43423 234 aa17.84■□□□□ 0.45
ITGA4-210ENST00000484404 ZNF853P0CG23 659 aa17.84■□□□□ 0.45
ITGA4-210ENST00000484404 ALDH1B1P30837 517 aa17.84■□□□□ 0.45
ITGA4-210ENST00000484404 GNAI1P63096 354 aa17.84■□□□□ 0.45
ITGA4-210ENST00000484404 NLRP10Q86W26 655 aa17.84■□□□□ 0.45
ITGA4-210ENST00000484404 SPEF2Q9C093 1822 aa17.84■□□□□ 0.45
ITGA4-210ENST00000484404 HCLS1P14317 486 aaPredicted RBP17.83■□□□□ 0.44
ITGA4-210ENST00000484404 FKBP4Q02790 459 aaKnown RBP eCLIP17.83■□□□□ 0.44
ITGA4-210ENST00000484404 RBM46Q8TBY0 533 aaKnown RBP17.83■□□□□ 0.44
ITGA4-210ENST00000484404 TSR2Q969E8 191 aaKnown RBP17.83■□□□□ 0.44
ITGA4-210ENST00000484404 SALL2Q9Y467 1007 aaPredicted RBP17.83■□□□□ 0.44
ITGA4-210ENST00000484404 COL4A1P02462 1669 aa17.83■□□□□ 0.44
ITGA4-210ENST00000484404 SNED1Q8TER0 1413 aa17.82■□□□□ 0.44
ITGA4-210ENST00000484404 SCN4AP35499 1836 aa17.82■□□□□ 0.44
ITGA4-210ENST00000484404 ATP5J2-PTCD1G3V325 749 aa17.82■□□□□ 0.44
ITGA4-210ENST00000484404 DDNO94850 711 aaPredicted RBP17.82■□□□□ 0.44
ITGA4-210ENST00000484404 HTRA3P83110 453 aa17.82■□□□□ 0.44
ITGA4-210ENST00000484404 HSP90AB3PQ58FF7 597 aa17.82■□□□□ 0.44
ITGA4-210ENST00000484404 C8orf58Q8NAV2 365 aa17.82■□□□□ 0.44
ITGA4-210ENST00000484404 DBF4Q9UBU7 674 aaPredicted RBP17.82■□□□□ 0.44
ITGA4-210ENST00000484404 TRMT112Q9UI30 125 aaKnown RBP17.82■□□□□ 0.44
ITGA4-210ENST00000484404 ZNF541Q9H0D2 1346 aa17.81■□□□□ 0.44
ITGA4-210ENST00000484404 PPEF1O14829 653 aaPredicted RBP17.81■□□□□ 0.44
ITGA4-210ENST00000484404 HOXB7P09629 217 aa17.81■□□□□ 0.44
ITGA4-210ENST00000484404 CALD1Q05682 793 aaKnown RBP17.81■□□□□ 0.44
ITGA4-210ENST00000484404 TCIRG1Q13488 830 aa17.81■□□□□ 0.44
ITGA4-210ENST00000484404 RTL5Q5HYW3 569 aaPredicted RBP17.81■□□□□ 0.44
ITGA4-210ENST00000484404 RBM17Q96I25 401 aaKnown RBP17.81■□□□□ 0.44
ITGA4-210ENST00000484404 PHAXQ9H814 394 aaKnown RBP17.81■□□□□ 0.44
ITGA4-210ENST00000484404 ABCC4O15439 1325 aa17.8■□□□□ 0.44
ITGA4-210ENST00000484404 POTECB2RU33 542 aa17.8■□□□□ 0.44
ITGA4-210ENST00000484404 VEGFAP15692 232 aaPredicted RBP17.8■□□□□ 0.44
ITGA4-210ENST00000484404 DPY19L2Q6NUT2 758 aa17.8■□□□□ 0.44
ITGA4-210ENST00000484404 PLBD2Q8NHP8 589 aa17.8■□□□□ 0.44
ITGA4-210ENST00000484404 NLRP3Q96P20 1036 aa17.8■□□□□ 0.44
ITGA4-210ENST00000484404 LRRC37AA6NMS7 1700 aa17.8■□□□□ 0.44
ITGA4-210ENST00000484404 MYH3P11055 1940 aa17.79■□□□□ 0.44
ITGA4-210ENST00000484404 HOXA10P31260 410 aaPredicted RBP17.79■□□□□ 0.44
ITGA4-210ENST00000484404 IARSP41252 1262 aaKnown RBP17.79■□□□□ 0.44
ITGA4-210ENST00000484404 ANKRD13DQ6ZTN6 518 aa17.79■□□□□ 0.44
ITGA4-210ENST00000484404 RTKN2Q8IZC4 609 aa17.79■□□□□ 0.44
ITGA4-210ENST00000484404 TSPYL6Q8N831 410 aa17.79■□□□□ 0.44
ITGA4-210ENST00000484404 HYPKQ9NX55 129 aa17.79■□□□□ 0.44
ITGA4-210ENST00000484404 SH3TC1Q8TE82 1336 aa17.77■□□□□ 0.44
ITGA4-210ENST00000484404 POTEIP0CG38 1075 aa17.77■□□□□ 0.44
ITGA4-210ENST00000484404 POTEJP0CG39 1038 aa17.77■□□□□ 0.44
ITGA4-210ENST00000484404 APLP1P51693 650 aa17.77■□□□□ 0.44
ITGA4-210ENST00000484404 SMC1BQ8NDV3 1235 aa17.77■□□□□ 0.44
ITGA4-210ENST00000484404 FAM89AQ96GI7 184 aa17.77■□□□□ 0.44
ITGA4-210ENST00000484404 CRAMP1Q96RY5 1269 aa17.77■□□□□ 0.44
ITGA4-210ENST00000484404 LTBP1Q14766 1721 aa17.76■□□□□ 0.43
ITGA4-210ENST00000484404 GOLGA2Q08379 1002 aa17.76■□□□□ 0.43
ITGA4-210ENST00000484404 SLC10A5Q5PT55 438 aa17.76■□□□□ 0.43
ITGA4-210ENST00000484404 RIC3Q7Z5B4 369 aa17.76■□□□□ 0.43
ITGA4-210ENST00000484404 WWC1Q8IX03 1113 aa17.76■□□□□ 0.43
ITGA4-210ENST00000484404 ISCA1Q9BUE6 129 aa17.76■□□□□ 0.43
ITGA4-210ENST00000484404 RNF123Q5XPI4 1314 aa17.75■□□□□ 0.43
ITGA4-210ENST00000484404 CACNA1FO60840 1977 aa17.75■□□□□ 0.43
ITGA4-210ENST00000484404 FSTL1Q12841 308 aa17.75■□□□□ 0.43
ITGA4-210ENST00000484404 FAM9BQ8IZU0 186 aa17.75■□□□□ 0.43
ITGA4-210ENST00000484404 MYD88Q99836 296 aa17.75■□□□□ 0.43
ITGA4-210ENST00000484404 DUOX1Q9NRD9 1551 aa17.74■□□□□ 0.43
ITGA4-210ENST00000484404 JARID2Q92833 1246 aaPredicted RBP17.74■□□□□ 0.43
ITGA4-210ENST00000484404 PSMD1Q99460 953 aa17.74■□□□□ 0.43
ITGA4-210ENST00000484404 DDX46Q7L014 1031 aaKnown RBP17.73■□□□□ 0.43
ITGA4-210ENST00000484404 LARGE2Q8N3Y3 721 aa17.73■□□□□ 0.43
ITGA4-210ENST00000484404 GJA3Q9Y6H8 435 aa17.73■□□□□ 0.43
ITGA4-210ENST00000484404 ADAMTSL1Q8N6G6 1762 aa17.73■□□□□ 0.43
ITGA4-210ENST00000484404 AOC3Q16853 763 aa17.72■□□□□ 0.43
ITGA4-210ENST00000484404 CCDC30Q5VVM6 783 aa17.72■□□□□ 0.43
ITGA4-210ENST00000484404 CC2D2BQ6DHV5 1058 aa17.72■□□□□ 0.43
ITGA4-210ENST00000484404 JDP2Q8WYK2 163 aa17.72■□□□□ 0.43
ITGA4-210ENST00000484404 ATP6V0A2Q9Y487 856 aa17.72■□□□□ 0.43
ITGA4-210ENST00000484404 PPIP5K2O43314 1243 aa17.71■□□□□ 0.43
ITGA4-210ENST00000484404 CCDC27Q2M243 656 aa17.71■□□□□ 0.43
ITGA4-210ENST00000484404 TWISTNBQ3B726 338 aaPredicted RBP17.71■□□□□ 0.43
ITGA4-210ENST00000484404 EAPPQ56P03 285 aaPredicted RBP17.71■□□□□ 0.43
ITGA4-210ENST00000484404 TMX4Q9H1E5 349 aaPredicted RBP17.71■□□□□ 0.43
ITGA4-210ENST00000484404 FANCIQ9NVI1 1328 aa17.71■□□□□ 0.42
ITGA4-210ENST00000484404 FZD9O00144 591 aa17.7■□□□□ 0.42
ITGA4-210ENST00000484404 IRS4O14654 1257 aaPredicted RBP17.7■□□□□ 0.42
ITGA4-210ENST00000484404 GRAPQ13588 217 aa17.7■□□□□ 0.42
ITGA4-210ENST00000484404 G2E3Q7L622 706 aa17.7■□□□□ 0.42
ITGA4-210ENST00000484404 GRAPLQ8TC17 118 aaPredicted RBP17.7■□□□□ 0.42
ITGA4-210ENST00000484404 DPP8Q6V1X1 898 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms