RNA–Protein interactions for RNA: ENST00000482458.1

STK40-208, Transcript of serine/threonine kinase 40, human

TSL 3

Gene STK40, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STK40-208	ENST00000482458	CNTROB	Q8N137	903 aa		33.44	■■■□□ 2.94
STK40-208	ENST00000482458	AIDA	Q96BJ3	306 aa		33.44	■■■□□ 2.94
STK40-208	ENST00000482458	ZBTB3	Q9H5J0	574 aa		33.43	■■■□□ 2.94
STK40-208	ENST00000482458	KDM3B	Q7LBC6	1761 aa		33.42	■■■□□ 2.94
STK40-208	ENST00000482458	HOXA10	P31260	410 aa	Predicted RBP	33.42	■■■□□ 2.94
STK40-208	ENST00000482458	THUMPD2	Q9BTF0	503 aa	Known RBP	33.42	■■■□□ 2.94
STK40-208	ENST00000482458	PRDM10	Q9NQV6	1147 aa		33.42	■■■□□ 2.94
STK40-208	ENST00000482458	GJA3	Q9Y6H8	435 aa		33.42	■■■□□ 2.94
STK40-208	ENST00000482458	UBN2	Q6ZU65	1347 aa		33.42	■■■□□ 2.94
STK40-208	ENST00000482458	EIF6	P56537	245 aa	Known RBP	33.41	■■■□□ 2.94
STK40-208	ENST00000482458	IBTK	Q9P2D0	1353 aa	Predicted RBP	33.41	■■■□□ 2.94
STK40-208	ENST00000482458	NUP98	P52948	1817 aa		33.4	■■■□□ 2.94
STK40-208	ENST00000482458	RIC1	Q4ADV7	1423 aa		33.4	■■■□□ 2.94
STK40-208	ENST00000482458	CTCF	P49711	727 aa	Predicted RBP	33.4	■■■□□ 2.94
STK40-208	ENST00000482458	SUSD4	Q5VX71	490 aa		33.4	■■■□□ 2.94
STK40-208	ENST00000482458	COL4A5	P29400	1685 aa		33.39	■■■□□ 2.94
STK40-208	ENST00000482458	NFE2L2	Q16236	605 aa		33.39	■■■□□ 2.94
STK40-208	ENST00000482458	PLEKHF1	Q96S99	279 aa		33.39	■■■□□ 2.94
STK40-208	ENST00000482458	DLG5	Q8TDM6	1919 aa		33.38	■■■□□ 2.93
STK40-208	ENST00000482458	RASSF10	A6NK89	507 aa		33.37	■■■□□ 2.93
STK40-208	ENST00000482458	DEFB115	Q30KQ5	88 aa		33.37	■■■□□ 2.93
STK40-208	ENST00000482458	GRIPAP1	Q4V328	841 aa		33.37	■■■□□ 2.93
STK40-208	ENST00000482458	LARGE2	Q8N3Y3	721 aa		33.37	■■■□□ 2.93
STK40-208	ENST00000482458	RBM17	Q96I25	401 aa	Known RBP	33.37	■■■□□ 2.93
STK40-208	ENST00000482458	WBP1L	Q9NX94	342 aa		33.37	■■■□□ 2.93
STK40-208	ENST00000482458	LMOD1	P29536	600 aa	Predicted RBP	33.36	■■■□□ 2.93
STK40-208	ENST00000482458	ZNF34	Q8IZ26	560 aa		33.36	■■■□□ 2.93
STK40-208	ENST00000482458	CRAMP1	Q96RY5	1269 aa		33.36	■■■□□ 2.93
STK40-208	ENST00000482458	TCERG1	O14776	1098 aa	Known RBP	33.35	■■■□□ 2.93
STK40-208	ENST00000482458	PPEF1	O14829	653 aa	Predicted RBP	33.35	■■■□□ 2.93
STK40-208	ENST00000482458	NTSR2	O95665	410 aa		33.35	■■■□□ 2.93
STK40-208	ENST00000482458	SLC51A	Q86UW1	340 aa		33.35	■■■□□ 2.93
STK40-208	ENST00000482458	GIGYF2	Q6Y7W6	1299 aa	Known RBP	33.34	■■■□□ 2.93
STK40-208	ENST00000482458	ABT1	Q9ULW3	272 aa	Known RBP	33.34	■■■□□ 2.93
STK40-208	ENST00000482458	ERBB4	Q15303	1308 aa		33.33	■■■□□ 2.93
STK40-208	ENST00000482458	C3orf67	Q6ZVT6	689 aa		33.33	■■■□□ 2.93
STK40-208	ENST00000482458	SCNN1D	P51172	638 aa		33.32	■■■□□ 2.92
STK40-208	ENST00000482458	DDX21	Q9NR30	783 aa	Known RBP eCLIP	33.32	■■■□□ 2.92
STK40-208	ENST00000482458	MAPK8IP3	Q9UPT6	1336 aa		33.31	■■■□□ 2.92
STK40-208	ENST00000482458	EPS15	P42566	896 aa		33.31	■■■□□ 2.92
STK40-208	ENST00000482458	LBX1	P52954	281 aa		33.31	■■■□□ 2.92
STK40-208	ENST00000482458	PPP1R42	Q7Z4L9	355 aa		33.31	■■■□□ 2.92
STK40-208	ENST00000482458	LTBP1	Q14766	1721 aa		33.31	■■■□□ 2.92
STK40-208	ENST00000482458	NIM1K	Q8IY84	436 aa		33.3	■■■□□ 2.92
STK40-208	ENST00000482458	WDR33	Q9C0J8	1336 aa	Known RBP	33.29	■■■□□ 2.92
STK40-208	ENST00000482458	PARP10	Q53GL7	1025 aa		33.29	■■■□□ 2.92
STK40-208	ENST00000482458	PNN	Q9H307	717 aa	Known RBP	33.29	■■■□□ 2.92
STK40-208	ENST00000482458	NLRP3	Q96P20	1036 aa		33.28	■■■□□ 2.92
STK40-208	ENST00000482458	TSPYL4	Q9UJ04	414 aa		33.28	■■■□□ 2.92
STK40-208	ENST00000482458	PPIP5K2	O43314	1243 aa		33.27	■■■□□ 2.92
STK40-208	ENST00000482458	TMX4	Q9H1E5	349 aa	Predicted RBP	33.27	■■■□□ 2.92
STK40-208	ENST00000482458	MAP2K1	Q02750	393 aa	Predicted RBP	33.26	■■■□□ 2.91
STK40-208	ENST00000482458	FMR1	Q06787	632 aa	Known RBP eCLIP	33.26	■■■□□ 2.91
STK40-208	ENST00000482458	HSPA8	P11142	646 aa	Known RBP	33.25	■■■□□ 2.91
STK40-208	ENST00000482458	USP50	Q70EL3	339 aa	Predicted RBP	33.25	■■■□□ 2.91
STK40-208	ENST00000482458	LRP10	Q7Z4F1	713 aa		33.25	■■■□□ 2.91
STK40-208	ENST00000482458	UTP14A	Q9BVJ6	771 aa	Known RBP	33.25	■■■□□ 2.91
STK40-208	ENST00000482458	EIF2S2	P20042	333 aa	Known RBP	33.24	■■■□□ 2.91
STK40-208	ENST00000482458	PDIA6	Q15084	440 aa		33.24	■■■□□ 2.91
STK40-208	ENST00000482458	AOC3	Q16853	763 aa		33.24	■■■□□ 2.91
STK40-208	ENST00000482458	ATP6V0A2	Q9Y487	856 aa		33.24	■■■□□ 2.91
STK40-208	ENST00000482458	SLC10A5	Q5PT55	438 aa		33.23	■■■□□ 2.91
STK40-208	ENST00000482458	TRAF5	O00463	557 aa		33.21	■■■□□ 2.91
STK40-208	ENST00000482458	ANXA1	P04083	346 aa		33.21	■■■□□ 2.91
STK40-208	ENST00000482458	PROSER3	Q2NL68	480 aa		33.21	■■■□□ 2.91
STK40-208	ENST00000482458	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	33.21	■■■□□ 2.91
STK40-208	ENST00000482458	VPS33B	Q9H267	617 aa		33.21	■■■□□ 2.91
STK40-208	ENST00000482458	ABCC4	O15439	1325 aa		33.21	■■■□□ 2.91
STK40-208	ENST00000482458	CAPNS2	Q96L46	248 aa		33.2	■■■□□ 2.91
STK40-208	ENST00000482458	GPRC5D	Q9NZD1	345 aa		33.2	■■■□□ 2.91
STK40-208	ENST00000482458	SUPT20H	Q8NEM7	779 aa		33.19	■■■□□ 2.9
STK40-208	ENST00000482458	ADARB2	Q9NS39	739 aa	Known RBP	33.19	■■■□□ 2.9
STK40-208	ENST00000482458	ECE1	P42892	770 aa		33.18	■■■□□ 2.9
STK40-208	ENST00000482458	RIPK4	P57078	832 aa		33.18	■■■□□ 2.9
STK40-208	ENST00000482458	CST9	Q5W186	159 aa		33.18	■■■□□ 2.9
STK40-208	ENST00000482458	ZNRF3	Q9ULT6	936 aa		33.18	■■■□□ 2.9
STK40-208	ENST00000482458	CXCL9	Q07325	125 aa		33.17	■■■□□ 2.9
STK40-208	ENST00000482458	GRM1	Q13255	1194 aa		33.17	■■■□□ 2.9
STK40-208	ENST00000482458	CYP4F22	Q6NT55	531 aa		33.17	■■■□□ 2.9
STK40-208	ENST00000482458	RTFDC1	Q9BY42	306 aa	Predicted RBP	33.17	■■■□□ 2.9
STK40-208	ENST00000482458	DPP8	Q6V1X1	898 aa	Predicted RBP	33.16	■■■□□ 2.9
STK40-208	ENST00000482458	BBOX1	O75936	387 aa		33.15	■■■□□ 2.9
STK40-208	ENST00000482458	BABAM1	Q9NWV8	329 aa		33.15	■■■□□ 2.9
STK40-208	ENST00000482458	HCLS1	P14317	486 aa	Predicted RBP	33.14	■■■□□ 2.9
STK40-208	ENST00000482458	GMPS	P49915	693 aa	Predicted RBP	33.14	■■■□□ 2.9
STK40-208	ENST00000482458	HSP90AB3P	Q58FF7	597 aa		33.14	■■■□□ 2.9
STK40-208	ENST00000482458	COPS6	Q7L5N1	327 aa		33.14	■■■□□ 2.9
STK40-208	ENST00000482458	NLRP10	Q86W26	655 aa		33.14	■■■□□ 2.9
STK40-208	ENST00000482458	SP8	Q8IXZ3	490 aa		33.14	■■■□□ 2.9
STK40-208	ENST00000482458	NECTIN2	Q92692	538 aa		33.14	■■■□□ 2.9
STK40-208	ENST00000482458	GPR101	Q96P66	508 aa	Predicted RBP	33.14	■■■□□ 2.9
STK40-208	ENST00000482458	TLL2	Q9Y6L7	1015 aa		33.14	■■■□□ 2.9
STK40-208	ENST00000482458	AIMP1	Q12904	312 aa	Known RBP	33.13	■■■□□ 2.89
STK40-208	ENST00000482458	MPND	Q8N594	471 aa		33.13	■■■□□ 2.89
STK40-208	ENST00000482458	XAGE3	Q8WTP9	111 aa		33.13	■■■□□ 2.89
STK40-208	ENST00000482458	BEGAIN	Q9BUH8	593 aa		33.13	■■■□□ 2.89
STK40-208	ENST00000482458	THSD7B	Q9C0I4	1608 aa		33.13	■■■□□ 2.89
STK40-208	ENST00000482458	ABHD8	Q96I13	439 aa		33.12	■■■□□ 2.89
STK40-208	ENST00000482458	TRPM7	Q96QT4	1865 aa		33.1	■■■□□ 2.89
STK40-208	ENST00000482458	LMOD3	Q0VAK6	560 aa		33.1	■■■□□ 2.89

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms