RNA–Protein interactions for RNA: ENST00000479916.1

AP4M1-215, Transcript of adaptor related protein complex 4 subunit mu 1, human

TSL 3

Gene AP4M1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AP4M1-215	ENST00000479916	SYNE4	Q8N205	404 aa		11.28	□□□□□ -0.6
AP4M1-215	ENST00000479916	ERBB4	Q15303	1308 aa		11.28	□□□□□ -0.6
AP4M1-215	ENST00000479916	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.28	□□□□□ -0.6
AP4M1-215	ENST00000479916	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.28	□□□□□ -0.6
AP4M1-215	ENST00000479916	ADAMTSL1	Q8N6G6	1762 aa		11.27	□□□□□ -0.61
AP4M1-215	ENST00000479916	TRIM35	Q9UPQ4	493 aa		11.27	□□□□□ -0.61
AP4M1-215	ENST00000479916	RIC1	Q4ADV7	1423 aa		11.26	□□□□□ -0.61
AP4M1-215	ENST00000479916	LTBP1	Q14766	1721 aa		11.26	□□□□□ -0.61
AP4M1-215	ENST00000479916	TCERG1	O14776	1098 aa	Known RBP	11.26	□□□□□ -0.61
AP4M1-215	ENST00000479916	HOXA10	P31260	410 aa	Predicted RBP	11.26	□□□□□ -0.61
AP4M1-215	ENST00000479916	IARS	P41252	1262 aa	Known RBP	11.26	□□□□□ -0.61
AP4M1-215	ENST00000479916	CHADL	Q6NUI6	762 aa		11.26	□□□□□ -0.61
AP4M1-215	ENST00000479916	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.26	□□□□□ -0.61
AP4M1-215	ENST00000479916	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.26	□□□□□ -0.61
AP4M1-215	ENST00000479916	BABAM1	Q9NWV8	329 aa		11.26	□□□□□ -0.61
AP4M1-215	ENST00000479916	DDX60	Q8IY21	1712 aa	Known RBP	11.26	□□□□□ -0.61
AP4M1-215	ENST00000479916	FZD9	O00144	591 aa		11.25	□□□□□ -0.61
AP4M1-215	ENST00000479916	CHL1	O00533	1208 aa		11.25	□□□□□ -0.61
AP4M1-215	ENST00000479916	LMOD3	Q0VAK6	560 aa		11.25	□□□□□ -0.61
AP4M1-215	ENST00000479916	AIMP1	Q12904	312 aa	Known RBP	11.25	□□□□□ -0.61
AP4M1-215	ENST00000479916	COPS6	Q7L5N1	327 aa		11.25	□□□□□ -0.61
AP4M1-215	ENST00000479916	XAGE3	Q8WTP9	111 aa		11.25	□□□□□ -0.61
AP4M1-215	ENST00000479916	RPGR	Q92834	1020 aa	Known RBP	11.25	□□□□□ -0.61
AP4M1-215	ENST00000479916	ZNF428	Q96B54	188 aa		11.25	□□□□□ -0.61
AP4M1-215	ENST00000479916	RUNDC1	Q96C34	613 aa		11.25	□□□□□ -0.61
AP4M1-215	ENST00000479916	PSMD1	Q99460	953 aa		11.25	□□□□□ -0.61
AP4M1-215	ENST00000479916	ADAMTS8	Q9UP79	889 aa		11.25	□□□□□ -0.61
AP4M1-215	ENST00000479916	LAS1L	Q9Y4W2	734 aa	Known RBP	11.25	□□□□□ -0.61
AP4M1-215	ENST00000479916	IQCA1L	A6NCM1	817 aa		11.24	□□□□□ -0.61
AP4M1-215	ENST00000479916	PPP1R42	Q7Z4L9	355 aa		11.24	□□□□□ -0.61
AP4M1-215	ENST00000479916	RBM17	Q96I25	401 aa	Known RBP	11.24	□□□□□ -0.61
AP4M1-215	ENST00000479916	CRAMP1	Q96RY5	1269 aa		11.24	□□□□□ -0.61
AP4M1-215	ENST00000479916	UTP14A	Q9BVJ6	771 aa	Known RBP	11.24	□□□□□ -0.61
AP4M1-215	ENST00000479916	PPEF1	O14829	653 aa	Predicted RBP	11.23	□□□□□ -0.61
AP4M1-215	ENST00000479916	WDR43	Q15061	677 aa	Known RBP eCLIP	11.23	□□□□□ -0.61
AP4M1-215	ENST00000479916	PARP10	Q53GL7	1025 aa		11.23	□□□□□ -0.61
AP4M1-215	ENST00000479916	EAPP	Q56P03	285 aa	Predicted RBP	11.23	□□□□□ -0.61
AP4M1-215	ENST00000479916	SLC10A5	Q5PT55	438 aa		11.23	□□□□□ -0.61
AP4M1-215	ENST00000479916	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.23	□□□□□ -0.61
AP4M1-215	ENST00000479916	LDHD	Q86WU2	507 aa		11.23	□□□□□ -0.61
AP4M1-215	ENST00000479916	RNF123	Q5XPI4	1314 aa		11.23	□□□□□ -0.61
AP4M1-215	ENST00000479916	TRPM7	Q96QT4	1865 aa		11.23	□□□□□ -0.61
AP4M1-215	ENST00000479916	ABCC4	O15439	1325 aa		11.22	□□□□□ -0.61
AP4M1-215	ENST00000479916	HCLS1	P14317	486 aa	Predicted RBP	11.22	□□□□□ -0.61
AP4M1-215	ENST00000479916	POLR2A	P24928	1970 aa	Known RBP	11.22	□□□□□ -0.61
AP4M1-215	ENST00000479916	EPHX2	P34913	555 aa		11.22	□□□□□ -0.61
AP4M1-215	ENST00000479916	TCIRG1	Q13488	830 aa		11.22	□□□□□ -0.61
AP4M1-215	ENST00000479916	CC2D2B	Q6DHV5	1058 aa		11.22	□□□□□ -0.61
AP4M1-215	ENST00000479916	NLRP10	Q86W26	655 aa		11.22	□□□□□ -0.61
AP4M1-215	ENST00000479916	NLRP3	Q96P20	1036 aa		11.22	□□□□□ -0.61
AP4M1-215	ENST00000479916	PASK	Q96RG2	1323 aa		11.22	□□□□□ -0.61
AP4M1-215	ENST00000479916	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
AP4M1-215	ENST00000479916	CHPF2	Q9P2E5	772 aa		11.22	□□□□□ -0.61
AP4M1-215	ENST00000479916	HACL1	Q9UJ83	578 aa		11.22	□□□□□ -0.61
AP4M1-215	ENST00000479916	COL4A1	P02462	1669 aa		11.21	□□□□□ -0.61
AP4M1-215	ENST00000479916	ITGBL1	O95965	494 aa	Predicted RBP	11.21	□□□□□ -0.61
AP4M1-215	ENST00000479916	HSPA1A	P0DMV8	641 aa	Known RBP	11.21	□□□□□ -0.61
AP4M1-215	ENST00000479916	HSPA1B	P0DMV9	641 aa	Known RBP	11.21	□□□□□ -0.61
AP4M1-215	ENST00000479916	GPC2	Q8N158	579 aa		11.21	□□□□□ -0.61
AP4M1-215	ENST00000479916	JDP2	Q8WYK2	163 aa		11.21	□□□□□ -0.61
AP4M1-215	ENST00000479916	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.21	□□□□□ -0.61
AP4M1-215	ENST00000479916	CREBZF	Q9NS37	354 aa		11.21	□□□□□ -0.61
AP4M1-215	ENST00000479916	MKRN1	Q9UHC7	482 aa	Known RBP	11.21	□□□□□ -0.61
AP4M1-215	ENST00000479916	AOC3	Q16853	763 aa		11.2	□□□□□ -0.62
AP4M1-215	ENST00000479916	HDGFL1	Q5TGJ6	251 aa		11.2	□□□□□ -0.62
AP4M1-215	ENST00000479916	MAP1S	Q66K74	1059 aa	Predicted RBP	11.2	□□□□□ -0.62
AP4M1-215	ENST00000479916	LARGE2	Q8N3Y3	721 aa		11.2	□□□□□ -0.62
AP4M1-215	ENST00000479916	CLEC11A	Q9Y240	323 aa		11.2	□□□□□ -0.62
AP4M1-215	ENST00000479916	ATP6V0A2	Q9Y487	856 aa		11.2	□□□□□ -0.62
AP4M1-215	ENST00000479916	GJA3	Q9Y6H8	435 aa		11.2	□□□□□ -0.62
AP4M1-215	ENST00000479916	LRRC37A	A6NMS7	1700 aa		11.19	□□□□□ -0.62
AP4M1-215	ENST00000479916	EPS15	P42566	896 aa		11.19	□□□□□ -0.62
AP4M1-215	ENST00000479916	SCNN1D	P51172	638 aa		11.19	□□□□□ -0.62
AP4M1-215	ENST00000479916	EIF6	P56537	245 aa	Known RBP	11.19	□□□□□ -0.62
AP4M1-215	ENST00000479916	HSP90AB3P	Q58FF7	597 aa		11.19	□□□□□ -0.62
AP4M1-215	ENST00000479916	DUSP27	Q5VZP5	1158 aa		11.19	□□□□□ -0.62
AP4M1-215	ENST00000479916	CFAP44	Q96MT7	982 aa		11.19	□□□□□ -0.62
AP4M1-215	ENST00000479916	MBIP	Q9NS73	344 aa		11.19	□□□□□ -0.62
AP4M1-215	ENST00000479916	TRMT112	Q9UI30	125 aa	Known RBP	11.19	□□□□□ -0.62
AP4M1-215	ENST00000479916	SH3TC1	Q8TE82	1336 aa		11.18	□□□□□ -0.62
AP4M1-215	ENST00000479916	ATP5J2-PTCD1	G3V325	749 aa		11.18	□□□□□ -0.62
AP4M1-215	ENST00000479916	APAF1	O14727	1248 aa		11.18	□□□□□ -0.62
AP4M1-215	ENST00000479916	PPIP5K2	O43314	1243 aa		11.18	□□□□□ -0.62
AP4M1-215	ENST00000479916	ZNF853	P0CG23	659 aa		11.18	□□□□□ -0.62
AP4M1-215	ENST00000479916	FMR1	Q06787	632 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
AP4M1-215	ENST00000479916	GRIPAP1	Q4V328	841 aa		11.18	□□□□□ -0.62
AP4M1-215	ENST00000479916	ANKRD13D	Q6ZTN6	518 aa		11.18	□□□□□ -0.62
AP4M1-215	ENST00000479916	CNTROB	Q8N137	903 aa		11.18	□□□□□ -0.62
AP4M1-215	ENST00000479916	PLBD2	Q8NHP8	589 aa		11.18	□□□□□ -0.62
AP4M1-215	ENST00000479916	ISCA1	Q9BUE6	129 aa		11.18	□□□□□ -0.62
AP4M1-215	ENST00000479916	DUOX1	Q9NRD9	1551 aa		11.18	□□□□□ -0.62
AP4M1-215	ENST00000479916	CNTNAP1	P78357	1384 aa		11.17	□□□□□ -0.62
AP4M1-215	ENST00000479916	TMEM88B	A6NKF7	163 aa		11.17	□□□□□ -0.62
AP4M1-215	ENST00000479916	HOXB7	P09629	217 aa		11.17	□□□□□ -0.62
AP4M1-215	ENST00000479916	PNMA8A	Q86V59	439 aa	Predicted RBP	11.17	□□□□□ -0.62
AP4M1-215	ENST00000479916	SP8	Q8IXZ3	490 aa		11.17	□□□□□ -0.62
AP4M1-215	ENST00000479916	NIM1K	Q8IY84	436 aa		11.17	□□□□□ -0.62
AP4M1-215	ENST00000479916	FAM89A	Q96GI7	184 aa		11.17	□□□□□ -0.62
AP4M1-215	ENST00000479916	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.17	□□□□□ -0.62
AP4M1-215	ENST00000479916	DBF4	Q9UBU7	674 aa	Predicted RBP	11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 55 ms