RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 MAK16Q9BXY0 300 aaKnown RBP10.26□□□□□ -0.77
TTC3-216ENST00000479930 KLF15Q9UIH9 416 aa10.26□□□□□ -0.77
TTC3-216ENST00000479930 OTUD7BQ6GQQ9 843 aa10.26□□□□□ -0.77
TTC3-216ENST00000479930 POLIQ9UNA4 740 aa10.26□□□□□ -0.77
TTC3-216ENST00000479930 GIPC1O14908 333 aa10.26□□□□□ -0.77
TTC3-216ENST00000479930 USP25Q9UHP3 1055 aa10.26□□□□□ -0.77
TTC3-216ENST00000479930 SPA17Q15506 151 aa10.26□□□□□ -0.77
TTC3-216ENST00000479930 ZCCHC6Q5VYS8 1495 aaKnown RBP10.26□□□□□ -0.77
TTC3-216ENST00000479930 TDRD12Q587J7 1177 aaKnown RBP10.26□□□□□ -0.77
TTC3-216ENST00000479930 GSTA5Q7RTV2 222 aa10.26□□□□□ -0.77
TTC3-216ENST00000479930 RIOK1Q9BRS2 568 aaKnown RBP10.26□□□□□ -0.77
TTC3-216ENST00000479930 IFIT1P09914 478 aaKnown RBP10.25□□□□□ -0.77
TTC3-216ENST00000479930 CCDC6Q16204 474 aa10.25□□□□□ -0.77
TTC3-216ENST00000479930 ZBBXA8MT70 800 aa10.25□□□□□ -0.77
TTC3-216ENST00000479930 IQCEQ6IPM2 695 aa10.25□□□□□ -0.77
TTC3-216ENST00000479930 FEZ2Q9UHY8 353 aaPredicted RBP10.25□□□□□ -0.77
TTC3-216ENST00000479930 LUZP1Q86V48 1076 aa10.25□□□□□ -0.77
TTC3-216ENST00000479930 ANKLE2Q86XL3 938 aa10.25□□□□□ -0.77
TTC3-216ENST00000479930 NEUROD4Q9HD90 331 aa10.25□□□□□ -0.77
TTC3-216ENST00000479930 NOP56O00567 594 aaKnown RBP10.25□□□□□ -0.77
TTC3-216ENST00000479930 JMYQ8N9B5 988 aa10.25□□□□□ -0.77
TTC3-216ENST00000479930 BCS1LQ9Y276 419 aa10.25□□□□□ -0.77
TTC3-216ENST00000479930 DPYDQ12882 1025 aa10.25□□□□□ -0.77
TTC3-216ENST00000479930 PNMA8AQ86V59 439 aaPredicted RBP10.25□□□□□ -0.77
TTC3-216ENST00000479930 RAB34Q9BZG1 259 aa10.25□□□□□ -0.77
TTC3-216ENST00000479930 KIAA1524Q8TCG1 905 aa10.24□□□□□ -0.77
TTC3-216ENST00000479930 BZW2Q9Y6E2 419 aaKnown RBP10.24□□□□□ -0.77
TTC3-216ENST00000479930 TAOK3Q9H2K8 898 aa10.24□□□□□ -0.77
TTC3-216ENST00000479930 LBHD1Q9BQE6 289 aaPredicted RBP10.24□□□□□ -0.77
TTC3-216ENST00000479930 TRAIPQ9BWF2 469 aa10.24□□□□□ -0.77
TTC3-216ENST00000479930 FTOQ9C0B1 505 aaKnown RBP eCLIP10.24□□□□□ -0.77
TTC3-216ENST00000479930 MED10Q9BTT4 135 aa10.24□□□□□ -0.77
TTC3-216ENST00000479930 ZNF654Q8IZM8 581 aa10.24□□□□□ -0.77
TTC3-216ENST00000479930 NAP1L4Q99733 375 aaKnown RBP10.24□□□□□ -0.77
TTC3-216ENST00000479930 PKD2L1Q9P0L9 805 aa10.24□□□□□ -0.77
TTC3-216ENST00000479930 HSP90AA5PQ58FG0 334 aa10.24□□□□□ -0.77
TTC3-216ENST00000479930 CFAP157Q5JU67 520 aa10.24□□□□□ -0.77
TTC3-216ENST00000479930 ZNF449Q6P9G9 518 aa10.24□□□□□ -0.77
TTC3-216ENST00000479930 HAUS2Q9NVX0 235 aa10.24□□□□□ -0.77
TTC3-216ENST00000479930 FAM95CA0A1B0GW59 222 aa10.23□□□□□ -0.77
TTC3-216ENST00000479930 CALM1P0DP23 149 aa10.23□□□□□ -0.77
TTC3-216ENST00000479930 CALM2P0DP24 149 aa10.23□□□□□ -0.77
TTC3-216ENST00000479930 CALM3P0DP25 149 aa10.23□□□□□ -0.77
TTC3-216ENST00000479930 CCDC30Q5VVM6 783 aa10.23□□□□□ -0.77
TTC3-216ENST00000479930 ABI1Q8IZP0 508 aa10.23□□□□□ -0.77
TTC3-216ENST00000479930 TSPYL2Q9H2G4 693 aaPredicted RBP10.23□□□□□ -0.77
TTC3-216ENST00000479930 HNRNPCL2B2RXH8 293 aa10.23□□□□□ -0.77
TTC3-216ENST00000479930 HNRNPCL1O60812 293 aaKnown RBP10.23□□□□□ -0.77
TTC3-216ENST00000479930 NOP14P78316 857 aaKnown RBP10.23□□□□□ -0.77
TTC3-216ENST00000479930 ANKRD35Q8N283 1001 aa10.23□□□□□ -0.77
TTC3-216ENST00000479930 PGBD3Q8N328 593 aa10.23□□□□□ -0.77
TTC3-216ENST00000479930 LIMCH1Q9UPQ0 1083 aa10.23□□□□□ -0.77
TTC3-216ENST00000479930 TBCAO75347 108 aaKnown RBP10.23□□□□□ -0.77
TTC3-216ENST00000479930 TBC1D31Q96DN5 1066 aa10.23□□□□□ -0.77
TTC3-216ENST00000479930 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.23□□□□□ -0.77
TTC3-216ENST00000479930 CCDC40Q4G0X9 1142 aa10.23□□□□□ -0.77
TTC3-216ENST00000479930 ZNF692Q9BU19 519 aaPredicted RBP10.23□□□□□ -0.77
TTC3-216ENST00000479930 CEP126Q9P2H0 1117 aa10.23□□□□□ -0.77
TTC3-216ENST00000479930 ITKQ08881 620 aa10.22□□□□□ -0.77
TTC3-216ENST00000479930 ME1P48163 572 aa10.22□□□□□ -0.77
TTC3-216ENST00000479930 GNAI1P63096 354 aa10.22□□□□□ -0.77
TTC3-216ENST00000479930 ARHGEF1Q92888 912 aaKnown RBP10.22□□□□□ -0.77
TTC3-216ENST00000479930 KRT23Q9C075 422 aa10.22□□□□□ -0.77
TTC3-216ENST00000479930 SLC5A4Q9NY91 659 aa10.22□□□□□ -0.77
TTC3-216ENST00000479930 TRMT112Q9UI30 125 aaKnown RBP10.22□□□□□ -0.77
TTC3-216ENST00000479930 RCAN3Q9UKA8 241 aa10.22□□□□□ -0.77
TTC3-216ENST00000479930 CCP110O43303 1012 aa10.22□□□□□ -0.77
TTC3-216ENST00000479930 KIF5BP33176 963 aa10.22□□□□□ -0.77
TTC3-216ENST00000479930 FASTKD5Q7L8L6 764 aaKnown RBP10.22□□□□□ -0.77
TTC3-216ENST00000479930 CCDC50Q8IVM0 306 aa10.22□□□□□ -0.77
TTC3-216ENST00000479930 PRDM5Q9NQX1 630 aaPredicted RBP10.22□□□□□ -0.77
TTC3-216ENST00000479930 CNOT7Q9UIV1 285 aaKnown RBP10.22□□□□□ -0.77
TTC3-216ENST00000479930 IRX5P78411 483 aaPredicted RBP10.22□□□□□ -0.77
TTC3-216ENST00000479930 WHAMMQ8TF30 809 aa10.22□□□□□ -0.77
TTC3-216ENST00000479930 SYNDIG1LA6NDD5 238 aa10.22□□□□□ -0.77
TTC3-216ENST00000479930 GRXCR2A6NFK2 248 aa10.22□□□□□ -0.77
TTC3-216ENST00000479930 MUM1L1Q5H9M0 696 aa10.22□□□□□ -0.77
TTC3-216ENST00000479930 PIK3R5Q8WYR1 880 aa10.22□□□□□ -0.77
TTC3-216ENST00000479930 SYTL2Q9HCH5 934 aa10.22□□□□□ -0.77
TTC3-216ENST00000479930 NEK4P51957 841 aa10.22□□□□□ -0.77
TTC3-216ENST00000479930 NBPF6Q5VWK0 638 aa10.22□□□□□ -0.77
TTC3-216ENST00000479930 NBPF5PQ86XG9 351 aaPredicted RBP10.22□□□□□ -0.77
TTC3-216ENST00000479930 NBPF4Q96M43 638 aa10.22□□□□□ -0.77
TTC3-216ENST00000479930 MARCKSP29966 332 aaPredicted RBP10.21□□□□□ -0.77
TTC3-216ENST00000479930 CHST3Q7LGC8 479 aa10.21□□□□□ -0.77
TTC3-216ENST00000479930 SMARCC2Q8TAQ2 1214 aa10.21□□□□□ -0.77
TTC3-216ENST00000479930 CACNA1FO60840 1977 aa10.21□□□□□ -0.77
TTC3-216ENST00000479930 PLCB3Q01970 1234 aa10.21□□□□□ -0.77
TTC3-216ENST00000479930 SPECC1Q5M775 1068 aa10.21□□□□□ -0.77
TTC3-216ENST00000479930 HIP1O00291 1037 aa10.21□□□□□ -0.77
TTC3-216ENST00000479930 ARPP19P56211 112 aa10.21□□□□□ -0.77
TTC3-216ENST00000479930 NLRP13Q86W25 1043 aa10.21□□□□□ -0.77
TTC3-216ENST00000479930 CCDC148Q8NFR7 591 aa10.21□□□□□ -0.77
TTC3-216ENST00000479930 FBF1Q8TES7 1133 aa10.21□□□□□ -0.77
TTC3-216ENST00000479930 COG6Q9Y2V7 657 aa10.21□□□□□ -0.77
TTC3-216ENST00000479930 BAG6P46379 1132 aa10.21□□□□□ -0.78
TTC3-216ENST00000479930 HS6ST3Q8IZP7 471 aa10.21□□□□□ -0.78
TTC3-216ENST00000479930 PIDD1Q9HB75 910 aa10.21□□□□□ -0.78
TTC3-216ENST00000479930 CEP131Q9UPN4 1083 aa10.21□□□□□ -0.78
TTC3-216ENST00000479930 ROCK1Q13464 1354 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms