RNA–Protein interactions for RNA: ENST00000480853.1

LSG1-208, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 539 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-208ENST00000480853 BABAM1Q9NWV8 329 aa22.24■■□□□ 1.15
LSG1-208ENST00000480853 ERBB4Q15303 1308 aa22.24■■□□□ 1.15
LSG1-208ENST00000480853 XAGE3Q8WTP9 111 aa22.23■■□□□ 1.15
LSG1-208ENST00000480853 ZNF541Q9H0D2 1346 aa22.23■■□□□ 1.15
LSG1-208ENST00000480853 LMOD3Q0VAK6 560 aa22.22■■□□□ 1.15
LSG1-208ENST00000480853 WDR43Q15061 677 aaKnown RBP eCLIP22.22■■□□□ 1.15
LSG1-208ENST00000480853 RTKN2Q8IZC4 609 aa22.22■■□□□ 1.15
LSG1-208ENST00000480853 HOXA10P31260 410 aaPredicted RBP22.21■■□□□ 1.15
LSG1-208ENST00000480853 IFFO2Q5TF58 517 aa22.21■■□□□ 1.15
LSG1-208ENST00000480853 RPGRQ92834 1020 aaKnown RBP22.21■■□□□ 1.15
LSG1-208ENST00000480853 PRKRIP1Q9H875 184 aaPredicted RBP22.21■■□□□ 1.15
LSG1-208ENST00000480853 IARSP41252 1262 aaKnown RBP22.2■■□□□ 1.14
LSG1-208ENST00000480853 PPP1R42Q7Z4L9 355 aa22.19■■□□□ 1.14
LSG1-208ENST00000480853 UTP14AQ9BVJ6 771 aaKnown RBP22.19■■□□□ 1.14
LSG1-208ENST00000480853 SNED1Q8TER0 1413 aa22.19■■□□□ 1.14
LSG1-208ENST00000480853 CHADLQ6NUI6 762 aa22.18■■□□□ 1.14
LSG1-208ENST00000480853 JMYQ8N9B5 988 aa22.18■■□□□ 1.14
LSG1-208ENST00000480853 RBM17Q96I25 401 aaKnown RBP22.18■■□□□ 1.14
LSG1-208ENST00000480853 IBTKQ9P2D0 1353 aaPredicted RBP22.17■■□□□ 1.14
LSG1-208ENST00000480853 FZD9O00144 591 aa22.17■■□□□ 1.14
LSG1-208ENST00000480853 HCLS1P14317 486 aaPredicted RBP22.17■■□□□ 1.14
LSG1-208ENST00000480853 PARP10Q53GL7 1025 aa22.17■■□□□ 1.14
LSG1-208ENST00000480853 SLC10A5Q5PT55 438 aa22.17■■□□□ 1.14
LSG1-208ENST00000480853 L3MBTL3Q96JM7 780 aaPredicted RBP22.17■■□□□ 1.14
LSG1-208ENST00000480853 CRAMP1Q96RY5 1269 aa22.17■■□□□ 1.14
LSG1-208ENST00000480853 TAF1DQ9H5J8 278 aaPredicted RBP22.17■■□□□ 1.14
LSG1-208ENST00000480853 DDX21Q9NR30 783 aaKnown RBP eCLIP22.17■■□□□ 1.14
LSG1-208ENST00000480853 CHPF2Q9P2E5 772 aa22.17■■□□□ 1.14
LSG1-208ENST00000480853 COL4A5P29400 1685 aa22.17■■□□□ 1.14
LSG1-208ENST00000480853 NLRP10Q86W26 655 aa22.16■■□□□ 1.14
LSG1-208ENST00000480853 NLRP3Q96P20 1036 aa22.16■■□□□ 1.14
LSG1-208ENST00000480853 PSMD1Q99460 953 aa22.16■■□□□ 1.14
LSG1-208ENST00000480853 PCNTO95613 3336 aa22.16■■□□□ 1.14
LSG1-208ENST00000480853 TCIRG1Q13488 830 aa22.15■■□□□ 1.14
LSG1-208ENST00000480853 APAF1O14727 1248 aa22.14■■□□□ 1.13
LSG1-208ENST00000480853 PPEF1O14829 653 aaPredicted RBP22.14■■□□□ 1.13
LSG1-208ENST00000480853 RIC1Q4ADV7 1423 aa22.14■■□□□ 1.13
LSG1-208ENST00000480853 EAPPQ56P03 285 aaPredicted RBP22.13■■□□□ 1.13
LSG1-208ENST00000480853 CC2D2BQ6DHV5 1058 aa22.13■■□□□ 1.13
LSG1-208ENST00000480853 MBIPQ9NS73 344 aa22.13■■□□□ 1.13
LSG1-208ENST00000480853 TAF1P21675 1872 aa22.13■■□□□ 1.13
LSG1-208ENST00000480853 RNF123Q5XPI4 1314 aa22.12■■□□□ 1.13
LSG1-208ENST00000480853 CCDC184Q52MB2 194 aa22.12■■□□□ 1.13
LSG1-208ENST00000480853 HDGFL1Q5TGJ6 251 aa22.12■■□□□ 1.13
LSG1-208ENST00000480853 DUSP27Q5VZP5 1158 aa22.12■■□□□ 1.13
LSG1-208ENST00000480853 CFAP44Q96MT7 982 aa22.12■■□□□ 1.13
LSG1-208ENST00000480853 TRMT112Q9UI30 125 aaKnown RBP22.12■■□□□ 1.13
LSG1-208ENST00000480853 HACL1Q9UJ83 578 aa22.12■■□□□ 1.13
LSG1-208ENST00000480853 GJA3Q9Y6H8 435 aa22.12■■□□□ 1.13
LSG1-208ENST00000480853 SCN4AP35499 1836 aa22.12■■□□□ 1.13
LSG1-208ENST00000480853 ABCC4O15439 1325 aa22.11■■□□□ 1.13
LSG1-208ENST00000480853 IQCA1LA6NCM1 817 aa22.11■■□□□ 1.13
LSG1-208ENST00000480853 JDP2Q8WYK2 163 aa22.11■■□□□ 1.13
LSG1-208ENST00000480853 ATP5J2-PTCD1G3V325 749 aa22.1■■□□□ 1.13
LSG1-208ENST00000480853 ELL2O00472 640 aaPredicted RBP22.1■■□□□ 1.13
LSG1-208ENST00000480853 ZNF853P0CG23 659 aa22.1■■□□□ 1.13
LSG1-208ENST00000480853 EPHX2P34913 555 aa22.1■■□□□ 1.13
LSG1-208ENST00000480853 HSP90AB3PQ58FF7 597 aa22.1■■□□□ 1.13
LSG1-208ENST00000480853 LDHDQ86WU2 507 aa22.1■■□□□ 1.13
LSG1-208ENST00000480853 LARGE2Q8N3Y3 721 aa22.1■■□□□ 1.13
LSG1-208ENST00000480853 CLEC11AQ9Y240 323 aa22.1■■□□□ 1.13
LSG1-208ENST00000480853 LAMB2P55268 1798 aa22.1■■□□□ 1.13
LSG1-208ENST00000480853 ANKRD36CQ5JPF3 1778 aa22.1■■□□□ 1.13
LSG1-208ENST00000480853 ITGBL1O95965 494 aaPredicted RBP22.09■■□□□ 1.13
LSG1-208ENST00000480853 ANKRD13DQ6ZTN6 518 aa22.09■■□□□ 1.13
LSG1-208ENST00000480853 MKRN1Q9UHC7 482 aaKnown RBP22.09■■□□□ 1.13
LSG1-208ENST00000480853 ATP6V0A2Q9Y487 856 aa22.09■■□□□ 1.13
LSG1-208ENST00000480853 COL13A1Q5TAT6 717 aaPredicted RBP22.08■■□□□ 1.13
LSG1-208ENST00000480853 GPC2Q8N158 579 aa22.08■■□□□ 1.13
LSG1-208ENST00000480853 PLBD2Q8NHP8 589 aa22.08■■□□□ 1.13
LSG1-208ENST00000480853 PASKQ96RG2 1323 aa22.07■■□□□ 1.12
LSG1-208ENST00000480853 EIF6P56537 245 aaKnown RBP22.07■■□□□ 1.12
LSG1-208ENST00000480853 AOC3Q16853 763 aa22.07■■□□□ 1.12
LSG1-208ENST00000480853 RTL5Q5HYW3 569 aaPredicted RBP22.07■■□□□ 1.12
LSG1-208ENST00000480853 MAP1SQ66K74 1059 aaPredicted RBP22.07■■□□□ 1.12
LSG1-208ENST00000480853 FAM89AQ96GI7 184 aa22.07■■□□□ 1.12
LSG1-208ENST00000480853 ISCA1Q9BUE6 129 aa22.07■■□□□ 1.12
LSG1-208ENST00000480853 PPIP5K2O43314 1243 aa22.06■■□□□ 1.12
LSG1-208ENST00000480853 EPS15P42566 896 aa22.06■■□□□ 1.12
LSG1-208ENST00000480853 PHAXQ9H814 394 aaKnown RBP22.06■■□□□ 1.12
LSG1-208ENST00000480853 DBF4Q9UBU7 674 aaPredicted RBP22.06■■□□□ 1.12
LSG1-208ENST00000480853 SH3TC1Q8TE82 1336 aa22.06■■□□□ 1.12
LSG1-208ENST00000480853 HOXB7P09629 217 aa22.05■■□□□ 1.12
LSG1-208ENST00000480853 SP8Q8IXZ3 490 aa22.05■■□□□ 1.12
LSG1-208ENST00000480853 C8orf58Q8NAV2 365 aa22.05■■□□□ 1.12
LSG1-208ENST00000480853 CREBZFQ9NS37 354 aa22.05■■□□□ 1.12
LSG1-208ENST00000480853 LTBP1Q14766 1721 aa22.05■■□□□ 1.12
LSG1-208ENST00000480853 BBOX1O75936 387 aa22.04■■□□□ 1.12
LSG1-208ENST00000480853 FMR1Q06787 632 aaKnown RBP eCLIP22.04■■□□□ 1.12
LSG1-208ENST00000480853 HSPA1AP0DMV8 641 aaKnown RBP22.03■■□□□ 1.12
LSG1-208ENST00000480853 HSPA1BP0DMV9 641 aaKnown RBP22.03■■□□□ 1.12
LSG1-208ENST00000480853 SCNN1DP51172 638 aa22.03■■□□□ 1.12
LSG1-208ENST00000480853 GRIPAP1Q4V328 841 aa22.03■■□□□ 1.12
LSG1-208ENST00000480853 DDX46Q7L014 1031 aaKnown RBP22.03■■□□□ 1.12
LSG1-208ENST00000480853 NIM1KQ8IY84 436 aa22.03■■□□□ 1.12
LSG1-208ENST00000480853 CNTROBQ8N137 903 aa22.03■■□□□ 1.12
LSG1-208ENST00000480853 MPNDQ8N594 471 aa22.03■■□□□ 1.12
LSG1-208ENST00000480853 HYPKQ9NX55 129 aa22.03■■□□□ 1.12
LSG1-208ENST00000480853 GRAPQ13588 217 aa22.02■■□□□ 1.12
LSG1-208ENST00000480853 GRAPLQ8TC17 118 aaPredicted RBP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms